BLASTX 7.6.2
Query= UN12881 /QuerySize=1384
(1383 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18402803|ref|NP_566672.1| RNA recognition motif-containing pr... 603 3e-170
gi|297830792|ref|XP_002883278.1| RNA recognition motif-containin... 592 6e-167
gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis ... 562 6e-158
gi|224110196|ref|XP_002315444.1| predicted protein [Populus tric... 414 2e-113
gi|259490527|ref|NP_001159310.1| hypothetical protein LOC1003044... 347 4e-093
gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japo... 342 8e-092
gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryz... 310 3e-082
gi|225464121|ref|XP_002264164.1| PREDICTED: hypothetical protein... 306 8e-081
gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vini... 306 8e-081
gi|224097630|ref|XP_002311019.1| predicted protein [Populus tric... 290 5e-076
gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 ... 161 3e-037
gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [... 155 2e-035
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 374
Score = 603 bits (1554), Expect = 3e-170
Identities = 312/377 (82%), Positives = 331/377 (87%), Gaps = 13/377 (3%)
Frame = +3
Query: 63 EALIASASASASFFLPICNSSS----YNRLFPCSSYSPNINFGTFRKNHLSFSSHLVYSS 230
EALI AS SFF+PI NSSS NR FP S YSPN+NFGTFRK LS SSHLV+SS
Sbjct: 2 EALI----ASTSFFVPISNSSSSHIINNRFFP-SFYSPNLNFGTFRKTSLS-SSHLVFSS 55
Query: 231 SAVSAPSSSTTLSLNTYWMVILDKPPQRVSSKSDIVDYYVQILAKVLGNEKDAQMSIYDA 410
SA+SAP SST L+ N+YWMV+LDKPP VSSKS +VDYYV+ILAKVLGNEKDAQ+SIYDA
Sbjct: 56 SAISAPPSSTVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDA 115
Query: 411 SFDTHFGFCCHIDEDASRHLARLREVLSVRPEADYSSGNKNYGIGNQTGVSLFDHGRVKH 590
SFDTHFGFCCHIDEDASR LA L V+S+RPE DYSS KNYGIG+ GVSLFDHG VKH
Sbjct: 116 SFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKH 175
Query: 591 WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSKYGFCCDLDEKCA 770
WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQS +GFCCDLDE+ A
Sbjct: 176 WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSA 235
Query: 771 EELAGVPGVLAVVPDNNFESLNKDYEGDNSRQDSR--ESSESPPVKTKKLFITGLSFYTS 944
ELAGVPGVLAVVPDN+FESLNKDYEGD S QDSR + SESPPVKTKKLFITGLSFYTS
Sbjct: 236 VELAGVPGVLAVVPDNSFESLNKDYEGD-STQDSRDQDDSESPPVKTKKLFITGLSFYTS 294
Query: 945 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEMNGKIINGWMIV 1124
EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA ALKEMNGKIINGWMIV
Sbjct: 295 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIV 354
Query: 1125 VDVAKTKPFRHNRRETS 1175
VDVAKTKPFR NR + S
Sbjct: 355 VDVAKTKPFRQNRSQPS 371
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 376
Score = 592 bits (1525), Expect = 6e-167
Identities = 308/379 (81%), Positives = 331/379 (87%), Gaps = 11/379 (2%)
Frame = +3
Query: 60 MEALIASASASASFFLPICNSSSY---NRLFPCSSYSPNINFGTFRKNHLSF-SSHLVYS 227
MEALI A SFFLPI NSSS+ NR FP S SPN+N GTFRK + S SSH+VYS
Sbjct: 1 MEALI----APTSFFLPISNSSSHIINNRFFPSFS-SPNLNLGTFRKTYTSLSSSHIVYS 55
Query: 228 SSAVSAPSSST-TLSLNTYWMVILDKPPQRVSSKSDIVDYYVQILAKVLGNEKDAQMSIY 404
SSA+SAP SST + + N+YWMV+LDKPPQ VSSKSDIVDYYV+ILAKVLGNEKDAQ+SIY
Sbjct: 56 SSAISAPPSSTASPTRNSYWMVLLDKPPQWVSSKSDIVDYYVEILAKVLGNEKDAQVSIY 115
Query: 405 DASFDTHFGFCCHIDEDASRHLARLREVLSVRPEADYSSGNKNYGIGNQTGVSLFDHGRV 584
DASFDTHFGFCC+IDEDASR LA L V+SVRPEA YSS KNYG GNQT VSLFDHG V
Sbjct: 116 DASFDTHFGFCCYIDEDASRQLACLPGVVSVRPEAGYSSEKKNYGFGNQTCVSLFDHGTV 175
Query: 585 KHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSKYGFCCDLDEK 764
KHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVL NEKDAQMCLYHVSWQS +GFCCDLDE
Sbjct: 176 KHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLCNEKDAQMCLYHVSWQSDFGFCCDLDEN 235
Query: 765 CAEELAGVPGVLAVVPDNNFESLNKDYEGDNSRQD-SRESSESPPVKTKKLFITGLSFYT 941
A ELAGVPGVLAVVPDN+FESLNKDYEGD+++ ++ SESPP+KTKKLFITGLSFYT
Sbjct: 236 SAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQASRDQDDSESPPIKTKKLFITGLSFYT 295
Query: 942 SEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEMNGKIINGWMI 1121
SEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAAS ALKEMNGKIINGWMI
Sbjct: 296 SEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKEMNGKIINGWMI 355
Query: 1122 VVDVAKTKPFRHNRRETSS 1178
VVDVAKTKPFR NR + SS
Sbjct: 356 VVDVAKTKPFRQNRSQPSS 374
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 562 bits (1447), Expect = 6e-158
Identities = 291/353 (82%), Positives = 310/353 (87%), Gaps = 13/353 (3%)
Frame = +3
Query: 63 EALIASASASASFFLPICNSSS----YNRLFPCSSYSPNINFGTFRKNHLSFSSHLVYSS 230
EALI AS SFF+PI NSSS NR FP S YSPN+NFGTFRK LS SSHLV+SS
Sbjct: 2 EALI----ASTSFFVPISNSSSSHIINNRFFP-SFYSPNLNFGTFRKTSLS-SSHLVFSS 55
Query: 231 SAVSAPSSSTTLSLNTYWMVILDKPPQRVSSKSDIVDYYVQILAKVLGNEKDAQMSIYDA 410
SA+SAP SST L+ N+YWMV+LDKPP VSSKS +VDYYV+ILAKVLGNEKDAQ+SIYDA
Sbjct: 56 SAISAPPSSTVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDA 115
Query: 411 SFDTHFGFCCHIDEDASRHLARLREVLSVRPEADYSSGNKNYGIGNQTGVSLFDHGRVKH 590
SFDTHFGFCCHIDEDASR LA L V+S+RPE DYSS KNYGIG+ GVSLFDHG VKH
Sbjct: 116 SFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKH 175
Query: 591 WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSKYGFCCDLDEKCA 770
WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQS +GFCCDLDE+ A
Sbjct: 176 WMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSA 235
Query: 771 EELAGVPGVLAVVPDNNFESLNKDYEGDNSRQDSR--ESSESPPVKTKKLFITGLSFYTS 944
ELAGVPGVLAVVPDN+FESLNKDYEGD S QDSR + SESPPVKTKKLFITGLSFYTS
Sbjct: 236 VELAGVPGVLAVVPDNSFESLNKDYEGD-STQDSRDQDDSESPPVKTKKLFITGLSFYTS 294
Query: 945 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEMNGKI 1103
EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA ALKEMNGK+
Sbjct: 295 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKV 347
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 414 bits (1063), Expect = 2e-113
Identities = 207/304 (68%), Positives = 245/304 (80%), Gaps = 14/304 (4%)
Frame = +3
Query: 294 LDKPPQRVSSKSDIVDYYVQILAKVLGNEKDAQMSIYDASFDTHFGFCCHIDEDASRHLA 473
++ PP+ V+SK +I+DYYV+ L + LG+E DAQM IYDA +DTHFGFCC IDEDAS LA
Sbjct: 1 METPPKGVNSKPEIIDYYVKTLERALGSEIDAQMCIYDACYDTHFGFCCDIDEDASLELA 60
Query: 474 RLREVLSVRPEADYSSGNKNYGIGNQTGV---------SLFDHGRVKHWMVRIDKPGVGI 626
RL VLSVRP+ DY+S K+Y G + LF G KHW+VRIDKPGVG+
Sbjct: 61 RLPGVLSVRPDPDYNSVEKDYSSGVKLSTLSNPQIGSKLLFPSGNTKHWLVRIDKPGVGV 120
Query: 627 VTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAV 806
VTKAQMVD+ Q+L+KV+ EKDAQMC+YHVSWQS +GFCC+LDE+CA+ELAGVPGVL+V
Sbjct: 121 VTKAQMVDYYAQILTKVMGYEKDAQMCIYHVSWQSNFGFCCELDEECAQELAGVPGVLSV 180
Query: 807 VPDNNFESLNKDYEGDN-----SRQDSRESSESPPVKTKKLFITGLSFYTSEKTLRAAFE 971
+PD +FES NKDY GD+ + DS E+S+ V+TKKLFITGLSFYTSEKTLRAAFE
Sbjct: 181 LPDKDFESENKDYRGDSLINSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAAFE 240
Query: 972 GFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEMNGKIINGWMIVVDVAKTKPF 1151
GFGELVEVKIIMDKISKRSKGYAF++YTTEEAAS ALKEMNGKIINGWMIVVDVAK+ P
Sbjct: 241 GFGELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPP 300
Query: 1152 RHNR 1163
R++R
Sbjct: 301 RYSR 304
>gi|259490527|ref|NP_001159310.1| hypothetical protein LOC100304402 [Zea mays]
Length = 398
Score = 347 bits (888), Expect = 4e-093
Identities = 180/319 (56%), Positives = 232/319 (72%), Gaps = 13/319 (4%)
Frame = +3
Query: 225 SSSAVSAPSSSTTLSLNTYWMVILDKPPQRVS----SKSDIVDYYVQILAKVLGNEKDAQ 392
S A A +S+ + S ++ W+V++D PP S+++ VDYY LA+V+G+EK+AQ
Sbjct: 61 SPPAQLAAASTESQSRSSRWVVVMDTPPAAAGGSGVSRAEAVDYYAATLAQVVGSEKEAQ 120
Query: 393 MSIYDASFDTHFGFCCHIDEDASRHLARLREVLSVRPEADYSSGNKNYGIGNQT------ 554
M I +AS+D + F C IDEDAS+ LA++ VLSV+ + S N+ + T
Sbjct: 121 MRICEASWDGTYEFRCEIDEDASKELAKMPGVLSVQLDMGNKSEKDNHSLSLSTANLVSI 180
Query: 555 --GVSLFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQ 728
G S G+ + W+VR++KPGV +VTKAQMVDH Q+L KVL NE+DAQ+ +YHVSW
Sbjct: 181 SDGASTSSSGKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVLGNEQDAQVSIYHVSWD 240
Query: 729 SKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEGDNSRQDSRESSESPPVKTK 908
YGFCC +DE+CA+ELA VPGVL+V PD NF S NK+Y+GD+ + S E + + +KTK
Sbjct: 241 RDYGFCCHIDEECAKELADVPGVLSVQPDTNFGSDNKNYKGDDGVKSS-EGTGAVDIKTK 299
Query: 909 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1088
+LF+TGLSFYTSEKTLRAAFE FGELVEVKIIMD+ISKRSKGYAF+EYTTEEA ALK
Sbjct: 300 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 359
Query: 1089 MNGKIINGWMIVVDVAKTK 1145
MNG+IINGWMIVVDVAKT+
Sbjct: 360 MNGQIINGWMIVVDVAKTR 378
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
Length = 399
Score = 342 bits (877), Expect = 8e-092
Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 26/346 (7%)
Frame = +3
Query: 162 PNINFGTFRKNHLSFSSHLVYSSSAVSAPSSSTTLSLNTY---WMVILDKPPQRVS---- 320
P+++ T R+ F L +S+A S+P S + W+V++++PP
Sbjct: 33 PHLSPHTRRRRQRRF---LRLASAAASSPPPLPAASAQPHCSRWVVVMERPPAPAGGGEV 89
Query: 321 SKSDIVDYYVQILAKVLGNEKDAQMSIYDASFDTHFGFCCHIDEDASRHLARLREVLSVR 500
S+++ VD+YV LA+VLG++++AQM IYDAS+D + F C ID++ASR LA++ VL+V+
Sbjct: 90 SRAEAVDHYVATLARVLGSQEEAQMRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVK 149
Query: 501 PEAD---------YSSGNKNYGIGNQTGVSLFDH----GRVKHWMVRIDKPGVGIVTKAQ 641
P+ D + SG +GN + ++ +H G + W+VR++KPGV +VTKAQ
Sbjct: 150 PDTDKVDMSEKDNHGSGLSAANLGNFSD-AVSNHSSSSGENEFWLVRMEKPGVEVVTKAQ 208
Query: 642 MVDHCVQLLSKVLWNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNN 821
MVDH Q L KVL NEKDAQ+ +YH+SW+ YGFCC +DE+CA+ELA V GVL+V PD N
Sbjct: 209 MVDHYTQTLMKVLGNEKDAQVSIYHISWERDYGFCCHIDEECAKELADVSGVLSVQPDTN 268
Query: 822 FESLNKDYEGDNSRQDSRESSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI 1001
F S NK+Y+GD+S + S + VKTK+LF+TGLSFYTSEKTLRAAFE FGELVEVKI
Sbjct: 269 FGSDNKNYKGDDSFKSSEATQAE--VKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKI 326
Query: 1002 IMDKISKRSKGYAFIEYTTEEAASVALKEMNGKIINGWMIVVDVAK 1139
IMDKISKRSKGYAFIEYTTEEA ALK MNG+IINGWMIVVDVAK
Sbjct: 327 IMDKISKRSKGYAFIEYTTEEAGGAALKAMNGQIINGWMIVVDVAK 372
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa
Japonica Group]
Length = 369
Score = 310 bits (794), Expect = 3e-082
Identities = 162/268 (60%), Positives = 202/268 (75%), Gaps = 16/268 (5%)
Frame = +3
Query: 375 NEKDAQMSIYDASFDTHFGFCCHIDEDASRHLARLREVLSVRPEAD---------YSSGN 527
++++AQM IYDAS+D + F C ID++ASR LA++ VL+V+P+ D + SG
Sbjct: 78 SQEEAQMRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGL 137
Query: 528 KNYGIGNQTGVSLFDH----GRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKD 695
+GN + ++ +H G + W+VR++KPGV +VTKAQMVDH Q L KVL NEKD
Sbjct: 138 SAANLGNFSD-AVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEKD 196
Query: 696 AQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEGDNSRQDSR 875
AQ+ +YH+SW+ YGFCC +DE+CA+ELA V GVL+V PD NF S NK+Y+GD+S + S
Sbjct: 197 AQVSIYHISWERDYGFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNYKGDDSFKSSE 256
Query: 876 ESSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYT 1055
+ VKTK+LF+TGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSKGYAFIEYT
Sbjct: 257 ATQAE--VKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYT 314
Query: 1056 TEEAASVALKEMNGKIINGWMIVVDVAK 1139
TEEA ALK MNG+IINGWMIVVDVAK
Sbjct: 315 TEEAGGAALKAMNGQIINGWMIVVDVAK 342
>gi|225464121|ref|XP_002264164.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 409
Score = 306 bits (782), Expect = 8e-081
Identities = 153/226 (67%), Positives = 181/226 (80%), Gaps = 8/226 (3%)
Frame = +3
Query: 510 DYSSGNKNYGIGNQTGV---SLFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVL 680
DY+ N G + + + LF G K+W+V++D+P VG+VTKAQMVD Q+L+KVL
Sbjct: 177 DYTFSNIQLGSVSNSDIGSPQLFPAGNSKYWLVQMDRPTVGVVTKAQMVDFYAQILTKVL 236
Query: 681 WNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEGDNS 860
NEKDAQMC+YH+SWQS +GFCC+LDE+CA ELAGVPGVL+V PD NFES NKDY G +
Sbjct: 237 GNEKDAQMCIYHISWQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGGGSL 296
Query: 861 RQ-----DSRESSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKR 1025
+ DS E+++ +KTKKLF+TGLSFYTSEKTLR AFEGFGELVEVKIIMDKISKR
Sbjct: 297 QNSTDSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKR 356
Query: 1026 SKGYAFIEYTTEEAASVALKEMNGKIINGWMIVVDVAKTKPFRHNR 1163
SKGYAFIEYTTEEAAS ALKEMNGKIINGWMIVVDVAK P +++R
Sbjct: 357 SKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSR 402
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 306 bits (782), Expect = 8e-081
Identities = 153/226 (67%), Positives = 181/226 (80%), Gaps = 8/226 (3%)
Frame = +3
Query: 510 DYSSGNKNYGIGNQTGV---SLFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVL 680
DY+ N G + + + LF G K+W+V++D+P VG+VTKAQMVD Q+L+KVL
Sbjct: 83 DYTFSNIQLGSVSNSDIGSPQLFPAGNSKYWLVQMDRPTVGVVTKAQMVDFYAQILTKVL 142
Query: 681 WNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEGDNS 860
NEKDAQMC+YH+SWQS +GFCC+LDE+CA ELAGVPGVL+V PD NFES NKDY G +
Sbjct: 143 GNEKDAQMCIYHISWQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGGGSL 202
Query: 861 RQ-----DSRESSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKR 1025
+ DS E+++ +KTKKLF+TGLSFYTSEKTLR AFEGFGELVEVKIIMDKISKR
Sbjct: 203 QNSTDSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKR 262
Query: 1026 SKGYAFIEYTTEEAASVALKEMNGKIINGWMIVVDVAKTKPFRHNR 1163
SKGYAFIEYTTEEAAS ALKEMNGKIINGWMIVVDVAK P +++R
Sbjct: 263 SKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSR 308
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 290 bits (741), Expect = 5e-076
Identities = 149/205 (72%), Positives = 172/205 (83%), Gaps = 5/205 (2%)
Frame = +3
Query: 504 EADYSSGNKNYGIGN-QTGVS-LFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKV 677
E DYS G + + N Q G + LF G KHW+V+IDKP VG+VTKAQMVD+ Q+L+KV
Sbjct: 127 EKDYSLGFRLSTLSNPQIGSNLLFPAGNTKHWLVKIDKPAVGVVTKAQMVDYHAQILTKV 186
Query: 678 LWNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEGDN 857
+ NEKDAQMC+YHVSWQS +GFCC+LDE+CA+ELAGVPGVL+V PD N ES NKDY GD+
Sbjct: 187 MGNEKDAQMCIYHVSWQSNFGFCCELDEECAQELAGVPGVLSVQPDKNDESENKDYGGDH 246
Query: 858 --SRQDSRESSESPPVKTKKLFIT-GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 1028
+ DS E+S++ PVKTKKLFIT GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS
Sbjct: 247 IINSADSSEASQTTPVKTKKLFITAGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 306
Query: 1029 KGYAFIEYTTEEAASVALKEMNGKI 1103
KGYAF+EYTTEEAAS ALKEMNGK+
Sbjct: 307 KGYAFVEYTTEEAASAALKEMNGKV 331
Score = 133 bits (334), Expect = 7e-029
Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
Frame = +3
Query: 156 YSPNINFGTFRKNHLSFSSHLVYSSSAVSAPSSSTTLS--LNTYWMVILDKPPQRVSSKS 329
YSP N + + LS SS + S+ + S+ T S N +WM++++ PP+ V+SK
Sbjct: 2 YSPIKNKNHIKTHSLSSSSSFISLSTKATTTSTCTPTSTKTNKHWMILMESPPKGVNSKP 61
Query: 330 DIVDYYVQILAKVLGNEKDAQMSIYDASFDTHFGFCCHIDEDASRHLARLREVLSVRPEA 509
+I+DYYV+ L +V+G+EKDAQM +YD+S DT FGFCC IDEDAS LARL V+SVRP+
Sbjct: 62 EIIDYYVKTLERVIGSEKDAQMCMYDSSCDTRFGFCCDIDEDASLELARLPGVISVRPDP 121
Query: 510 DYSSGNKNYGIG 545
DY+S K+Y +G
Sbjct: 122 DYNSAEKDYSLG 133
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis
vinifera]
Length = 408
Score = 161 bits (407), Expect = 3e-037
Identities = 80/99 (80%), Positives = 89/99 (89%)
Frame = +3
Query: 867 DSRESSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 1046
DS E+++ +K KKLF+TGLSFYTSEKTLR AFEGFGELVEVKIIMDKISKRSKGYAFI
Sbjct: 303 DSMEANQPTNIKXKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFI 362
Query: 1047 EYTTEEAASVALKEMNGKIINGWMIVVDVAKTKPFRHNR 1163
EY+TEEAAS ALKEMNGKIINGWMIVVDVAK P +++R
Sbjct: 363 EYSTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSR 401
Score = 155 bits (391), Expect = 2e-035
Identities = 79/147 (53%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 510 DYSSGNKNYGIGNQTGV---SLFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVL 680
DY+ N G + + + LF G KHW+V++D+P VG+VTKAQMVD Q+L+KVL
Sbjct: 132 DYTFSNIQLGSVSNSDIGSPQLFPAGNSKHWLVQMDRPTVGVVTKAQMVDFYAQILTKVL 191
Query: 681 WNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEG-DN 857
NEKDAQMC+YH+SWQS +GFCC+LDE+CA ELAGVPGVL+V PD NFES NKDY D
Sbjct: 192 GNEKDAQMCIYHISWQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGVLDI 251
Query: 858 SRQDSRESSESPPVKTKKLFITGLSFY 938
D ++S + P+ L I FY
Sbjct: 252 KWDDEQDSIKIRPLVATVLDIADHLFY 278
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus
communis]
Length = 371
Score = 155 bits (390), Expect = 2e-035
Identities = 73/119 (61%), Positives = 92/119 (77%), Gaps = 8/119 (6%)
Frame = +3
Query: 510 DYSSGNKNYGIGNQTGVS-----LFDHGRVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSK 674
DYS N G GN + + LF G +HW+VR++KPGVG+VTKAQMVD+ ++L+K
Sbjct: 170 DYS---PNVGFGNLSNLQIGSTPLFLSGNTRHWLVRMNKPGVGVVTKAQMVDYYAEILAK 226
Query: 675 VLWNEKDAQMCLYHVSWQSKYGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDYEG 851
VL N+KDAQMC+YHVSW+ +GFCC+LDE+CA+ELAGVPGVL+V D NFES NKDYEG
Sbjct: 227 VLGNQKDAQMCIYHVSWRPNFGFCCELDEECAQELAGVPGVLSVQLDKNFESENKDYEG 285
Score = 148 bits (371), Expect = 4e-033
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +3
Query: 924 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEMNGKI 1103
GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA+ ALKEMNGKI
Sbjct: 285 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGKI 344
Query: 1104 INGWMIVVDVAKTKPFRHNR 1163
INGWMIVVDVAKT P R++R
Sbjct: 345 INGWMIVVDVAKTSPPRYSR 364
Score = 127 bits (318), Expect = 5e-027
Identities = 65/128 (50%), Positives = 91/128 (71%), Gaps = 5/128 (3%)
Frame = +3
Query: 198 LSFSSHLVYSSSAVS-APSSSTTLSLNTYWMVILDKPPQRVSSKSDIVDYYVQILAKVLG 374
+S ++ + +S+A S SSS+T + N +WMV+++ P Q V+SK +I+DYYV+ LA+VLG
Sbjct: 58 ISLTTRIKSTSTATSFISSSSSTKTDNRHWMVLMESPSQGVNSKPEIIDYYVKTLARVLG 117
Query: 375 NEKDAQMSIYDASFDTHFGFCCHIDEDASRHLARLREVLSVRPEADYSSGNKNY----GI 542
+EKDA++ IYDAS DTHFGFCC IDE S LA L VLSVRP+ DY+S K+Y G
Sbjct: 118 SEKDAELCIYDASCDTHFGFCCDIDETTSLELASLPGVLSVRPDPDYNSEKKDYSPNVGF 177
Query: 543 GNQTGVSL 566
GN + + +
Sbjct: 178 GNLSNLQI 185
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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