BLASTX 7.6.2
Query= UN12534 /QuerySize=967
(966 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family... 103 6e-020
gi|15221941|ref|NP_175890.1| GRF zinc finger / Zinc knuckle prot... 93 5e-017
gi|297811507|ref|XP_002873637.1| zinc knuckle (CCHC-type) family... 84 2e-014
gi|15240751|ref|NP_196896.1| endonuclease VIII-like 3 [Arabidops... 84 4e-014
gi|148908945|gb|ABR17577.1| unknown [Picea sitchensis] 75 1e-011
gi|296082252|emb|CBI21257.3| unnamed protein product [Vitis vini... 60 6e-007
>gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 103 bits (255), Expect = 6e-020
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = +3
Query: 90 MPTGDCFHCHKPGHWANRCPLKSATKITTIYPAASPPVIHCHCDR-ACLVLTSKTLKNPN 266
M TGDCF CH+PGHWAN CPLK+ T TT+ ASPPVIHC C+ AC +LTSKT KNPN
Sbjct: 1 MSTGDCFRCHQPGHWANNCPLKTTTIPTTV-AVASPPVIHCPCNAGACNILTSKTEKNPN 59
Query: 267 RRFYKCSAVK 296
RRFY C + K
Sbjct: 60 RRFYTCPSCK 69
>gi|15221941|ref|NP_175890.1| GRF zinc finger / Zinc knuckle protein
[Arabidopsis thaliana]
Length = 353
Score = 93 bits (230), Expect = 5e-017
Identities = 42/66 (63%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 MPTGDCFHCHKPGHWANRCPLKSATKITTIYPAASPPVIHCHCDRA-CLVLTSKTLKNPN 266
M +GDCFHCH+PGHWA CPLK+ TK T A SPP IHC C+ C +TSKT KNPN
Sbjct: 1 MSSGDCFHCHQPGHWAKNCPLKTTTK-PTAAAAPSPPDIHCPCNAGPCNTVTSKTEKNPN 59
Query: 267 RRFYKC 284
RRFY C
Sbjct: 60 RRFYTC 65
>gi|297811507|ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 397
Score = 84 bits (207), Expect = 2e-014
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Frame = +3
Query: 363 NCEFFKWCDEVS---INSQPVSLNPPCPCGSGPCRRVTVPDGPNANRSSFVCCIKKGFGA 533
NC+FFKWCD+V+ I +P P C CG+GPCRRV G R+ +CCIK+GFGA
Sbjct: 65 NCKFFKWCDKVTDEDIRFRPAFTIPICSCGAGPCRRVKDVSG----RAYLICCIKEGFGA 120
Query: 534 CGFSQWEDDAQIQS 575
CGF +WED I S
Sbjct: 121 CGFFKWEDAEMIPS 134
Score = 67 bits (163), Expect = 3e-009
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Frame = +3
Query: 90 MPTGDCFHCHKPGHWANRCPLKSATKITTIYPAASPPVIHCHCDRA-CLVLTSKTLKNPN 266
M TG+CF C + GHW + CPLKS T PP IHC C C + + T +NP
Sbjct: 1 MQTGNCFRCRQAGHWISDCPLKSKT------DDDPPPAIHCTCGGGFCEIKVANTRENPG 54
Query: 267 RRFYKCSAVKSPSLF 311
R+FYKC ++ F
Sbjct: 55 RKFYKCPTAQNCKFF 69
>gi|15240751|ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]
Length = 415
Score = 84 bits (205), Expect = 4e-014
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Frame = +3
Query: 363 NCEFFKWCDEVS---INSQPVSLNPPCPCGSGPCRRVTVPDGPNANRSSFVCCIKKGFGA 533
NC FFKWCD+V+ I +P P C CG+GPCRRV G R+ +CCIKKGFGA
Sbjct: 69 NCCFFKWCDKVTDEDIKFRPAFTIPICSCGAGPCRRVKDVSG----RAYLICCIKKGFGA 124
Query: 534 CGFSQWEDDAQIQS 575
CGF +WED I S
Sbjct: 125 CGFFKWEDVEMIPS 138
Score = 69 bits (166), Expect = 1e-009
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Frame = +3
Query: 90 MPTGDCFHCHKPGHWANRCPLKSATKITTIYPAASPPVIHCHCDRA-CLVLTSKTLKNPN 266
M TGDCF C + GHW N CPLKS Y PP I C C C + + T +NP
Sbjct: 6 MQTGDCFRCRQAGHWINDCPLKS-------YTDDPPPAIQCPCGGGFCEIKVANTRENPG 58
Query: 267 RRFYKCSAVKSPSLF 311
R+FYKC ++ F
Sbjct: 59 RKFYKCPTAQNCCFF 73
>gi|148908945|gb|ABR17577.1| unknown [Picea sitchensis]
Length = 374
Score = 75 bits (184), Expect = 1e-011
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Frame = +3
Query: 99 GDCFHCHKPGHWANRCPLKS-ATKITTIYPAASPPVIHCHCDRA-CLVLTSKTLKNPNRR 272
G CF C +PGHWA C + A P C C CLVL S T KNP R+
Sbjct: 102 GVCFKCQQPGHWAKDCVASTYAGPNRGDESGPQAPEKQCPCGGGPCLVLMSSTEKNPGRK 161
Query: 273 FYKCSAVKSPSL--FLSLSLTLY*SLPTF*VPNCEFFKWCDEVSINSQPVSLNPPCPCGS 446
FYKC + F S + + + ++S S+P + CPCG+
Sbjct: 162 FYKCPLREDGGRCNFFEWCDAAQGSSGAY---GGQARAFSADISEGSEP---SMQCPCGA 215
Query: 447 GPCRRVTVPDGPNANRSSFVCCIKKGFGACGFSQWEDDAQIQSEQVGLGGPPCTSTLSDF 626
G C +T N+ R F C +K+G G+C F +W D+ S P S F
Sbjct: 216 GLCPVLTAKTERNSGRQFFRCPLKEGEGSCRFFKWCDELNSISN-------PLPSVAHGF 268
Query: 627 SEFKNSLPN 653
S ++ P+
Sbjct: 269 SSNNDNTPS 277
>gi|296082252|emb|CBI21257.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 60 bits (143), Expect = 6e-007
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 432 CPCGSGPCRRVTVPDGPNANRSSFVCCIKKGFGACGFSQWEDDAQIQSE 578
C CG+G CR GPNA R SF+C +KKG GAC F QWE DAQ+ ++
Sbjct: 2 CSCGAGICRISMEKFGPNAGRRSFICPVKKGQGACNFFQWE-DAQVNTK 49
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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