BLASTX 7.6.2
Query= UN12331 /QuerySize=811
(810 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A0LGZ0|RLME_SYNFM Ribosomal RNA large subunit methyltransfera... 97 9e-020
sp|Q58771|RLME_METJA Ribosomal RNA large subunit methyltransfera... 91 8e-018
sp|Q18E61|RLME_HALWD Ribosomal RNA large subunit methyltransfera... 91 1e-017
sp|Q1H387|RLME_METFK Ribosomal RNA large subunit methyltransfera... 82 4e-015
sp|Q2W0P2|RLME_MAGSA Ribosomal RNA large subunit methyltransfera... 82 5e-015
sp|O27801|RLME_METTH Ribosomal RNA large subunit methyltransfera... 80 1e-014
sp|B8FL12|RLME_DESAA Ribosomal RNA large subunit methyltransfera... 80 2e-014
sp|A8ZT18|RLME_DESOH Ribosomal RNA large subunit methyltransfera... 79 2e-014
sp|B7GY18|RLME_ACIB3 Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|B7I636|RLME_ACIB5 Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|B2HXD3|RLME_ACIBC Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|B0VSM4|RLME_ACIBS Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|A3M851|RLME_ACIBT Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|B0VEE9|RLME_ACIBY Ribosomal RNA large subunit methyltransfera... 76 3e-013
sp|O62251|RRMJ2_CAEEL Putative ribosomal RNA methyltransferase F... 75 4e-013
sp|Q0A769|RLME_ALHEH Ribosomal RNA large subunit methyltransfera... 74 8e-013
sp|Q6F8N1|RLME_ACIAD Ribosomal RNA large subunit methyltransfera... 73 2e-012
sp|C0QGP2|RLME_DESAH Ribosomal RNA large subunit methyltransfera... 73 2e-012
sp|Q8TR92|RLME_METAC Ribosomal RNA large subunit methyltransfera... 73 2e-012
sp|Q8PUP4|RLME_METMA Ribosomal RNA large subunit methyltransfera... 73 2e-012
>sp|A0LGZ0|RLME_SYNFM Ribosomal RNA large subunit methyltransferase E
OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmE PE=3
SV=1
Length = 197
Score = 97 bits (241), Expect = 9e-020
Identities = 60/141 (42%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
Frame = +3
Query: 18 VPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLR 197
V D ++ +A++ Y+AR+ +KL +IQ +YK++KPG+ VLDLG APG+W+Q A + +GP
Sbjct: 5 VRDHYFHKAKKEHYLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGP-- 62
Query: 198 SGGNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVT 377
G VVG+D+K V+ V + DV + + R LS +H F VVLSDM S +
Sbjct: 63 -SGLVVGVDLKGVE--HRFPEGVVVLQGDVTD--PELARSLSVEHGPFDVVLSDMAPSTS 117
Query: 378 GITSRDAALSAELGMRALNLA 440
GI D+A SA L AL +A
Sbjct: 118 GIRVADSARSALLFESALEMA 138
>sp|Q58771|RLME_METJA Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus jannaschii GN=rlmE PE=3 SV=1
Length = 245
Score = 91 bits (224), Expect = 8e-018
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 7/141 (4%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
DF+Y+ A++L Y +R++FKL+Q+ +++ +IKPG VLDLGCAPG W+QVA + +G
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 71
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISAD-VLNFPRQNIRELSP-QHMGFSVVLSDMCHSVT 377
G V+G+D++ VK P V I D L IREL P VV+SD +++
Sbjct: 72 GFVIGIDLQPVK--PFEYDNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNIS 129
Query: 378 GITSRDAALSAELGMRALNLA 440
G D A S +L AL +A
Sbjct: 130 GYWDIDHARSIDLVTTALQIA 150
>sp|Q18E61|RLME_HALWD Ribosomal RNA large subunit methyltransferase E
OS=Haloquadratum walsbyi (strain DSM 16790) GN=rlmE PE=3 SV=1
Length = 256
Score = 91 bits (223), Expect = 1e-017
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D +Y A++ GY RSA+KL QI + PG++V+DLG APG WLQVA +++GP
Sbjct: 5 DEYYNRAKQEGYRTRSAYKLQQIDADAGVFGPGNTVIDLGAAPGGWLQVAAEAVGP---S 61
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVTGI 383
G V+G+D ++++ L V TI D+ + +N + +VVLSDM ++TG
Sbjct: 62 GTVIGVDFQRIR--DLESDIVDTIRGDMTDESTKNALRKRVNNSSVNVVLSDMAPNMTGE 119
Query: 384 TSRDAALSAELGMRALNLA 440
S D A S L +A ++A
Sbjct: 120 YSVDHARSVHLARQAFSVA 138
>sp|Q1H387|RLME_METFK Ribosomal RNA large subunit methyltransferase E
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)
GN=rlmE PE=3 SV=1
Length = 207
Score = 82 bits (201), Expect = 4e-015
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Frame = +3
Query: 18 VPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLR 197
V D F + AQR GY AR+A+KLL+I + +LIKPG +++DLG APG+W QVA Q L
Sbjct: 15 VNDEFVKRAQRDGYRARAAYKLLEIDDKDQLIKPGMTIVDLGSAPGSWSQVAVQRLA--- 71
Query: 198 SGGNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVT 377
G V+ +DI +++PP+ V+ I D + E S +V++DM +++
Sbjct: 72 GQGRVIALDI--LEMPPI--PGVEFIQGDFREEEILLVLEKSLNGKPVDLVIADMAPNIS 127
Query: 378 GITSRDAALSAELGMRALNLA 440
GI+ D A +A L AL +
Sbjct: 128 GISDVDQARAAYLVELALEFS 148
>sp|Q2W0P2|RLME_MAGSA Ribosomal RNA large subunit methyltransferase E
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rlmE
PE=3 SV=1
Length = 244
Score = 82 bits (200), Expect = 5e-015
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPL--R 197
D + EA+RLGY +R+AFK++Q+ +++ ++KPG V+DLG APG W QVA + +G L +
Sbjct: 48 DPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAAPGGWTQVAVEKVGALKPK 107
Query: 198 SGGNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMG--FSVVLSDMCHS 371
GG VVGMDI ++ PL A T+ D F + + + +G VVLSDM
Sbjct: 108 GGGKVVGMDI--LEWDPLPGA--ITLQGD---FLADDAPDRLKEALGGPADVVLSDMAAP 160
Query: 372 VTGITSRD 395
TG S D
Sbjct: 161 TTGHPSTD 168
>sp|O27801|RLME_METTH Ribosomal RNA large subunit methyltransferase E
OS=Methanobacterium thermoautotrophicum GN=rlmE PE=3 SV=1
Length = 211
Score = 80 bits (196), Expect = 1e-014
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D +YR A++ Y +R+++KLLQ+ +YKLIK G VLDLG APG W QVA +G
Sbjct: 12 DHYYRSAKKENYRSRASYKLLQLNNKYKLIKKGDRVLDLGAAPGGWSQVALDKVG---EE 68
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVTGI 383
G VV +D++++K P + R + IREL + VV+SD S++GI
Sbjct: 69 GLVVAVDLQRIKGFPAENFRAIRGDFTDPEVKDKIIRELGGR---ADVVISDAAPSLSGI 125
Query: 384 TSRDAALSAELGMRALNLA 440
D S +L L++A
Sbjct: 126 RDIDHLRSVDLVENVLDIA 144
>sp|B8FL12|RLME_DESAA Ribosomal RNA large subunit methyltransferase E
OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rlmE PE=3 SV=1
Length = 207
Score = 80 bits (195), Expect = 2e-014
Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D + +AQ+ G+ ARS FKL ++QK++K+++PG VLDLGCAPG+WL+ A Q +G
Sbjct: 13 DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 69
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIREL 320
G V+G+D+K + P +A Q I D ++ + E+
Sbjct: 70 GRVIGLDLKPMDQPDKPNA--QFIQGDAFELTQEFLDEI 106
>sp|A8ZT18|RLME_DESOH Ribosomal RNA large subunit methyltransferase E
OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rlmE PE=3 SV=1
Length = 207
Score = 79 bits (194), Expect = 2e-014
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Frame = +3
Query: 9 GAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLG 188
G PD + R+A+ Y ARS +KL +IQK++ ++KPG++VLDLGC PG+W+ A +++G
Sbjct: 8 GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67
Query: 189 PLRSGGNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQ 305
GG V G+D+KKV A+ ++ D+ R+
Sbjct: 68 ---RGGKVTGIDLKKVATH--MPAQATSLQEDIYEIDRE 101
>sp|B7GY18|RLME_ACIB3 Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain AB307-0294) GN=rlmE PE=3 SV=1
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|B7I636|RLME_ACIB5 Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain AB0057) GN=rlmE PE=3 SV=1
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|B2HXD3|RLME_ACIBC Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain ACICU) GN=rlmE PE=3 SV=1
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|B0VSM4|RLME_ACIBS Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain SDF) GN=rlmE PE=3 SV=1
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|A3M851|RLME_ACIBT Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rlmE
PE=3 SV=2
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|B0VEE9|RLME_ACIBY Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter baumannii (strain AYE) GN=rlmE PE=3 SV=1
Length = 216
Score = 76 bits (185), Expect = 3e-013
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++YKLIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R++ +V+SDM
Sbjct: 81 GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNI--LNGRQV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|O62251|RRMJ2_CAEEL Putative ribosomal RNA methyltransferase F45G2.9
OS=Caenorhabditis elegans GN=F45G2.9 PE=2 SV=1
Length = 214
Score = 75 bits (184), Expect = 4e-013
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F +A+ Y ARSAFKL++I +++K +KP S+V+D+GCAPG+WLQV Q
Sbjct: 21 DEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKC----PN 76
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVTGI 383
G G+D++ V P+ A + ++S + IRE H VVLSDM + TG
Sbjct: 77 GYASGVDLQNVL--PIRGADILSLSDITDPAVKLKIRE-KLAHRQVDVVLSDMAPNPTGD 133
Query: 384 TSRDAALSAEL 416
+ D EL
Sbjct: 134 NATDHLRLIEL 144
>sp|Q0A769|RLME_ALHEH Ribosomal RNA large subunit methyltransferase E
OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rlmE PE=3 SV=1
Length = 209
Score = 74 bits (181), Expect = 8e-013
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D + ++AQ+ GY +R+AFKLL+IQ++ +LI+PG +V+DLG APG W QVA + +G
Sbjct: 20 DHWVQQAQKAGYRSRAAFKLLEIQEKDRLIRPGMTVVDLGAAPGGWCQVAAELVG---DR 76
Query: 204 GNVVGMDIKKVKVPPLCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCHSVTGI 383
G V +DI ++ P V I D + + +VLSDM +++G+
Sbjct: 77 GAVFALDILPMEALP----GVHVIQGDFTEEAPLQALLQALEGRPVDLVLSDMAPNLSGV 132
Query: 384 TSRDAALSAELGMRALNLA 440
D + L AL+ A
Sbjct: 133 RVVDQPRAMYLAELALDFA 151
>sp|Q6F8N1|RLME_ACIAD Ribosomal RNA large subunit methyltransferase E
OS=Acinetobacter sp. (strain ADP1) GN=rlmE PE=3 SV=1
Length = 216
Score = 73 bits (178), Expect = 2e-012
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 17/124 (13%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D F ++AQ+ GY AR+A+KLL+IQ++Y+LIKPG +V+DLG APG+W Q+A + +G S
Sbjct: 24 DPFVKKAQKEGYRARAAYKLLEIQEKYRLIKPGMTVVDLGAAPGSWSQIAGKLVG---SK 80
Query: 204 GNVVGMDIKKVKVPP-----LCDARVQTISADVLNFPRQNIRELSPQHMGFSVVLSDMCH 368
G V+ DI + P D R + + +LN N R + +V+SDM
Sbjct: 81 GLVIASDILAMDTLPDVTFLQGDFREEEVFEKLLNI--LNGRTV-------DIVISDMAP 131
Query: 369 SVTG 380
+ +G
Sbjct: 132 NTSG 135
>sp|C0QGP2|RLME_DESAH Ribosomal RNA large subunit methyltransferase E
OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=rlmE PE=3 SV=1
Length = 203
Score = 73 bits (177), Expect = 2e-012
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D + ++A+ Y ARS +KL++IQK++++IK G+SVLDLGCAPG+WL A + GP
Sbjct: 16 DHYTQKARDENYPARSVYKLMEIQKRFQVIKKGASVLDLGCAPGSWLIHAAELTGP---S 72
Query: 204 GNVVGMDIKKV--KVPP 248
G VG+D+K V +PP
Sbjct: 73 GRAVGIDLKPVDAALPP 89
>sp|Q8TR92|RLME_METAC Ribosomal RNA large subunit methyltransferase E
OS=Methanosarcina acetivorans GN=rlmE PE=3 SV=1
Length = 272
Score = 73 bits (177), Expect = 2e-012
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D++Y +A+ GY +R++FKL QI +++ +IK G SV+DLG APG WLQVA Q SG
Sbjct: 7 DYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQ-----LSG 61
Query: 204 GNVVGMDIKKV 236
G V+G+D++++
Sbjct: 62 GKVLGVDLQRI 72
>sp|Q8PUP4|RLME_METMA Ribosomal RNA large subunit methyltransferase E
OS=Methanosarcina mazei GN=rlmE PE=3 SV=1
Length = 268
Score = 73 bits (177), Expect = 2e-012
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = +3
Query: 24 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 203
D++Y +A+ GY +R++FKL QI +++ +IK G SV+DLG APG WLQVA Q SG
Sbjct: 7 DYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQ-----LSG 61
Query: 204 GNVVGMDIKKV 236
G V+G+D++++
Sbjct: 62 GKVLGVDLQRI 72
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,796,540,212
Number of Sequences: 518415
Number of Extensions: 51796540212
Number of Successful Extensions: 358348623
Number of sequences better than 0.0: 0
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