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SwissProt blast output of UN12327


BLASTX 7.6.2

Query= UN12327 /QuerySize=1556
        (1555 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9T0J6|DUS3L_ARATH tRNA-dihydrouridine synthase 3-like OS=Ara...    145   9e-034
sp|Q7XT07|DUS3L_ORYSJ tRNA-dihydrouridine synthase 3-like OS=Ory...    129   9e-029
sp|Q6BS64|DUS3_DEBHA tRNA-dihydrouridine synthase 3 OS=Debaryomy...     64   4e-009
sp|Q5ALL3|DUS3_CANAL tRNA-dihydrouridine synthase 3 OS=Candida a...     63   5e-009
sp|A3LUK5|DUS3_PICST tRNA-dihydrouridine synthase 3 OS=Pichia st...     62   1e-008
sp|Q6C4K3|DUS3_YARLI tRNA-dihydrouridine synthase 3 OS=Yarrowia ...     62   1e-008
sp|A5DTS1|DUS3_LODEL tRNA-dihydrouridine synthase 3 OS=Lodderomy...     55   1e-006
sp|A7A1S5|DUS3_YEAS7 tRNA-dihydrouridine synthase 3 OS=Saccharom...     53   6e-006
sp|Q06053|DUS3_YEAST tRNA-dihydrouridine synthase 3 OS=Saccharom...     53   6e-006

>sp|Q9T0J6|DUS3L_ARATH tRNA-dihydrouridine synthase 3-like OS=Arabidopsis
        thaliana GN=At4g38890 PE=2 SV=1

          Length = 700

 Score =  145 bits (365), Expect = 9e-034
 Identities = 67/84 (79%), Positives = 74/84 (88%), Gaps = 3/84 (3%)
 Frame = +3

Query: 1182 INLCPQVSRTEDVDSCQYKEKCRFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGLSCRF 1361
            INLCPQV+RTEDVDSCQYK+KCRFNHDIEAFKAQK DDIEGQCPFVASGMKC YGLSCRF
Sbjct:  106 INLCPQVARTEDVDSCQYKDKCRFNHDIEAFKAQKADDIEGQCPFVASGMKCAYGLSCRF 165

Query: 1362 LGTHTHV---SDENQISEINVFNK 1424
            LG+H  +   SD+ + SE+N FNK
Sbjct:  166 LGSHRDITGNSDDKEKSEMNFFNK 189


 Score =  124 bits (311), Expect = 2e-027
 Identities = 68/89 (76%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +3

Query:  909 AELAAETSVKEDAKAVLETVQSTKQFSVYEASSEELIERSMAPIKKEFLCPPPPSRNLKQ 1088
            AE A +TSV+ DAKA L  VQSTKQFSVYEA+SEELIERSMAPIKKEFLCPPPPSR++KQ
Sbjct:    6 AEHAVDTSVEGDAKAAL-PVQSTKQFSVYEATSEELIERSMAPIKKEFLCPPPPSRSVKQ 64

Query: 1089 SD-VKAAPPHPSLVQEKKSKRQLKRERRE 1172
            +D      P   LVQEKKSKRQLKRERRE
Sbjct:   65 NDAADVRAPQSGLVQEKKSKRQLKRERRE 93

>sp|Q7XT07|DUS3L_ORYSJ tRNA-dihydrouridine synthase 3-like OS=Oryza sativa
        subsp. japonica GN=Os04g0117600 PE=2 SV=2

          Length = 685

 Score =  129 bits (322), Expect = 9e-029
 Identities = 71/147 (48%), Positives = 95/147 (64%), Gaps = 8/147 (5%)
 Frame = +3

Query: 1002 SSEELIERSMAPIKKEFLCPPPPSRNLKQSDVKAAPPHPSLVQEKKSKRQLKRERR--EK 1175
            S EEL+ R++AP+K  FL PP  +   K  D   A    ++V EKKSKRQLKRER+  +K
Sbjct:   30 SPEELVARAVAPVKPAFLRPPLSATPPK--DEGKANGGGAVVAEKKSKRQLKRERKQEQK 87

Query: 1176 CAINLCPQVSRTEDVDSCQYKEKCRFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGLSC 1355
             + +LC +V ++ +V SC+Y + CRF+HDI+A+ AQKP D+EG CPF      C YGL+C
Sbjct:   88 SSSHLCIEVGKSGNVSSCKYGDSCRFSHDIDAYLAQKPADLEGTCPFTNLDQLCPYGLTC 147

Query: 1356 RFLGTH--THVSDEN--QISEINVFNK 1424
            RFLGTH   H +  N  +  EIN  NK
Sbjct:  148 RFLGTHKDIHAASGNLSEKHEINALNK 174

>sp|Q6BS64|DUS3_DEBHA tRNA-dihydrouridine synthase 3 OS=Debaryomyces hansenii
        GN=DUS3 PE=3 SV=1

          Length = 622

 Score =  64 bits (153), Expect = 4e-009
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
 Frame = +3

Query: 1005 SEELIERSMAPIKKEFLCPPPPSRNLKQSDVKAAPPHPSLVQEKKSKRQLKRERREKCAI 1184
            +E ++E    P++++++         +Q +           + +  KR LK++  E   +
Sbjct:   39 AEFIVENPDVPVEEKYINDDEAEGGDRQEEEGGKGGKNKKRRGQNKKRDLKQQHEE---V 95

Query: 1185 NLCPQVSRTEDVDSCQY-KEKCRFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGLSCRF 1361
             LC  +   E+   C++  E CR +H++E + + KP+DIEG CP   +   C  GL CR+
Sbjct:   96 RLCSSLLDPENPKECRFGAENCRNSHNVEEYISSKPEDIEGNCPVYTAIGYCPAGLKCRW 155

Query: 1362 LGTH----TH--VSDENQISEINVFNKGKI 1433
            L +H    TH  + D  Q+      N  ++
Sbjct:  156 LHSHYNKETHKLLKDLEQVENAKALNNYEV 185

>sp|Q5ALL3|DUS3_CANAL tRNA-dihydrouridine synthase 3 OS=Candida albicans GN=DUS3
        PE=3 SV=1

          Length = 613

 Score =  63 bits (152), Expect = 5e-009
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +3

Query: 1116 PSLVQEKKSKRQLKRERREKCAINLCPQVSRTEDVDSCQY-KEKCRFNHDIEAFKAQKPD 1292
            P   +++K +   +  +++K  I LCP +   ED   CQ   +KCRF+HDI ++   KP 
Sbjct:   65 PRNKKKQKGQNHKRDLKQKKDIIKLCPSLIDPEDDRICQVGADKCRFHHDIASYLESKPQ 124

Query: 1293 DIEGQCPFVASGMKCQYGLSCRFLGTH 1373
            DI+G CP   +   C  G+ CR+L +H
Sbjct:  125 DIDGICPVFEALGYCPTGIKCRWLKSH 151

>sp|A3LUK5|DUS3_PICST tRNA-dihydrouridine synthase 3 OS=Pichia stipitis GN=DUS3
        PE=3 SV=1

          Length = 613

 Score =  62 bits (149), Expect = 1e-008
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
 Frame = +3

Query: 1134 KKSKRQLKRERREKCAINLCPQVSRTEDVDSCQY-KEKCRFNHDIEAFKAQKPDDIEGQC 1310
            +   R LK++R E   I LC  +   +++ +C Y  E+CR  H++E + A KP DIEG C
Sbjct:   72 QNKNRDLKQKREE---IRLCTSLLDPDNIKTCAYGPEQCRSTHNVEEYLASKPVDIEGIC 128

Query: 1311 PFVASGMKCQYGLSCRFLGTHTHVSDENQISEINVFNKGKI 1433
            P   +   C  GL CR+L +H        I ++      KI
Sbjct:  129 PVFRAIGYCPAGLKCRWLQSHYDKETRKLIKDLGRTEASKI 169

>sp|Q6C4K3|DUS3_YARLI tRNA-dihydrouridine synthase 3 OS=Yarrowia lipolytica
        GN=DUS3 PE=3 SV=1

          Length = 622

 Score =  62 bits (148), Expect = 1e-008
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = +3

Query: 1065 PPSRNLKQSDVKAAPPHPSLVQEKKSKRQLKRE--RREKCAINLCPQVSRTEDVDS---C 1229
            PPS N    D+      P   +EKK   Q K    ++ K AI +C    + ++  S   C
Sbjct:   56 PPSVN---DDLAEGGEKP---EEKKKGGQNKNRSLKQRKDAIKMCSSALQFKEDGSPQEC 109

Query: 1230 QYKEKCRFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGLSCRFLGTH 1373
             Y +KC+F HD++ +   KP DIEG CP      +C  G  CR+L +H
Sbjct:  110 SYGDKCKFEHDLQKYLESKPKDIEGVCPVFDLTGQCPQGYKCRWLSSH 157

>sp|A5DTS1|DUS3_LODEL tRNA-dihydrouridine synthase 3 OS=Lodderomyces
        elongisporus GN=DUS3 PE=3 SV=1

          Length = 642

 Score =  55 bits (131), Expect = 1e-006
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
 Frame = +3

Query: 1179 AINLCPQVSRTEDVD---SCQYKEKCRFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGL 1349
            A+ LC  +   ED D   +    E C+++H+IE + A K DDIEG CP   +   C  GL
Sbjct:  101 AVRLCMVMIDPEDDDTKCAAGGAENCKYSHNIEEYLAAKSDDIEGTCPVYEALGYCPSGL 160

Query: 1350 SCRFLGTHTHVSDENQISEINVFNKGK 1430
             CR+L +H +   +  I ++    + K
Sbjct:  161 KCRWLHSHYNKETKKLIKDLEKLEREK 187

>sp|A7A1S5|DUS3_YEAS7 tRNA-dihydrouridine synthase 3 OS=Saccharomyces cerevisiae
        (strain YJM789) GN=DUS3 PE=3 SV=1

          Length = 668

 Score =  53 bits (125), Expect = 6e-006
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
 Frame = +3

Query: 1131 EKKSKRQLKRERREKCAINLCPQVSRTEDVDSCQYKEKCRFNHDIEAFKAQKPDDIEG-- 1304
            +K+ + + +  R+ K    LCP++    D+  C + + CRF HDI  + + K  ++E   
Sbjct:   78 KKRGQNKNRDNRQVKEQNVLCPRLIH-GDISKCSFGDNCRFVHDINLYLSTKKPEVESNI 136

Query: 1305 --QCPFVASGMKCQYGLSCRFLGTHTHVSDENQISE 1406
               CP   S   C  G  CRFL +H +  D   IS+
Sbjct:  137 FPSCPVFNSLGFCPMGFKCRFLSSHLNKEDNILISK 172

>sp|Q06053|DUS3_YEAST tRNA-dihydrouridine synthase 3 OS=Saccharomyces cerevisiae
        GN=DUS3 PE=1 SV=2

          Length = 668

 Score =  53 bits (125), Expect = 6e-006
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
 Frame = +3

Query: 1131 EKKSKRQLKRERREKCAINLCPQVSRTEDVDSCQYKEKCRFNHDIEAFKAQKPDDIEG-- 1304
            +K+ + + +  R+ K    LCP++    D+  C + + CRF HDI  + + K  ++E   
Sbjct:   78 KKRGQNKNRDNRQVKEQNVLCPRLIH-GDISKCSFGDNCRFVHDINLYLSTKKPEVESNI 136

Query: 1305 --QCPFVASGMKCQYGLSCRFLGTHTHVSDENQISE 1406
               CP   S   C  G  CRFL +H +  D   IS+
Sbjct:  137 FPSCPVFNSLGFCPMGFKCRFLSSHLNKEDNILISK 172

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,796,540,212
Number of Sequences: 518415
Number of Extensions: 51796540212
Number of Successful Extensions: 358348623
Number of sequences better than 0.0: 0