BLASTX 7.6.2
Query= UN12898 /QuerySize=1349
(1348 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [A... 574 2e-161
gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid bindin... 564 1e-158
gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana] 562 5e-158
gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis... 411 1e-112
gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid bindin... 406 6e-111
gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid bindin... 405 1e-110
gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [A... 404 3e-110
gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein... 298 2e-078
gi|224086775|ref|XP_002307959.1| predicted protein [Populus tric... 237 5e-060
gi|224137642|ref|XP_002322608.1| predicted protein [Populus tric... 228 2e-057
gi|255561144|ref|XP_002521584.1| r3h domain containing protein, ... 223 9e-056
gi|255552461|ref|XP_002517274.1| r3h domain containing protein, ... 221 3e-055
gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana] 210 5e-052
gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid bindin... 209 1e-051
gi|255636099|gb|ACU18394.1| unknown [Glycine max] 204 3e-050
gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding... 195 2e-047
gi|149941242|emb|CAO02553.1| putative single-stranded nucleic ac... 142 2e-031
gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis ... 126 9e-027
gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis ... 126 1e-026
gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis ... 124 4e-026
>gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 333
Score = 574 bits (1478), Expect = 2e-161
Identities = 288/338 (85%), Positives = 307/338 (90%), Gaps = 8/338 (2%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+TEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEF PFPTSYLRLAA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFRPFPTSYLRLAA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFK 539
HRVAQHYGLVTMALDNG GA DGS+NRIL TKTAESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSENRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 540 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 719
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR P
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPP 181
Query: 720 PLTPPPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 896
PL EVKN +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 182 PL----EVKNTCINRNETEVAVNNDPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 897 YDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1076
YDRYVVDPAYRYVRVMPSGQ F+P+P+HIPFHDG FPQMPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPIPIHIPFHDGVFPQMPRGHQANLNYG-HPLNPALSP 294
Query: 1077 FINHPAAYTPWPNSPAMNYAHSLNGPDTNLFRHPFASN 1190
F ++ A+YTPWPNSPAMNYA LNG DTNLFRHP ASN
Sbjct: 295 FTHNAASYTPWPNSPAMNYAQPLNGSDTNLFRHPSASN 332
>gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 333
Score = 564 bits (1453), Expect = 1e-158
Identities = 283/338 (83%), Positives = 304/338 (89%), Gaps = 8/338 (2%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
A++TEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFK 539
HRVAQHYGLVTMALDNG GA DGSDNRIL TKTAESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 540 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 719
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR P
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPP 181
Query: 720 PLTPPPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 896
L EV+N +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 182 SL----EVRNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 897 YDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1076
YDRYVVDPAYRYVRVMPSGQ F+PMP+HIPFHDG FP MPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYG-HPLNPALSP 294
Query: 1077 FINHPAAYTPWPNSPAMNYAHSLNGPDTNLFRHPFASN 1190
F ++ A+YTPWPNSP MNYA LNG DTNL+R+P ASN
Sbjct: 295 FTHNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASN 332
>gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 562 bits (1448), Expect = 5e-158
Identities = 282/338 (83%), Positives = 303/338 (89%), Gaps = 8/338 (2%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
A++TEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFK 539
HRVAQHYGLVTMALDNG G DGSDNRIL TKTAESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGTGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 540 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 719
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR P
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPP 181
Query: 720 PLTPPPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 896
L EVKN +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREK+RYDPDYDRS
Sbjct: 182 SL----EVKNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKERYDPDYDRS 235
Query: 897 YDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1076
YDRYVVDPAYRYVRVMPSGQ F+PMP+HIPFHDG FP MPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYG-HPLNPALSP 294
Query: 1077 FINHPAAYTPWPNSPAMNYAHSLNGPDTNLFRHPFASN 1190
F ++ A+YTPWPNSP MNYA LNG DTNL+R+P ASN
Sbjct: 295 FTHNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASN 332
>gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis thaliana]
Length = 343
Score = 411 bits (1056), Expect = 1e-112
Identities = 229/339 (67%), Positives = 257/339 (75%), Gaps = 28/339 (8%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+PEQ Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPE-SGRPEGF 536
HRVAQHYGL T AL+ GG VDGS NRILATKT ESR+P VCLSEIPVKQPE GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 537 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 716
KIAIK RP RG+G GSGSGV++NL RSVEERKEEYDKARARIFNSP SSDSEDSS+
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAP 179
Query: 717 PPLTPPPEVKN--ASVNRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKDRY 875
PP P + K+ A +R+E EV V+ NS ++ G R+SGRTS +AIIRDREKDRY
Sbjct: 180 PPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKDRY 239
Query: 876 DPDYDRSYDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHP 1055
DPDYDR+ RYVRV P Q FNP+P+ +PFHD FPQMPR QA LNYG HP
Sbjct: 240 DPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYG-HP 287
Query: 1056 LNPAMSPFINHPAAYTPWPNSPAMNYAHSLNGPDTNLFR 1172
LNPAM+ +YT WP S M YA +LN D + FR
Sbjct: 288 LNPAMT-----APSYTEWP-SATMTYAQTLNASDVHHFR 320
>gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 324
Score = 406 bits (1042), Expect = 6e-111
Identities = 226/331 (68%), Positives = 253/331 (76%), Gaps = 28/331 (8%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+PEQ Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPE-SGRPEGF 536
HRVAQHYGL T AL+ GG VDGS NRILATKT ESR+P VCLSEIPVKQPE GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 537 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 716
KIAIK RP RG+G GSGSGV++NL RSVEERKEEYDKARARIFNSP SSDSEDSS+
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAP 179
Query: 717 PPLTPPPEVKN--ASVNRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKDRY 875
PP P + K+ A +R+E EV V+ NS ++ G R+SGRTS +AIIRDREKDRY
Sbjct: 180 PPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKDRY 239
Query: 876 DPDYDRSYDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHP 1055
DPDYDR+ RYVRV P Q FNP+P+ +PFHD FPQMPR QA LNYG HP
Sbjct: 240 DPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYG-HP 287
Query: 1056 LNPAMSPFINHPAAYTPWPNSPAMNYAHSLN 1148
LNPAM+ +YT WP S M YA +LN
Sbjct: 288 LNPAMT-----APSYTEWP-SATMTYAQTLN 312
>gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 325
Score = 405 bits (1040), Expect = 1e-110
Identities = 214/258 (82%), Positives = 228/258 (88%), Gaps = 8/258 (3%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
A++TEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFK 539
HRVAQHYGLVTMALDNG GA DGSDNRIL TKTAESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 540 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 719
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR P
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPP 181
Query: 720 PLTPPPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 896
L EV+N +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 182 SL----EVRNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 897 YDRYV-VDPAYRYVRVMP 947
YDRYV V P+ + MP
Sbjct: 236 YDRYVRVMPSGQSFSPMP 253
>gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 324
Score = 404 bits (1036), Expect = 3e-110
Identities = 225/333 (67%), Positives = 256/333 (76%), Gaps = 32/333 (9%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+PEQ Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 360 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPE-SGRPEGF 536
HRVAQHYGL T ALD GG VDGS NRILATKTAESR+P VCLSEIPVKQPE G+PEGF
Sbjct: 62 HRVAQHYGLFTTALD--GGGVDGSGNRILATKTAESRYPYVCLSEIPVKQPEIHGKPEGF 119
Query: 537 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 716
KIAIK RP RGSG GSGSGV++NL RSVEERKEEYD+ARARIFNSP SSDSEDSS+ RA
Sbjct: 120 KIAIKPRPNRGSGGSGSGSGVEKNLLRSVEERKEEYDRARARIFNSPSSSDSEDSST-RA 178
Query: 717 PPLTPPPEV----KNASVNRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKD 869
PP PPP + + +R+E+EV +++NS ++ G R+SGRTS +AIIRDREKD
Sbjct: 179 PP-PPPPRLDSKHNSTCPSRNESEVVINHNSNPVDVERNGVFRDSGRTSRVAIIRDREKD 237
Query: 870 RYDPDYDRSYDRYVVDPAYRYVRVMPSGQGFNPMPLHIPFHDGGFPQMPRGHQAHLNYGH 1049
RYDPDYDR+ RYVRV P Q FNP+P+ + FHD FPQ PR QA +NYG
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLQFHDAIFPQTPR-TQASINYG- 285
Query: 1050 HPLNPAMSPFINHPAAYTPWPNSPAMNYAHSLN 1148
HPLNPAM+ +YT WP S M YA +LN
Sbjct: 286 HPLNPAMT-----APSYTEWP-SATMTYAQTLN 312
>gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 356
Score = 298 bits (762), Expect = 2e-078
Identities = 176/348 (50%), Positives = 223/348 (64%), Gaps = 30/348 (8%)
Frame = +3
Query: 192 EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAAHRVA 371
+KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNP+Q QFEF FPTSYLRLAAHRVA
Sbjct: 16 DKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLAAHRVA 75
Query: 372 QHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFKIAIK 551
HYGL TM DN +VDG NRI+ KTAESR P +CLSEIP KQ E+ +PE KIAI+
Sbjct: 76 LHYGLQTMVQDN---SVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHIKIAIR 132
Query: 552 ARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAPPLTP 731
RP + S + + +G++++ R+VEERKEEYDKARARIF++P S DS+D+
Sbjct: 133 RRPNKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLP------QA 186
Query: 732 PPEVKNASVNRSEAEVAVSNNSL---DAGGGSRESGRTS-IAIIRDREKDRYDPDYDRSY 899
P + KN +N E E NS+ + R+SG +S +AI RDREKDR DPDYDRSY
Sbjct: 187 PADGKNLCLNGDENEGC--RNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDPDYDRSY 244
Query: 900 DRYVVD-PAYRYVRVMPSGQGFNPMPLHIPF--HDGGFPQMPRGHQAHLNYGHHPLNPAM 1070
+RYV + P + + P F+ + PF +D GFPQ+ + + + + P NP M
Sbjct: 245 ERYVRNLPTNQSFSLAP----FDAQKIQHPFLQYDTGFPQLGQIQRTQASLSYRPSNPIM 300
Query: 1071 SPF-------INHPAAYTPWPNSPAMNYAHSLNGPDTNLFRHPFASNP 1193
+PF + A Y WP S +M YAHS +F+ PF P
Sbjct: 301 NPFCAMGLNQTSRDAVYLQWP-SHSMMYAHSYEQFRHAVFQAPFCQQP 347
>gi|224086775|ref|XP_002307959.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 237 bits (603), Expect = 5e-060
Identities = 120/181 (66%), Positives = 142/181 (78%), Gaps = 3/181 (1%)
Frame = +3
Query: 159 SMAAAAAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPT 338
S A AAI EKE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNP+Q FEF FPT
Sbjct: 3 STTQQAVAAINEKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHFPT 62
Query: 339 SYLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPES 518
SYLRLAAHRVA HYGL+TM DNG +DG N+IL KTA+SR+P VCL+ IP KQ ES
Sbjct: 63 SYLRLAAHRVAHHYGLITMVQDNG---IDGLGNKILVQKTAQSRYPAVCLTAIPAKQLES 119
Query: 519 GRPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED 698
+PE K+AI+ RP +GS + +G GV++N RSVEERKE+YD+ARARIF+SP S +ED
Sbjct: 120 DKPEKIKLAIRPRPNKGSINDPNGFGVKRNPVRSVEERKEDYDRARARIFSSPSSPTAED 179
Query: 699 S 701
+
Sbjct: 180 T 180
>gi|224137642|ref|XP_002322608.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 228 bits (581), Expect = 2e-057
Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 3/181 (1%)
Frame = +3
Query: 159 SMAAAAAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPT 338
S A AAI EKE+M+DPFLVEALQNPRHRLTILRMELDIQ+F QNP+Q FEF FPT
Sbjct: 3 STTPQAVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPT 62
Query: 339 SYLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPES 518
SYLRLAAHRVAQHYGL+TM DNG +DG N+IL KTAE R+P V LSEIP KQ S
Sbjct: 63 SYLRLAAHRVAQHYGLITMVQDNG---IDGLLNKILVQKTAECRYPAVRLSEIPAKQSGS 119
Query: 519 GRPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED 698
PE K+AI+ RP +GS + +G G++++ RSVEERKEEYD+ARARIF+SP S ++D
Sbjct: 120 DTPEMIKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADD 179
Query: 699 S 701
+
Sbjct: 180 T 180
>gi|255561144|ref|XP_002521584.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 349
Score = 223 bits (566), Expect = 9e-056
Identities = 131/241 (54%), Positives = 160/241 (66%), Gaps = 12/241 (4%)
Frame = +3
Query: 183 AITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAAH 362
AIT+KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNP Q QFEF FPTSYLRLAAH
Sbjct: 6 AITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAAH 65
Query: 363 RVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFKI 542
RVAQHYGL+TM DN + DG N+IL KTAE R+P V L EIP KQ ES + E KI
Sbjct: 66 RVAQHYGLITMVQDN---SFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKI 122
Query: 543 AIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED---SSSLR 713
I+ RP +GS + + GV+Q+ RSVEERKEEYD+ARARIF+SP S++ +D S+
Sbjct: 123 VIRPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSID 182
Query: 714 APPLTP-PPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTSIAIIRDREKDRYDPDYD 890
P E++N + ++ E ++ G SR + +DR YD YD
Sbjct: 183 RKSTNPSKDELENCRYSANDPEKNINPRD---GAPSRVAIFRDRE--KDRTDPDYDRSYD 237
Query: 891 R 893
R
Sbjct: 238 R 238
>gi|255552461|ref|XP_002517274.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 350
Score = 221 bits (562), Expect = 3e-055
Identities = 133/248 (53%), Positives = 157/248 (63%), Gaps = 12/248 (4%)
Frame = +3
Query: 162 MAAAAAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTS 341
M +A I EKE+MVDPFLVEAL NP HRLTILRME DIQ+F Q P+Q QFEF FPTS
Sbjct: 1 MESALNRVINEKESMVDPFLVEALHNPSHRLTILRMEHDIQRFLQIPDQQQFEFQHFPTS 60
Query: 342 YLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESG 521
YLRLAAHRVAQHYGL+TM D G DG N+IL KTAESR+P VCL EIP KQ E
Sbjct: 61 YLRLAAHRVAQHYGLITMVQDYG---YDGLVNKILVKKTAESRYPAVCLCEIPAKQLERD 117
Query: 522 RPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED- 698
+PE KI I+ RP +GS + + GV+Q+ RSVEERKEEYD+ARARIF+SP S S+D
Sbjct: 118 KPEQVKIVIRPRPNKGSINECNEFGVKQSPVRSVEERKEEYDRARARIFSSPCSPSSDDI 177
Query: 699 -SSSLRAPPLTPPPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTSIAIIR--DREKD 869
S + T P E +N S ++ + D + R +I R DR
Sbjct: 178 VSHASIDGKSTSPSEDENEGCRNSASDPEKNIYPRDGA-----APRVAIFRDREKDRTDP 232
Query: 870 RYDPDYDR 893
YD YDR
Sbjct: 233 DYDRSYDR 240
>gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana]
Length = 351
Score = 210 bits (534), Expect = 5e-052
Identities = 110/183 (60%), Positives = 134/183 (73%), Gaps = 5/183 (2%)
Frame = +3
Query: 171 AAAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLR 350
+ A I +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+P+Q QFEF FPTSYLR
Sbjct: 9 SGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLR 68
Query: 351 LAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPE 530
LAAHRVA HYGL+T D G DG+++RI+ TK+++SRFP LSEIPVKQ E+G+ E
Sbjct: 69 LAAHRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFE 125
Query: 531 GFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSL 710
K+ IK RP +GSG G ++ L +SVEERKE+YD+ARARIFN + D DSSS
Sbjct: 126 HMKVVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSE 183
Query: 711 RAP 719
P
Sbjct: 184 TNP 186
>gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 351
Score = 209 bits (530), Expect = 1e-051
Identities = 109/183 (59%), Positives = 133/183 (72%), Gaps = 5/183 (2%)
Frame = +3
Query: 171 AAAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLR 350
+ A I +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+P+Q QFEF FPTSYLR
Sbjct: 9 SGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLR 68
Query: 351 LAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPE 530
AAHRVA HYGL+T D G DG+++RI+ TK+++SRFP LSEIPVKQ E+G+ E
Sbjct: 69 FAAHRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFE 125
Query: 531 GFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSL 710
K+ IK RP +GSG G ++ L +SVEERKE+YD+ARARIFN + D DSSS
Sbjct: 126 HMKVVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSE 183
Query: 711 RAP 719
P
Sbjct: 184 TNP 186
>gi|255636099|gb|ACU18394.1| unknown [Glycine max]
Length = 355
Score = 204 bits (518), Expect = 3e-050
Identities = 120/236 (50%), Positives = 149/236 (63%), Gaps = 8/236 (3%)
Frame = +3
Query: 192 EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAAHRVA 371
+KE+MVDPFLVEAL+NPRHR+TILRMELDIQ+F N + FEF FP+SYLRLAAHRVA
Sbjct: 16 DKESMVDPFLVEALENPRHRVTILRMELDIQRFLSNADYQHFEFQHFPSSYLRLAAHRVA 75
Query: 372 QHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFKIAIK 551
QHYG+ TM DNG +DG RI+ K AESR+P V LSEIP KQ E+ +PE KIAI+
Sbjct: 76 QHYGMQTMVQDNG---LDGQGTRIMVRKMAESRYPMVRLSEIPAKQLENDKPEKIKIAIR 132
Query: 552 ARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAPPLTP 731
RP + S + + +G + N RSVEERK EYD+ARARIF+S S DS+D +L
Sbjct: 133 PRPNKISLNEANEAGRKSNPPRSVEERKVEYDRARARIFSSSRSCDSDD--TLSQTSTDE 190
Query: 732 PPEVKNASVNRSEAEVAVSNNSLDAGGGSRESGRTSIAIIR--DREKDRYDPDYDR 893
+ N N + V + G S R +I R DR YD +Y+R
Sbjct: 191 KNSLINKDENETSKTPVVYSEQCSI-GRDINSTRVAILRDREKDRSDPDYDRNYER 245
>gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding R3H [Medicago
truncatula]
Length = 353
Score = 195 bits (494), Expect = 2e-047
Identities = 107/172 (62%), Positives = 128/172 (74%), Gaps = 4/172 (2%)
Frame = +3
Query: 195 KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAAHRVAQ 374
KE+MVDPFLVEALQNPRHRLTILRMELDIQKF N +Q FEF FP+SYLRLAAHRVAQ
Sbjct: 17 KESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQ 76
Query: 375 HYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPEGFKIAIKA 554
HYG+ TM D G +DG ++IL K ES++P V LSEIP KQ ++ + E KI I++
Sbjct: 77 HYGMQTMVQDIG---LDG-QSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQS 132
Query: 555 RPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSL 710
RP + S +G + S + N RSVEERKEEYD+ARARIFN S DS D+SS+
Sbjct: 133 RPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSM 184
>gi|149941242|emb|CAO02553.1| putative single-stranded nucleic acid binding R3H
[Vigna unguiculata]
Length = 131
Score = 142 bits (357), Expect = 2e-031
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Frame = +3
Query: 174 AAAAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRL 353
+ + +KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F N +Q FEF FP+SYLRL
Sbjct: 10 SVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRL 69
Query: 354 AAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTAESRFPCVCLSEIPVKQPESGRPE 530
AAHRVAQHY + TM D G +DG ++IL K ES++P V LSEIP KQ E+ + +
Sbjct: 70 AAHRVAQHYSMQTMVQDIG---LDGQGSKILVRKLPESKYPMVKLSEIPAKQLENDKSQ 125
>gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 126 bits (316), Expect = 9e-027
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+TEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNPEQLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILSMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 360 HRVAQHY 380
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 126 bits (314), Expect = 1e-026
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+TEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNPEQLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 360 HRVAQHY 380
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 124 bits (310), Expect = 4e-026
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +3
Query: 180 AAITEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFSPFPTSYLRLAA 359
AA+TEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNPEQLQ EF PFPTSY+R A
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFVA 61
Query: 360 HRVAQHY 380
HRVAQHY
Sbjct: 62 HRVAQHY 68
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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