BLASTX 7.6.2
Query= UN12732 /QuerySize=1215
(1214 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular... 264 1e-070
TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular... 249 3e-066
>TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G38630.1); Has 77
Blast hits to 77 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink). | chr3:20061759-20063880 REVERSE
Length = 468
Score = 264 bits (673), Expect = 1e-070
Identities = 127/137 (92%), Positives = 130/137 (94%), Gaps = 1/137 (0%)
Frame = +1
Query: 538 NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN 717
NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN
Sbjct: 333 NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN 392
Query: 718 ISNILTGKCLAKITSSSGPPKEDESGSSSSSLGNNSKLRRNAVAEALEDITALFYDEERN 897
ISNILTGKCLAKIT SSGPPK+DES SSS+ +G NSK RRNAVAEALEDITALFYDEERN
Sbjct: 393 ISNILTGKCLAKITPSSGPPKDDES-SSSNCMGKNSKQRRNAVAEALEDITALFYDEERN 451
Query: 898 EIYTGNRHGYVHVWSN* 948
EIYTGNRHG VHVWSN*
Sbjct: 452 EIYTGNRHGLVHVWSN* 468
Score = 172 bits (434), Expect = 6e-043
Identities = 86/89 (96%), Positives = 87/89 (97%), Gaps = 2/89 (2%)
Frame = +2
Query: 275 MEGRRITASPRPCSGRRVVAAAKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQERF 454
MEGRRITASPRPCSGRR+V AKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQERF
Sbjct: 1 MEGRRITASPRPCSGRRIV--AKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQERF 58
Query: 455 RNMRLVEQYDTHDPKGHCLVALPFLMKRT 541
RNMRLVEQYDTHDPKGHCLVALPFLMKRT
Sbjct: 59 RNMRLVEQYDTHDPKGHCLVALPFLMKRT 87
>TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G54190.1); Has 79 Blast hits to 77 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
53; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
chr2:16154283-16156302 REVERSE
Length = 468
Score = 249 bits (635), Expect = 3e-066
Identities = 120/137 (87%), Positives = 129/137 (94%), Gaps = 3/137 (2%)
Frame = +1
Query: 538 NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN 717
NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN
Sbjct: 335 NVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADTEDQWIEGNAGSIN 394
Query: 718 ISNILTGKCLAKITSSSGPPKEDESGSSSSSLGNNSKLRRNAVAEALEDITALFYDEERN 897
ISNILTGKCLAKI +++GPPKE++ SSS LGN+S+ RR+AVAEALEDITALFYDEERN
Sbjct: 395 ISNILTGKCLAKIKANNGPPKEED--CSSSDLGNSSR-RRSAVAEALEDITALFYDEERN 451
Query: 898 EIYTGNRHGYVHVWSN* 948
EIYTGNRHG +HVWSN*
Sbjct: 452 EIYTGNRHGLLHVWSN* 468
Score = 152 bits (382), Expect = 6e-037
Identities = 77/89 (86%), Positives = 82/89 (92%), Gaps = 1/89 (1%)
Frame = +2
Query: 275 MEGRRITASPRPCSGRRVVAAAKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQERF 454
MEGRRI A+PRPCSG R V AKKRSRPDGFVNSVKKLQRREISSR DRAFSISTAQERF
Sbjct: 2 MEGRRIIANPRPCSGSRRV-IAKKRSRPDGFVNSVKKLQRREISSRMDRAFSISTAQERF 60
Query: 455 RNMRLVEQYDTHDPKGHCLVALPFLMKRT 541
RNMRLVEQYDTHDPKG+CLV+LP L+KR+
Sbjct: 61 RNMRLVEQYDTHDPKGYCLVSLPNLLKRS 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,762,239,282
Number of Sequences: 33410
Number of Extensions: 6762239282
Number of Successful Extensions: 232603636
Number of sequences better than 0.0: 0
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