BLASTX 7.6.2
Query= UN12914 /QuerySize=1875
(1874 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT... 877 2e-252
gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subu... 837 2e-240
gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit ... 812 4e-233
gi|225430812|ref|XP_002271463.1| PREDICTED: hypothetical protein... 763 4e-218
gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 ... 762 5e-218
gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens] 743 3e-212
gi|156070760|gb|ABU45175.1| unknown [Solanum melongena] 731 2e-208
gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subu... 731 2e-208
gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum] 729 6e-208
gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing facto... 725 9e-207
gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing facto... 725 9e-207
gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary... 720 4e-205
gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit ... 703 5e-200
gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [A... 700 3e-199
gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT... 700 4e-199
gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing fact... 697 2e-198
gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryz... 696 3e-198
gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit ... 689 4e-196
gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit ... 687 2e-195
gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana] 686 4e-195
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965
[Arabidopsis lyrata subsp. lyrata]
Length = 567
Score = 877 bits (2264), Expect = 2e-252
Identities = 459/549 (83%), Positives = 488/549 (88%), Gaps = 26/549 (4%)
Frame = +1
Query: 136 GGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSD------RRSRDRDVDRKSKE 297
GGEIEDQLD K + + RD+ERE SRSKDREREK D+D + RRSRDRD K KE
Sbjct: 26 GGEIEDQLDSKPKRDSRDHERETSRSKDREREKGRDRDRERDSEVSRRSRDRD-GEKGKE 84
Query: 298 RSRDRDGG---HHRSSRHRDRSRDRSDRRD---DDDDDHRRSRDRDYDRRRDD---RRRR 450
RSR++D HHRSSRHRD SRDRS+RR+ DDDD+RRSRDRD+DRRRDD RR R
Sbjct: 85 RSREKDRDRERHHRSSRHRDHSRDRSERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRIR 144
Query: 451 RSRSRSKDRSRHRRSRSPSKP-KRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI--- 618
RSRSRSKDRS RSPSK KRVSGFDMAPPASAMLAAGAA VT QVPPAPPT+
Sbjct: 145 RSRSRSKDRS----ERSPSKSNKRVSGFDMAPPASAMLAAGAA--VTGQVPPAPPTLPGA 198
Query: 619 GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMA 798
G+FPN+ LPTGQ+FGGL MMPIQAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVMA
Sbjct: 199 GMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMA 258
Query: 799 AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYN 978
AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYN
Sbjct: 259 AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYN 318
Query: 979 PSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGA 1158
PSLAA+LGPS PSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE QVRELLESFGA
Sbjct: 319 PSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGA 378
Query: 1159 LKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKP 1338
LKGFDLVKDRETGNSKGYAFCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN G MQPKP
Sbjct: 379 LKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMQPKP 438
Query: 1339 EQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGK 1518
EQESVL+HAQQQIAFQ MLQPG +AT VVCLTQVV EDELRDDEE+EDIMED+RQEGGK
Sbjct: 439 EQESVLLHAQQQIAFQRIMLQPGVMATTVVCLTQVVTEDELRDDEEYEDIMEDMRQEGGK 498
Query: 1519 FGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPED 1698
FGALT+VVIPRPSP GEPV GLGKVFLKY DTDGS+RAR+GMNGR+FGGNEVVAV+YPED
Sbjct: 499 FGALTNVVIPRPSPNGEPVPGLGKVFLKYADTDGSTRARTGMNGRKFGGNEVVAVYYPED 558
Query: 1699 KFDQGDYGA 1725
KF+QGDYGA
Sbjct: 559 KFEQGDYGA 567
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A
[Arabidopsis thaliana]
Length = 551
Score = 837 bits (2161), Expect = 2e-240
Identities = 445/561 (79%), Positives = 470/561 (83%), Gaps = 26/561 (4%)
Frame = +1
Query: 91 MTDFEDHAGNGAAVDG----------GEIEDQLDWKSQEERRDNERECSRSKDREREKSG 240
M++FEDH GNG D GEIEDQLD K + E RD+ERE SRSKDREREK
Sbjct: 1 MSEFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGR 60
Query: 241 DKDSDRRSRDRDVDRKSKERSRDRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDY 420
DKD R RD +V R RSRDRD G R RD+ RD +R SR+R
Sbjct: 61 DKD---RERDSEVSR----RSRDRD-GEKSKERSRDKDRDHRERHHRSSRHRDHSRERGE 112
Query: 421 DRRR-DDRRRRRSRSRSKDRSRHR-RSRSPSKPK-RVSGFDMAPPASAMLAAGAATPVTA 591
R R RR RRSRSRSKDRS R RSRSPSK K RVSGFDMAPPASAMLAAGAA VT
Sbjct: 113 RRERGGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAA--VTG 170
Query: 592 QVPPAPPTI---GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANE 762
QVPPAPPT+ G+FPN+ LPTGQ+FGGL MMPIQAMTQQATRHARRVYVGGLSP ANE
Sbjct: 171 QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANE 230
Query: 763 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 942
QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG
Sbjct: 231 QSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEG 290
Query: 943 APVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 1122
APVKVRRPSDYNPSLAA+LGPS PSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE
Sbjct: 291 APVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTE 350
Query: 1123 LQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTV 1302
QVRELLESFG LKGFDLVKDRETGNSKGYAFCVYQ+++VTDIACAALNGIKMGDKTLTV
Sbjct: 351 SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 410
Query: 1303 RRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFE 1482
RRAN G M KPEQE+VL+HAQQQIAFQ MLQPG VAT VVCLTQVV EDELRDDEE+
Sbjct: 411 RRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYG 470
Query: 1483 DIMEDVRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFG 1662
DIMED+RQEGGKFGALT+VVIPRPSP GEPVAGLGKVFLKY DTDGS+RAR GMNGR+FG
Sbjct: 471 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 530
Query: 1663 GNEVVAVFYPEDKFDQGDYGA 1725
GNEVVAV+YPEDKF+QGDYGA
Sbjct: 531 GNEVVAVYYPEDKFEQGDYGA 551
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 573
Score = 812 bits (2097), Expect = 4e-233
Identities = 426/530 (80%), Positives = 458/530 (86%), Gaps = 16/530 (3%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDRE-REKSGDKDSDR-RSRDRDVDRKSKERSRDRDGGHHRSSR 339
+S++ R+ R+ R +D E +S D+D ++ + R RD DR +ER R H SR
Sbjct: 50 RSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRER-HHRSSRHRDHSR 108
Query: 340 HRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPS 507
R R+R R DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPS
Sbjct: 109 ERGERRERGGR---DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165
Query: 508 KPK-RVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLP 675
K K RVSGFDMAPPASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLS 223
Query: 676 MMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 855
MMPIQAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN
Sbjct: 224 MMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 283
Query: 856 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLA 1035
HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLA
Sbjct: 284 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLA 343
Query: 1036 AVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYA 1215
AVGLTPGASGGLEGPDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYA
Sbjct: 344 AVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYA 403
Query: 1216 FCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNM 1395
FCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ M
Sbjct: 404 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVM 463
Query: 1396 LQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPV 1575
LQPG VAT VVCLTQVV EDELRDDEE+ DIMED+RQEGGKFGALT+VVIPRPSP GEPV
Sbjct: 464 LQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPV 523
Query: 1576 AGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDYGA 1725
AGLGKVFLKY DTDGS+RAR GMNGR+FGGNEVVAV+YPEDKF+QGDYGA
Sbjct: 524 AGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 573
>gi|225430812|ref|XP_002271463.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 565
Score = 763 bits (1968), Expect = 4e-218
Identities = 393/536 (73%), Positives = 446/536 (83%), Gaps = 13/536 (2%)
Frame = +1
Query: 139 GEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDVDRKSKERSRDRD 315
G +D D KSQ R+ +RE S+S++REREK DKD +R R R+RD +R ++R RD++
Sbjct: 32 GGPDDYSDSKSQHGSREYQRESSKSREREREKGRDKDRERDRDRERDKER-DRDRDRDKE 90
Query: 316 GGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRD----RDYDRRRDDRRRRRSRSRSKDRSR 483
R R+RDRS R RD DDDD RSRD RD+DR RDDR +RRSRSRSK RS
Sbjct: 91 RDRDRRDRYRDRSDRRERTRDRDDDDFHRSRDYDRRRDFDRDRDDRHKRRSRSRSKGRSE 150
Query: 484 HR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI-GVFPNIMSLPT 651
R RS S SK KRVSGFDMAPPASAMLA AA Q+P PTI G+FPN+ L +
Sbjct: 151 QRSRSRSASLSKSKRVSGFDMAPPASAMLAGAAA--AAGQIPGTTPTIPGMFPNMFPLAS 208
Query: 652 GQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGD 831
GQ FG LP+MP+QAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVM+A+GGNTAGPGD
Sbjct: 209 GQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGD 267
Query: 832 AVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSH 1011
AVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAA+LGPS
Sbjct: 268 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 327
Query: 1012 PSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRE 1191
P+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLVKDRE
Sbjct: 328 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 387
Query: 1192 TGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQ 1371
TGNSKGYAFCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN GA QPKPEQE+VL+HAQQ
Sbjct: 388 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQ 447
Query: 1372 QIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPR 1551
QIA Q M QPG +AT VVCLTQVVN DEL+DDE +EDI+ED+R EGGKFG L +V IPR
Sbjct: 448 QIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPR 507
Query: 1552 PSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
P P GEP GLGKVFL+Y D DG+++AR+G+NGR+F GN+VVAVFYPE+KF QG+Y
Sbjct: 508 PKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENKFSQGEY 563
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis
vinifera]
Length = 565
Score = 762 bits (1967), Expect = 5e-218
Identities = 393/536 (73%), Positives = 445/536 (83%), Gaps = 13/536 (2%)
Frame = +1
Query: 139 GEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDVDRKSKERSRDRD 315
G +D D KSQ R+ +RE S+S++REREK DKD +R R R+RD +R ++R RD++
Sbjct: 32 GGPDDYSDSKSQHGSREYQRESSKSREREREKGRDKDRERDRDRERDKER-DRDRDRDKE 90
Query: 316 GGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRD----RDYDRRRDDRRRRRSRSRSKDRSR 483
R R+RDRS R RD DDDD RSRD RD+DR RDDR +RRSRSRSK RS
Sbjct: 91 RDRDRRDRYRDRSDRRERTRDRDDDDFHRSRDYDRRRDFDRDRDDRHKRRSRSRSKGRSE 150
Query: 484 HR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI-GVFPNIMSLPT 651
R RS S SK KRVSGFDMAPPASAMLA AA Q+P PTI G+FPN+ L +
Sbjct: 151 QRSRSRSASLSKSKRVSGFDMAPPASAMLAGAAA--AAGQIPGTTPTIPGMFPNMFPLAS 208
Query: 652 GQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGD 831
GQ FG LP+MP+QAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVM+A+GGNTAGPGD
Sbjct: 209 GQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGD 267
Query: 832 AVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSH 1011
AVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAA+LGPS
Sbjct: 268 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 327
Query: 1012 PSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRE 1191
P+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLVKDRE
Sbjct: 328 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 387
Query: 1192 TGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQ 1371
TGNSKGYAFCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN GA QPKPEQE+VL+HAQQ
Sbjct: 388 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQ 447
Query: 1372 QIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPR 1551
QIA Q M QPG +AT VVCLTQVVN DEL+DDE +EDI+ED+R EGGKFG L +V IPR
Sbjct: 448 QIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPR 507
Query: 1552 PSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
P P GEP GLGKVFL+Y D DG+ +AR+G+NGR+F GN+VVAVFYPE+KF QG+Y
Sbjct: 508 PKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENKFSQGEY 563
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 743 bits (1917), Expect = 3e-212
Identities = 391/558 (70%), Positives = 445/558 (79%), Gaps = 20/558 (3%)
Frame = +1
Query: 91 MTDFEDHA-GNGAAVDGGEIEDQLDWKSQEERRDNERE--CSRSKDREREKSGDKDSDR- 258
M ++E + N +D D KSQ RD E+E SRS+++ERE+ DKD DR
Sbjct: 1 MEEYEGNGEDNNNNIDNNVSSPYSDSKSQHTSRDPEKERGSSRSREKERERGRDKDRDRN 60
Query: 259 RSRDRDVDRKSKERSRDRDGGHHRSSRHRDRSRDRSDRRD-------DDDDDHRRSRDRD 417
R RDR +R K+R RDR+ R HRDR RDRSDRR+ D+DD H R RD
Sbjct: 61 RDRDRGKER-DKDRDRDREKEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLH---RTRD 116
Query: 418 YDRRRDDRRRRRSRSRSKDRSRHR-RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQ 594
YDRRRD+ + R R R K SR R RSRSPSK KR+SGFDMAPP SA+L AT VT Q
Sbjct: 117 YDRRRDNDKDREDRQRHKPSSRGRSRSRSPSKSKRISGFDMAPPTSALLP--GATDVTGQ 174
Query: 595 VPPAPPTI-GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSV 771
VP A P+I G+F N+ L GQ FG LP+MP+QAMTQQATRHARRVYVGGL P ANEQSV
Sbjct: 175 VPGANPSIPGMFSNMFPLAAGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSV 233
Query: 772 ATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPV 951
ATFFS VM A+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDG+IFEG PV
Sbjct: 234 ATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPV 293
Query: 952 KVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQV 1131
KVRRPSDYNPSLAA+LGPS PSP+LNLAAVGLTPG+SGGLEGPDRIFVGGLPYYFTE Q+
Sbjct: 294 KVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQI 353
Query: 1132 RELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRA 1311
RELLESFG L+GFDLVKDRETGNSKGYAFCVYQ+V+VTDIACAALNGIKMGDKTLTVRRA
Sbjct: 354 RELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRA 413
Query: 1312 NLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIM 1491
N G QP PEQESVL+HAQQQIA Q MLQPG +AT V+CLTQVV+ DEL DD++++DI+
Sbjct: 414 NQGTNQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTQVVSVDELNDDDDYQDIL 473
Query: 1492 EDVRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNE 1671
ED+R E GKFG+L +VVIPRP+P GEP GLGKVFL+Y D + SSRAR G+NGR+FGGNE
Sbjct: 474 EDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGKVFLEYADVESSSRARQGLNGRKFGGNE 533
Query: 1672 VVAVFYPEDKFDQGDYGA 1725
V+AVFYPE+KF +G+Y A
Sbjct: 534 VIAVFYPENKFSEGEYEA 551
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 731 bits (1885), Expect = 2e-208
Identities = 374/522 (71%), Positives = 431/522 (82%), Gaps = 12/522 (2%)
Frame = +1
Query: 187 DNERECSRSKDREREKSGDKDSDR-RSRDRDVDR---KSKERSRDRDGGHHRSSRHRDRS 354
+ +R+ SRS+++EREK +KD DR R+RDRD DR + K+R R+R+ R HRDR
Sbjct: 33 EKDRDSSRSREKEREKGREKDHDRDRNRDRDRDRVKERDKDRDREREREKDRDRHHRDRH 92
Query: 355 RDRSDRRD--DDDDDHRRSRDRDYDRRRDDRRRRRSRSRSKDRSRHR-RSRSPSKPKRVS 525
RDRSDRR+ D D+ R RDYDRRR++ + R R R K SR R RSRSPSK KR+S
Sbjct: 93 RDRSDRRERSRDRDEDDLPRTRDYDRRRNNDKDREDRHRHKPSSRARSRSRSPSKSKRIS 152
Query: 526 GFDMAPPASAMLAAGAATPVTAQVP--PAPPTIGVFPNIMSLPTGQAFGGLPMMPIQAMT 699
GFDMAPP SA+L+ AT V QVP P G+F N+ + GQ FG LP+MP+QAMT
Sbjct: 153 GFDMAPPTSALLS--GATDVAGQVPGITNPSIPGMFSNMFPVAAGQ-FGALPVMPVQAMT 209
Query: 700 QQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFV 879
QQATRHARRVYVGGL P ANEQSVATFFS VM A+GGNTAGPGDAVVNVYINHEKKFAFV
Sbjct: 210 QQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFV 269
Query: 880 EMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGA 1059
EMRSVEEASNAM+LDG+IFEG PVKVRRPSDYNPSLAA+LGPS PSP+LNLAAVGLTPG+
Sbjct: 270 EMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGS 329
Query: 1060 SGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVA 1239
SGGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQ+V+
Sbjct: 330 SGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVS 389
Query: 1240 VTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVAT 1419
VTDIACAALNGIKMGDKTLTVRRAN G QP PEQESVL+HAQQQIA Q MLQPG +AT
Sbjct: 390 VTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQESVLLHAQQQIALQRFMLQPGALAT 449
Query: 1420 MVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFL 1599
++CLTQVV+ DEL+DD++++DI+ED+R E GKFGAL +VVIPRP+P GEP GLGKVFL
Sbjct: 450 KILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFL 509
Query: 1600 KYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDYGA 1725
+Y D D SS+AR G+NGR+FGGN+V+AVFYPE+KF +GDY A
Sbjct: 510 EYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA 551
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum
melongena]
Length = 554
Score = 731 bits (1885), Expect = 2e-208
Identities = 374/522 (71%), Positives = 431/522 (82%), Gaps = 12/522 (2%)
Frame = +1
Query: 187 DNERECSRSKDREREKSGDKDSDR-RSRDRDVDR---KSKERSRDRDGGHHRSSRHRDRS 354
+ +R+ SRS+++EREK +KD DR R+RDRD DR + K+R R+R+ R HRDR
Sbjct: 34 EKDRDSSRSREKEREKGREKDHDRDRNRDRDRDRVKERDKDRDREREREKDRDRHHRDRH 93
Query: 355 RDRSDRRD--DDDDDHRRSRDRDYDRRRDDRRRRRSRSRSKDRSRHR-RSRSPSKPKRVS 525
RDRSDRR+ D D+ R RDYDRRR++ + R R R K SR R RSRSPSK KR+S
Sbjct: 94 RDRSDRRERSRDRDEDDLPRTRDYDRRRNNDKDREDRHRHKPSSRARSRSRSPSKSKRIS 153
Query: 526 GFDMAPPASAMLAAGAATPVTAQVP--PAPPTIGVFPNIMSLPTGQAFGGLPMMPIQAMT 699
GFDMAPP SA+L+ AT V QVP P G+F N+ + GQ FG LP+MP+QAMT
Sbjct: 154 GFDMAPPTSALLS--GATDVAGQVPGITNPSIPGMFSNMFPVAAGQ-FGALPVMPVQAMT 210
Query: 700 QQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFV 879
QQATRHARRVYVGGL P ANEQSVATFFS VM A+GGNTAGPGDAVVNVYINHEKKFAFV
Sbjct: 211 QQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFV 270
Query: 880 EMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGA 1059
EMRSVEEASNAM+LDG+IFEG PVKVRRPSDYNPSLAA+LGPS PSP+LNLAAVGLTPG+
Sbjct: 271 EMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGS 330
Query: 1060 SGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVA 1239
SGGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQ+V+
Sbjct: 331 SGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVS 390
Query: 1240 VTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVAT 1419
VTDIACAALNGIKMGDKTLTVRRAN G QP PEQESVL+HAQQQIA Q MLQPG +AT
Sbjct: 391 VTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQESVLLHAQQQIALQRFMLQPGALAT 450
Query: 1420 MVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFL 1599
++CLTQVV+ DEL+DD++++DI+ED+R E GKFGAL +VVIPRP+P GEP GLGKVFL
Sbjct: 451 KILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFL 510
Query: 1600 KYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDYGA 1725
+Y D D SS+AR G+NGR+FGGN+V+AVFYPE+KF +GDY A
Sbjct: 511 EYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA 552
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 729 bits (1880), Expect = 6e-208
Identities = 372/528 (70%), Positives = 431/528 (81%), Gaps = 16/528 (3%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDVDRKSKERSRDRDGGHHRSSRH 342
+ R+ ERE R KDR+R+++ D+D DR R ++RD DR ++R R++D H RH
Sbjct: 35 RGSSRSREKEREKGRDKDRDRDRNIDRDRDRDRVKERDKDR-DRDREREKDRDRHHRDRH 93
Query: 343 RDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRRRRRSRSR----SKDRSRHR---RSRS 501
RDRS R RD D+DD +R+ RDYDRRRD+ + R R R S+ RS HR RSRS
Sbjct: 94 RDRSDRRERTRDRDEDDLQRT--RDYDRRRDNDKDREDRQRHKPSSRGRSEHRSRSRSRS 151
Query: 502 PSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPA--PPTIGVFPNIMSLPTGQAFGGLP 675
PSK KR+SGFDMAPP SA+L+ AT V QVP P G+F N+ L GQ FG LP
Sbjct: 152 PSKSKRISGFDMAPPTSALLS--GATDVAGQVPGTTNPSIPGMFSNMFPLAAGQ-FGALP 208
Query: 676 MMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 855
+MP+QAMTQQATRHARRVYVGGL P ANEQSVATFFS VM A+GGNTAGPGDAVVNVYIN
Sbjct: 209 IMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYIN 268
Query: 856 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLA 1035
HEKKFAFVEMRSVEEASNAM+LDG++FEG PVKVRRPSDYNPSLAA+LGPS PSP+LNLA
Sbjct: 269 HEKKFAFVEMRSVEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLA 328
Query: 1036 AVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYA 1215
AVGLTPG+SGGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLVKDRETGNSKGYA
Sbjct: 329 AVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYA 388
Query: 1216 FCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNM 1395
FCVYQ+V+VTDIACAALNGIKMGDKTLTVRRAN G QP PEQESVL+HAQQQIA Q M
Sbjct: 389 FCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFM 448
Query: 1396 LQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPV 1575
LQPG +AT V+CLT+VV+ DEL+DD++++DI+ED+R E GKFGAL +VVIPRP+P GEP
Sbjct: 449 LQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPT 508
Query: 1576 AGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
GLGKVFL+Y D D SS+AR G+NGR+FGGN+V+AVFYPE+KF +GDY
Sbjct: 509 PGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDY 556
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large
subunit A; AltName: Full=NpU2AF65a; AltName: Full=U2 auxiliary factor
65 kDa subunit A; AltName: Full=U2 small nuclear ribonucleoprotein
auxiliary factor large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
Length = 555
Score = 725 bits (1870), Expect = 9e-207
Identities = 380/552 (68%), Positives = 436/552 (78%), Gaps = 18/552 (3%)
Frame = +1
Query: 106 DHAGNGAAVDGGEI-EDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDV 279
D NGA+ I D + + RD ER+ R KDR+R+++ D+D DR R ++RD
Sbjct: 10 DIDNNGASPYSQHISRDHENERDSSRSRDKERDKGRDKDRDRDRNRDRDRDRDRVKERDK 69
Query: 280 DRKSKERSRDRDGGHHRSSRHRDRS--RDRSDRRDDDDDDHRRSRDRDYDRRRDDRR--- 444
DR ++R ++D H RHRDRS R+R RD D+DD RS RDYDRRRD+ +
Sbjct: 70 DR-HRDRDGEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRS--RDYDRRRDNDKDRE 126
Query: 445 -RRRSRSRSKDRSRHR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPP 612
RRR R S+ RS HR RSRSPSK KR+SGFDMAPP +A+L AT QVP P
Sbjct: 127 DRRRHRPSSRGRSEHRSKSRSRSPSKSKRISGFDMAPPTTALLP--GATDAAGQVPGTNP 184
Query: 613 TI-GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQ 789
I G+F N+ L + Q FG LPMMP+QAMTQQATRHARRVYVGGL P ANEQSVATFFS
Sbjct: 185 AIPGLFSNMFPLASSQ-FGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSH 243
Query: 790 VMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPS 969
VM A+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDG+IFEG PVKVRRPS
Sbjct: 244 VMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPS 303
Query: 970 DYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLES 1149
DYNPSLAA+LGPS PSP+LNLAAVG TPG+SGGLEGPDRIFVGGLPYYFTE Q+RELLES
Sbjct: 304 DYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLES 363
Query: 1150 FGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQ 1329
FG L+GFDLVKDRETGNSKGYAFCVYQ+V+VTDIACAALNGIKMGDKTLTVRRAN G Q
Sbjct: 364 FGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQ 423
Query: 1330 PKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQE 1509
P PEQESVL+HAQQQIA Q MLQPG +AT V+CLT+VV DEL DD++++DI+ED+R E
Sbjct: 424 PNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRTE 483
Query: 1510 GGKFGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFY 1689
KFGAL +VVIPRP+P G P GLGKVFL+Y D DGSS+AR G+NGR+FGGN+VVAVFY
Sbjct: 484 CEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFY 543
Query: 1690 PEDKFDQGDYGA 1725
PE+KF +GDY A
Sbjct: 544 PENKFSEGDYEA 555
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large
subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor
65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein
auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
Length = 573
Score = 725 bits (1870), Expect = 9e-207
Identities = 376/540 (69%), Positives = 433/540 (80%), Gaps = 19/540 (3%)
Frame = +1
Query: 148 EDQLDWKSQEERRDNE--RECSRSKDREREKSGDKDSDR-RSRDRDVDR-----KSKERS 303
+D D KSQ R+NE R+ SRS++++RE+ DKD DR R RDR DR + K+R
Sbjct: 35 DDYSDSKSQHSSRENEKDRDSSRSREKDRERGRDKDRDRDRDRDRGRDRDRGRDRDKDRE 94
Query: 304 RDRDGGHHRSSRHRDRS--RDRSDRRDDDDDDHRRSRDRDYDRR--RDDRRRRRSRSRSK 471
R++D H RHRDRS R++ RD DDDD R+RD D R +D R R RSRS+
Sbjct: 95 REKDRDRHHGDRHRDRSDRREKERTRDRDDDDRHRTRDYDQQREHAKDRESRHRHRSRSR 154
Query: 472 DRSRHR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPA-PPTIGVFPNIM 639
RS HR RSRS SK KR+SGFDMAPP SAML T QVP PP G+FPN+
Sbjct: 155 GRSEHRSRSRSRSRSKSKRISGFDMAPPTSAMLP--GITAAAGQVPGTNPPIPGMFPNMF 212
Query: 640 SLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTA 819
L +GQ FG LP+MPIQAMTQQATRHARRVYVGGL ANEQSVATFFS VM+A+GGNTA
Sbjct: 213 PLASGQ-FGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTA 271
Query: 820 GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASL 999
GPGDAVVNVYIN+EKKFAFVEMRSVEEASNAM+LDGIIFEGAP KVRRPSDYNPSLAA+L
Sbjct: 272 GPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATL 331
Query: 1000 GPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLV 1179
GPS P+P+LNLAAVGL+PG++GGLEGPDRIFVGGLPYYFTE Q+RELLESFG L+GFDLV
Sbjct: 332 GPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 391
Query: 1180 KDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLM 1359
KDRETGNSKGYAFCVYQ+V+VTDIACAALNGIKMGDKTLTVRRAN G QPKPEQESVL+
Sbjct: 392 KDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLL 451
Query: 1360 HAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSV 1539
HAQQQIA Q MLQP +AT V+ LT+V++ DEL DDE+++DI+ED+R E GKFG+L +V
Sbjct: 452 HAQQQIALQRLMLQPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNV 511
Query: 1540 VIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
VIPRPSP GEP G+GKVFL+Y D D SS+AR +NGR+FGGN+VVAVFYPE+KF +GDY
Sbjct: 512 VIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDY 571
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor;
19096-22891 [Arabidopsis thaliana]
Length = 568
Score = 720 bits (1856), Expect = 4e-205
Identities = 374/554 (67%), Positives = 437/554 (78%), Gaps = 22/554 (3%)
Frame = +1
Query: 88 QMTDFEDHAGNGAAVDGGEIEDQLDWKSQEERRDNE--RECSRSKDREREKSGDKDSDRR 261
+ + F + + + + D + ++ K E RD + ++ R KDR+REKS D+D + +
Sbjct: 25 ESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDRE-K 83
Query: 262 SRDRDVDRKSKERSRDRDGGHHRSSRHRDRSRDRSDRRDD-DDDDHRRSRDRD----YDR 426
SRDRD DR ERS+DR H RHRDRSR+RS++RDD DDD HRRSRDRD DR
Sbjct: 84 SRDRDRDR---ERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDR 140
Query: 427 RRDDRRRRRSRSRSKDRSRHRRSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPA 606
R+ R RRRSRSRS+ RS R S KR SGFDMAPP MLAA A QVP
Sbjct: 141 DREVRHRRRSRSRSRSRSERRSS------KRRSGFDMAPP--DMLAATAVAAAAGQVPSV 192
Query: 607 PPTI---GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVAT 777
P T G+F N+ + GQ G LP++P+QAMTQQATRHARRVYVGGL P ANEQSV+T
Sbjct: 193 PTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVST 252
Query: 778 FFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKV 957
FFSQVM+A+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGII EG PVKV
Sbjct: 253 FFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKV 312
Query: 958 RRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRE 1137
RRP+DYNPSLAA+LGPS P+P+LNL AVGL+ G++GGLEGPDRIFVGGLPYYFTE+Q+RE
Sbjct: 313 RRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRE 372
Query: 1138 LLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANL 1317
LLESFG L+GF+LVKDRETGNSKGYAFCVYQ+ +VTDIACAALNGIKMGDKTLTVRRA
Sbjct: 373 LLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQ 432
Query: 1318 GAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMED 1497
GA+QPKPEQE VL++AQQQIA Q M QPG T +VCLTQVV D+LRDDEE+ +IMED
Sbjct: 433 GAIQPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMED 492
Query: 1498 VRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVV 1677
+RQEGGKFG L +VVIPRP+P +P G+GKVFL+Y D DGSS+ARSGMNGR+FGGN+VV
Sbjct: 493 MRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVV 552
Query: 1678 AVFYPEDKFDQGDY 1719
AV+YPEDK+ QGDY
Sbjct: 553 AVYYPEDKYAQGDY 566
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis
thaliana]
Length = 589
Score = 703 bits (1812), Expect = 5e-200
Identities = 369/543 (67%), Positives = 424/543 (78%), Gaps = 20/543 (3%)
Frame = +1
Query: 118 NGAAVDGGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKE 297
NG DG + D+ + +E+ RD +RE SR +DR+RE+S D+ DR RDR DR S+E
Sbjct: 56 NGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDR-SRE 114
Query: 298 RSR---DRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRRRRRSRSRS 468
RS D D HHR SR RDR R R RD + RRSR R R RRSRS
Sbjct: 115 RSEKRDDLDDDHHRRSRDRDRRRSRD--RDREVRHRRRSRSRS-----RSRSERRSRSEH 167
Query: 469 KDRSRHR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFP 630
+ +S HR RSRS SK KR SGFDMAPP MLAA A QVP P T G+F
Sbjct: 168 RHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAA-TAVAAAGQVPSVPTTATIPGMFS 224
Query: 631 NIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGG 810
N+ + GQ G LP++P+QAMTQQATRHARRVYVGGL P ANEQSV+TFFSQVM+A+GG
Sbjct: 225 NMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGG 284
Query: 811 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLA 990
NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGII EG PVKVRRP+DYNPSLA
Sbjct: 285 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLA 344
Query: 991 ASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGF 1170
A+LGPS P+P+LNL AVGL+ G++GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG L+GF
Sbjct: 345 ATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGF 404
Query: 1171 DLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQES 1350
+LVKDRETGNSKGYAFCVYQ+ +VTDIACAALNGIKMGDKTLTVRRA GA+QPKPEQE
Sbjct: 405 NLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEE 464
Query: 1351 VLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGAL 1530
VL++AQQQIA Q M QPG T +VCLTQVV D+LRDDEE+ +IMED+RQEGGKFG L
Sbjct: 465 VLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNL 524
Query: 1531 TSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQ 1710
+VVIPRP+P +P G+GKVFL+Y D DGSS+ARSGMNGR+FGGN+VVAV+YPEDK+ Q
Sbjct: 525 VNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQ 584
Query: 1711 GDY 1719
GDY
Sbjct: 585 GDY 587
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis
thaliana]
Length = 589
Score = 700 bits (1805), Expect = 3e-199
Identities = 368/543 (67%), Positives = 423/543 (77%), Gaps = 20/543 (3%)
Frame = +1
Query: 118 NGAAVDGGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKE 297
NG DG + D+ + +E+ RD +RE SR +DR+RE+S D+ DR RDR DR S+E
Sbjct: 56 NGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDR-SRE 114
Query: 298 RSR---DRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRRRRRSRSRS 468
RS D D HHR SR RDR R R RD + RRSR R R RRSRS
Sbjct: 115 RSEKRDDLDDDHHRRSRDRDRRRSRD--RDREVRHRRRSRSRS-----RSRSERRSRSEH 167
Query: 469 KDRSRHR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFP 630
+ +S HR RSRS SK KR SGFDMAPP MLAA A QVP P T G+F
Sbjct: 168 RHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAA-TAVAAAGQVPSVPTTATIPGMFS 224
Query: 631 NIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGG 810
N+ + GQ G LP++P+QAMTQQATRHA RVYVGGL P ANEQSV+TFFSQVM+A+GG
Sbjct: 225 NMFPMVPGQQLGALPVLPVQAMTQQATRHAPRVYVGGLPPTANEQSVSTFFSQVMSAIGG 284
Query: 811 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLA 990
NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGII EG PVKVRRP+DYNPSLA
Sbjct: 285 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLA 344
Query: 991 ASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGF 1170
A+LGPS P+P+LNL AVGL+ G++GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG L+GF
Sbjct: 345 ATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGF 404
Query: 1171 DLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQES 1350
+LVKDRETGNSKGYAFCVYQ+ +VTDIACAALNGIKMGDKTLTVRRA GA+QPKPEQE
Sbjct: 405 NLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEE 464
Query: 1351 VLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGAL 1530
VL++AQQQIA Q M QPG T +VCLTQVV D+LRDDEE+ +IMED+RQEGGKFG L
Sbjct: 465 VLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNL 524
Query: 1531 TSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQ 1710
+VVIPRP+P +P G+GKVFL+Y D DGSS+ARSGMNGR+FGGN+VVAV+YPEDK+ Q
Sbjct: 525 VNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQ 584
Query: 1711 GDY 1719
GDY
Sbjct: 585 GDY 587
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241
[Arabidopsis lyrata subsp. lyrata]
Length = 589
Score = 700 bits (1804), Expect = 4e-199
Identities = 365/525 (69%), Positives = 421/525 (80%), Gaps = 13/525 (2%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKERS--RDRDGGHHRSSR 339
+ +E+ RD +RE +S+DR+RE+S D++ DR RDR DR S+ERS R+R+
Sbjct: 69 RDREKSRDRDRE--KSRDRDRERSKDRERDRHHRDRHRDR-SRERSEKRERERDDLDDDH 125
Query: 340 HRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRR-RRRSRSRSKDRSRHR-RSRSPSKP 513
HR RSRDR RD D + R R R R R +RR R R +S+ RSR R +SRS SK
Sbjct: 126 HRHRSRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSQSRSRSKS 185
Query: 514 KRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLPMMP 684
KR SGFDMAPP MLAA A QVP P T G+FPN+ + GQ G LP++P
Sbjct: 186 KRRSGFDMAPP--DMLAA-TAVAAAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLP 242
Query: 685 IQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEK 864
+QAMTQQATRHARRVYVGGL P ANEQSVATFFSQVM+A+GGNTAGPGDAVVNVYINHEK
Sbjct: 243 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEK 302
Query: 865 KFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVG 1044
KFAFVEMRSVEEASNAM+LDGII EG PVKVRRP+DYNPSLAA+LGPS P+P+LNLAAVG
Sbjct: 303 KFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVG 362
Query: 1045 LTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCV 1224
L+ G++GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG L+GF+LVKDRETGNSKGYAFCV
Sbjct: 363 LSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCV 422
Query: 1225 YQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQP 1404
YQ+ +VTDIACAALNGIKMGDKTLTVRRA G +QPKPEQE VL+HAQQQIA Q MLQP
Sbjct: 423 YQDPSVTDIACAALNGIKMGDKTLTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQP 482
Query: 1405 GPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPVAGL 1584
G T +VCLTQVV D+LRDDEE+ DIMED+RQEGGKFG L +VVIPRP+P +P G+
Sbjct: 483 GGTPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGV 542
Query: 1585 GKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
GKVFL+Y D DGSS+ARSGMNGR+FGGN+VVAV+YPEDK+ QGDY
Sbjct: 543 GKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDY 587
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large
subunit B; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit
B; Short=U2 snRNP auxiliary factor large subunit B
Length = 548
Score = 697 bits (1798), Expect = 2e-198
Identities = 360/549 (65%), Positives = 421/549 (76%), Gaps = 11/549 (2%)
Frame = +1
Query: 103 EDHAGNGAAVDGGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDV 279
+DHA VDGG E + + +++ R KD++RE+ D+D DR R RDRD
Sbjct: 3 DDHAAAADLVDGGRPEGDTHSREDGLSKPRDKDREREKDKDRERHRDRDRDRGRDRDRDK 62
Query: 280 DR-----KSKERSRDRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRR 444
D+ K ++R RDRD R RH R+ DR DD D R +R D RD RR
Sbjct: 63 DKEKDRDKERDRDRDRDKDRDRHHRHHRERREHRDRSDDHDRHRSRDSERRRDHERDGRR 122
Query: 445 RRRSRSRSKDRSRHR--RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI 618
R RSRSRS+ R R R RSRS SK KRVSGFDMAPPA A++ A P +Q P
Sbjct: 123 RHRSRSRSRSRGRDRRSRSRSRSKSKRVSGFDMAPPAQAVVPQFPAIPTPSQF-PGTAIP 181
Query: 619 GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMA 798
G+FPN++ + GQ F L + P QAMTQQATRHARRVYVGGL P ANEQSVA +F+QVMA
Sbjct: 182 GMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMA 239
Query: 799 AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYN 978
A+GGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAM+LDGI+FEGAPVKVRRP+DYN
Sbjct: 240 AIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYN 299
Query: 979 PSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGA 1158
PSLAA+LGPS PSP+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE QVRELLESFG
Sbjct: 300 PSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGP 359
Query: 1159 LKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKP 1338
L+GFDLVKDRETGNSKGYAFCVYQ++ VTDIACAALNGIKMGDKTLTVRRAN GA QP+P
Sbjct: 360 LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRP 419
Query: 1339 EQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGK 1518
EQES+L+ AQQQ+ Q + Q G + T VVCLTQVV+ DEL+DDEE+EDIMED+R E GK
Sbjct: 420 EQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGK 479
Query: 1519 FGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPED 1698
+G L VVIPRP P G PVAG+GKVFL+Y D DG+++A++ M+GR+FGGN VVAVFYPE+
Sbjct: 480 YGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPEN 539
Query: 1699 KFDQGDYGA 1725
KF +Y A
Sbjct: 540 KFSSAEYDA 548
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica
Group]
Length = 548
Score = 696 bits (1796), Expect = 3e-198
Identities = 360/549 (65%), Positives = 421/549 (76%), Gaps = 11/549 (2%)
Frame = +1
Query: 103 EDHAGNGAAVDGGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDR-RSRDRDV 279
+DHA VDGG E + + +++ R KD++RE+ D+D DR R RDRD
Sbjct: 3 DDHAAAADLVDGGRPEGDTHSREDGLSKPRDKDREREKDKDRERHRDRDRDRGRDRDRDK 62
Query: 280 DR-----KSKERSRDRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRR 444
D+ K ++R RDRD R RH R+ DR DD D R +R D RD RR
Sbjct: 63 DKEKDRDKERDRDRDRDKDRDRHHRHHRERREHRDRSDDHDRHRSRDSERRRDHERDGRR 122
Query: 445 RRRSRSRSKDRSRHR--RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI 618
R RSRSRS+ R R R RSRS SK KRVSGFDMAPPA A++ A P +Q P
Sbjct: 123 RHRSRSRSRSRGRDRRSRSRSRSKSKRVSGFDMAPPAQAVVPQFPAIPTPSQF-PGTAIP 181
Query: 619 GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMA 798
G+FPN++ + GQ F L + P QAMTQQATRHARRVYVGGL P ANEQSVA +F+QVMA
Sbjct: 182 GMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMA 239
Query: 799 AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYN 978
A+GGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAM+LDGI+FEGAPVKVRRP+DYN
Sbjct: 240 AIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYN 299
Query: 979 PSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGA 1158
PSLAA+LGPS PSP+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE QVRELLESFG
Sbjct: 300 PSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGP 359
Query: 1159 LKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKP 1338
L+GFDLVKDRETGNSKGYAFCVYQ++ VTDIACAALNGIKMGDKTLTVRRAN GA QP+P
Sbjct: 360 LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRP 419
Query: 1339 EQESVLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGK 1518
EQES+L+ AQQQ+ Q + Q G + T VVCLTQVV+ DEL+DDEE+EDIMED+R E GK
Sbjct: 420 EQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLESGK 479
Query: 1519 FGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPED 1698
+G L VVIPRP P G PVAG+GKVFL+Y D DG+++A++ M+GR+FGGN VVAVFYPE+
Sbjct: 480 YGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPEN 539
Query: 1699 KFDQGDYGA 1725
KF +Y A
Sbjct: 540 KFASAEYDA 548
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 542
Score = 689 bits (1778), Expect = 4e-196
Identities = 367/463 (79%), Positives = 394/463 (85%), Gaps = 16/463 (3%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDRE-REKSGDKDSDR-RSRDRDVDRKSKERSRDRDGGHHRSSR 339
+S++ R+ R+ R +D E +S D+D ++ + R RD DR +ER R H SR
Sbjct: 50 RSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRER-HHRSSRHRDHSR 108
Query: 340 HRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPS 507
R R+R R DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPS
Sbjct: 109 ERGERRERGGR---DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165
Query: 508 KPK-RVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLP 675
K K RVSGFDMAPPASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLS 223
Query: 676 MMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 855
MMPIQAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN
Sbjct: 224 MMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 283
Query: 856 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLA 1035
HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLA
Sbjct: 284 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLA 343
Query: 1036 AVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYA 1215
AVGLTPGASGGLEGPDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYA
Sbjct: 344 AVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYA 403
Query: 1216 FCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNM 1395
FCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ M
Sbjct: 404 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVM 463
Query: 1396 LQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFG 1524
LQPG VAT VVCLTQVV EDELRDDEE+ DIMED+RQEGGKFG
Sbjct: 464 LQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFG 506
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 565
Score = 687 bits (1772), Expect = 2e-195
Identities = 366/462 (79%), Positives = 393/462 (85%), Gaps = 16/462 (3%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDRE-REKSGDKDSDR-RSRDRDVDRKSKERSRDRDGGHHRSSR 339
+S++ R+ R+ R +D E +S D+D ++ + R RD DR +ER R H SR
Sbjct: 50 RSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRER-HHRSSRHRDHSR 108
Query: 340 HRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPS 507
R R+R R DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPS
Sbjct: 109 ERGERRERGGR---DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165
Query: 508 KPK-RVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLP 675
K K RVSGFDMAPPASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLS 223
Query: 676 MMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 855
MMPIQAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN
Sbjct: 224 MMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 283
Query: 856 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLA 1035
HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLA
Sbjct: 284 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLA 343
Query: 1036 AVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYA 1215
AVGLTPGASGGLEGPDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYA
Sbjct: 344 AVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYA 403
Query: 1216 FCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNM 1395
FCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ M
Sbjct: 404 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVM 463
Query: 1396 LQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKF 1521
LQPG VAT VVCLTQVV EDELRDDEE+ DIMED+RQEGGKF
Sbjct: 464 LQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKF 505
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 686 bits (1769), Expect = 4e-195
Identities = 365/462 (79%), Positives = 393/462 (85%), Gaps = 16/462 (3%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKDRE-REKSGDKDSDR-RSRDRDVDRKSKERSRDRDGGHHRSSR 339
+S++ R+ R+ R +D E +S D+D ++ + R RD DR +ER R H SR
Sbjct: 50 RSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRDHRER-HHRSSRHRDRSR 108
Query: 340 HRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPS 507
R R+R R DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPS
Sbjct: 109 ERGERRERGGR---DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165
Query: 508 KPK-RVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLP 675
K K RVSGFDMAPPASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLS 223
Query: 676 MMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 855
MMPIQAMTQQATRHARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN
Sbjct: 224 MMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYIN 283
Query: 856 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLA 1035
HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLA
Sbjct: 284 HEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLA 343
Query: 1036 AVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYA 1215
AVGLTPGASGGLEGPDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYA
Sbjct: 344 AVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYA 403
Query: 1216 FCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNM 1395
FCVYQ+++VTDIACAALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ M
Sbjct: 404 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVM 463
Query: 1396 LQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKF 1521
LQPG VAT VVCLTQVV EDELRDDEE+ DIMED+RQEGG+F
Sbjct: 464 LQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGRF 505
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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