BLASTX 7.6.2
Query= UN12748 /QuerySize=897
(896 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15240056|ref|NP_196263.1| DnaQ-like exonuclease domain-contai... 324 2e-086
gi|297810747|ref|XP_002873257.1| hypothetical protein ARALYDRAFT... 321 1e-085
gi|48425930|pdb|1VK0|A Chain A, X-Ray Structure Of Gene Product ... 319 4e-085
gi|297833964|ref|XP_002884864.1| hypothetical protein ARALYDRAFT... 278 1e-072
gi|15229855|ref|NP_187783.1| DnaQ-like 3'-5' exonuclease domain-... 272 5e-071
gi|255561991|ref|XP_002522004.1| glycogenin, putative [Ricinus c... 64 2e-008
gi|224144613|ref|XP_002325351.1| predicted protein [Populus tric... 62 1e-007
gi|224144617|ref|XP_002325352.1| predicted protein [Populus tric... 60 3e-007
gi|115438991|ref|NP_001043775.1| Os01g0660800 [Oryza sativa Japo... 57 3e-006
>gi|15240056|ref|NP_196263.1| DnaQ-like exonuclease domain-containing protein
[Arabidopsis thaliana]
Length = 206
Score = 324 bits (828), Expect = 2e-086
Identities = 169/206 (82%), Positives = 181/206 (87%), Gaps = 9/206 (4%)
Frame = +1
Query: 142 MASFDGPKFKMTDGTYVQTKSIDVGSSTDISPHLSLIREDSISNSNRAVIFDVNW----- 306
MASFDGPKFKMTDG+YVQTK+IDVGSSTDISP+LSLIREDSI N NRAVIFDV W
Sbjct: 1 MASFDGPKFKMTDGSYVQTKTIDVGSSTDISPYLSLIREDSILNGNRAVIFDVYWDVGFP 60
Query: 307 --ETSTKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEE 480
ET TK S WSLSSVKLSTR+LCLFL+LP PFH DNL DL RFFASKFVTFVGVQIEE
Sbjct: 61 ETETKTKTSGWSLSSVKLSTRNLCLFLRLPK-PFH-DNLKDLYRFFASKFVTFVGVQIEE 118
Query: 481 DLNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIESKWE 660
DL+LLRENHGLVIRN I VGKLAA ARGTL+LE+LGTRELAHRVLWSDL +LDSIE+KWE
Sbjct: 119 DLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKWE 178
Query: 661 EKGSEERLEAAAIEGWLIFNVWDQLS 738
+ G EE+LEAAAIEGWLI NVWDQLS
Sbjct: 179 KAGPEEQLEAAAIEGWLIVNVWDQLS 204
>gi|297810747|ref|XP_002873257.1| hypothetical protein ARALYDRAFT_487454
[Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 321 bits (821), Expect = 1e-085
Identities = 168/207 (81%), Positives = 181/207 (87%), Gaps = 9/207 (4%)
Frame = +1
Query: 142 MASFDGPKFKMTDGTYVQTKSIDVGSSTDISPHLSLIREDSISNSNRAVIFDVNW----- 306
MASFDGPKFKMTDG+YVQTK+IDVGSSTDISP+LSLIREDSI N NRAVIFDV W
Sbjct: 1 MASFDGPKFKMTDGSYVQTKTIDVGSSTDISPYLSLIREDSILNGNRAVIFDVYWDVGFP 60
Query: 307 --ETSTKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEE 480
ET TK S WSLSSVKLSTR+LCLFL+LP PFH DNL DL RFFASKFVTFVGVQIEE
Sbjct: 61 ETETKTKTSGWSLSSVKLSTRNLCLFLRLPK-PFH-DNLKDLYRFFASKFVTFVGVQIEE 118
Query: 481 DLNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIESKWE 660
DLNLL ENHGLVIRN I +GKLA ARGTL+LE+LGTRELAHRVLWSDL +LDSIE+K E
Sbjct: 119 DLNLLCENHGLVIRNAINIGKLAVKARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKGE 178
Query: 661 EKGSEERLEAAAIEGWLIFNVWDQLSQ 741
+ GSEE+LEAAAIEGWLIFNVWDQLS+
Sbjct: 179 KAGSEEQLEAAAIEGWLIFNVWDQLSE 205
>gi|48425930|pdb|1VK0|A Chain A, X-Ray Structure Of Gene Product From
Arabidopsis Thaliana At5g06450
Length = 206
Score = 319 bits (817), Expect = 4e-085
Identities = 167/205 (81%), Positives = 179/205 (87%), Gaps = 9/205 (4%)
Frame = +1
Query: 145 ASFDGPKFKMTDGTYVQTKSIDVGSSTDISPHLSLIREDSISNSNRAVIFDVNW------ 306
ASFDGPKFK TDG+YVQTK+IDVGSSTDISP+LSLIREDSI N NRAVIFDV W
Sbjct: 2 ASFDGPKFKXTDGSYVQTKTIDVGSSTDISPYLSLIREDSILNGNRAVIFDVYWDVGFPE 61
Query: 307 -ETSTKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEED 483
ET TK S WSLSSVKLSTR+LCLFL+LP PFH DNL DL RFFASKFVTFVGVQIEED
Sbjct: 62 TETKTKTSGWSLSSVKLSTRNLCLFLRLPK-PFH-DNLKDLYRFFASKFVTFVGVQIEED 119
Query: 484 LNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIESKWEE 663
L+LLRENHGLVIRN I VGKLAA ARGTL+LE+LGTRELAHRVLWSDL +LDSIE+KWE+
Sbjct: 120 LDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKWEK 179
Query: 664 KGSEERLEAAAIEGWLIFNVWDQLS 738
G EE+LEAAAIEGWLI NVWDQLS
Sbjct: 180 AGPEEQLEAAAIEGWLIVNVWDQLS 204
>gi|297833964|ref|XP_002884864.1| hypothetical protein ARALYDRAFT_897381
[Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 278 bits (710), Expect = 1e-072
Identities = 137/202 (67%), Positives = 168/202 (83%), Gaps = 4/202 (1%)
Frame = +1
Query: 142 MASFDGPKFKMTDGTYVQTKSIDVGSSTDISPHLSLIREDSISNSNRAVIFDVNW--ETS 315
MASFDG F M D +++QTK+IDVGS+TDISP+LS I EDS+ N NR+++FDV W E+
Sbjct: 1 MASFDGQGFMMVDNSWIQTKAIDVGSTTDISPYLSKILEDSVWNGNRSIVFDVYWDVESV 60
Query: 316 TKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEEDLNLL 495
S+W L SVK ST++ CLFL+LPNP DNL DL RFFASKFVTFVGVQI+EDL LL
Sbjct: 61 NTKSEWRLCSVKFSTKNFCLFLRLPNP--FSDNLKDLYRFFASKFVTFVGVQIQEDLALL 118
Query: 496 RENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIESKWEEKGSE 675
+ENHG+VIR+ +E+GKLAAVARGT ++E+LGTRELAH++LW D+SRLDSI+SKW+E S
Sbjct: 119 KENHGIVIRSSLEIGKLAAVARGTPIVEFLGTRELAHKILWYDMSRLDSIQSKWDEASSN 178
Query: 676 ERLEAAAIEGWLIFNVWDQLSQ 741
+RLEAAAIEGWLIFNV+DQL Q
Sbjct: 179 DRLEAAAIEGWLIFNVYDQLQQ 200
>gi|15229855|ref|NP_187783.1| DnaQ-like 3'-5' exonuclease domain-containing
protein [Arabidopsis thaliana]
Length = 200
Score = 272 bits (695), Expect = 5e-071
Identities = 138/203 (67%), Positives = 168/203 (82%), Gaps = 6/203 (2%)
Frame = +1
Query: 142 MASFDGPKFKMTDGTYVQTKSIDVGSSTDISPHLSLIREDSISNSNRAVIFDVNWE---T 312
MASFDG F M D ++VQTK+IDV S+TDISP+LS I EDS+ N NR+++FDV W+
Sbjct: 1 MASFDGQGFMMVDNSWVQTKAIDVESTTDISPYLSKILEDSVWNGNRSIVFDVYWDVKSV 60
Query: 313 STKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEEDLNL 492
STK S+W L SVK ST++ CLFL+LPNP DNL DL RFFASKFVTFVGVQI+EDL L
Sbjct: 61 STK-SEWRLCSVKFSTKNFCLFLRLPNP--FCDNLKDLYRFFASKFVTFVGVQIQEDLAL 117
Query: 493 LRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIESKWEEKGS 672
L+ENHG+VIR+ +E+GKLAA ARGT ++E+LGTRELAH++LW D+SRLDSI+SKW+E S
Sbjct: 118 LKENHGIVIRSSLEIGKLAAKARGTPIVEFLGTRELAHKILWYDMSRLDSIQSKWDEASS 177
Query: 673 EERLEAAAIEGWLIFNVWDQLSQ 741
+RLEAAAIEGWLIFNV+DQL Q
Sbjct: 178 NDRLEAAAIEGWLIFNVYDQLQQ 200
>gi|255561991|ref|XP_002522004.1| glycogenin, putative [Ricinus communis]
Length = 776
Score = 64 bits (155), Expect = 2e-008
Identities = 43/156 (27%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Frame = +1
Query: 337 LSSVKLSTRSLCLFLKLPNPPFHGDNLDDLRRFFASKFVTFVGVQIEEDLNLLRENHGLV 516
++ + + T+ C+ ++L +P + + L+RFFA K + FVGV I+ED+ LRE++G+V
Sbjct: 88 IALLTICTKLGCVLIRL-SPNYISPS---LKRFFAIKDIVFVGVHIKEDVQKLREDYGVV 143
Query: 517 IRNVIEVGKLAAVARGTLLLEYLGTRELAHRVL--WSDLSRLDSIESKW-EEKGSEERLE 687
IRN +E+ AA + + RELA+++L + + S W + S E++E
Sbjct: 144 IRNAVELSDWAAKVQDNPRFIFYSARELANKILSVKFEPKPYTVLWSNWFDHNLSPEQIE 203
Query: 688 AAAIEGWLIFNVWDQLSQ*DSTTLICVFVIFVILCM 795
AA + + + + +L + + F++ + C+
Sbjct: 204 CAASDAYAAYRIGKKLLDSGNKRVSVCFLVKIYGCL 239
>gi|224144613|ref|XP_002325351.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 62 bits (148), Expect = 1e-007
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Frame = +1
Query: 424 LRRFFASKFVTFVGVQIEEDLNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELA 603
L+RF + K + FVGV I+EDL LR GLV+RN +E+ +LAA RELA
Sbjct: 100 LKRFLSIKDIMFVGVHIKEDLQRLRCVDGLVVRNAVELSELAAKIYDQPRFAAYSARELA 159
Query: 604 HRV--LWSDLSRLDSIESKW-EEKGSEERLEAAAIEGWLIFNVWDQLSQ*DSTTLICVF 771
+R+ L +D L+ + S W + E++E+A I+ + + + +L + S+++ +F
Sbjct: 160 YRIASLKADSKPLNVLWSNWFDHTLCPEQIESATIDAYATYKIGKKLMESGSSSVKRLF 218
>gi|224144617|ref|XP_002325352.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 60 bits (145), Expect = 3e-007
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Frame = +1
Query: 424 LRRFFASKFVTFVGVQIEEDLNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELA 603
L+RF + K + FVGV I+EDL LR GLV+RN +E+ +LAA RELA
Sbjct: 115 LKRFLSIKDIMFVGVHIKEDLQRLRCVDGLVVRNAVELSELAAKIYDQPRFAAYSARELA 174
Query: 604 HRV--LWSDLSRLDSIESKW-EEKGSEERLEAAAIEGWLIFNVWDQLSQ 741
+R+ L +D L+ + S W + E++E+A I+ + + + +L +
Sbjct: 175 YRIASLKADSKPLNVLWSNWFDHTLCPEQIESATIDAYATYKIGKKLME 223
>gi|115438991|ref|NP_001043775.1| Os01g0660800 [Oryza sativa Japonica Group]
Length = 199
Score = 57 bits (137), Expect = 3e-006
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Frame = +1
Query: 295 DVNWETSTKASKWSLSSVKLSTRSLCLFLKLPNPPFHGDNL-DDLRRFFASKFVTFVGVQ 471
DV W S ++ ++ ++L CL +L + D + LRRF A FVGV
Sbjct: 51 DVEWRPSYGPAQNPVALLQLCVDRRCLIFQL----LYADYVPGSLRRFLAGAADCFVGVG 106
Query: 472 IEEDLNLLRENHGLVIRNVIEVGKLAAVARGTLLLEYLGTRELAHRVLWSDLSRLDSIE- 648
+++D L ++HGL + N ++ LAA G L G + + V+ +DL + +
Sbjct: 107 VDKDAERLSDDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQRVTM 166
Query: 649 SKWEEKG-SEERLEAAAIEGWLIFNVWDQL 735
S+W+ S E++ A I+ ++ F V +L
Sbjct: 167 SRWDASCLSNEQIRYACIDAYVSFEVGRRL 196
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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