Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN12921


BLASTX 7.6.2

Query= UN12921 /QuerySize=1277
        (1276 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|O94317|YH5D_SCHPO Uncharacterized serine-rich protein C215.13...     54   2e-006
sp|Q54PH5|CWC2_DICDI Pre-mRNA-splicing factor cwc2 OS=Dictyostel...     52   6e-006

>sp|O94317|YH5D_SCHPO Uncharacterized serine-rich protein C215.13
        OS=Schizosaccharomyces pombe GN=SPBC215.13 PE=1 SV=1

          Length = 534

 Score =  54 bits (129), Expect = 2e-006
 Identities = 70/193 (36%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
 Frame = -3

Query: 962 SSSSLNFSFSFGLL*RL*TRTMRGLISLNTASSHSAVVRSLIGRM*LSSC---QTVSSSL 792
           SS+S+  S S   L      T     SL++++S S    S       SS     T SS L
Sbjct: 151 SSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYL 210

Query: 791 SSSSSSSSSSFFSFLIVILLKKTG*S*TPSPSASSGQSGSSSLTTRG*SARSFCIFLLFS 612
           SSSS  SSSS  S      L  +  S +  PS SS  S +SS  +   S+ +       S
Sbjct: 211 SSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSS 270

Query: 611 TMSISSSSSTSGWLSITSRIFFLHSHLSSGSSRVADLFSEVSFFTSSSSSSSSSSSLSLS 432
           ++  SSSSS+S   S +S I    S  SS SS      S +S  +SSSSSSS SS+LS S
Sbjct: 271 SIISSSSSSSSSPTSTSSTI----SSSSSSSSSPTSTSSTIS--SSSSSSSSFSSTLSSS 324

Query: 431 SFFLHDFFPSLST 393
           S      F S  T
Sbjct: 325 SMSSSSSFSSSPT 337

>sp|Q54PH5|CWC2_DICDI Pre-mRNA-splicing factor cwc2 OS=Dictyostelium discoideum
        GN=cwc2 PE=3 SV=1

          Length = 528

 Score =  52 bits (124), Expect = 6e-006
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
 Frame = +1

Query: 430 EESDSDDDDDDDDEDEVKKDTSEKRSATLDDPEERWEWRKKIREVIDSHPDVEEEEEIDM 609
           EE D DD+DDDDD ++   D  E +    D  E + E  K+++E I++    E +E+   
Sbjct: 451 EEEDDDDEDDDDDNEDDDNDNEETKDNKNDKVENKEEENKEVQEKINT----ESKEDTKN 506

Query: 610 VEKRRKMQKLLADYPLVVNEED 675
            E+ +K +K   D   +VN+ED
Sbjct: 507 EEQEKKEEKEKTDSDNIVNKED 528

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,796,540,212
Number of Sequences: 518415
Number of Extensions: 51796540212
Number of Successful Extensions: 358348623
Number of sequences better than 0.0: 0