BLASTX 7.6.2
Query= UN12969 /QuerySize=1051
(1050 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 395 4e-110
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 249 3e-066
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 246 3e-065
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 234 8e-062
TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (... 55 5e-008
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 54 1e-007
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 53 3e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 49 4e-006
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 395 bits (1013), Expect = 4e-110
Identities = 200/223 (89%), Positives = 210/223 (94%), Gaps = 5/223 (2%)
Frame = -2
Query: 980 MTLNDEQEHEVYGGEIP-EEEGEMETDEYEEHVGEEEGAAAGGGDEELEPGSSSKDLEGM 804
M ++DEQEHEVYGGEIP EEEGEM+T+EYEEH G EEGAAA GDEELEPGSSS+DLE M
Sbjct: 1 MPVHDEQEHEVYGGEIPEEEEGEMDTEEYEEH-GGEEGAAA--GDEELEPGSSSRDLEDM 57
Query: 803 KKRIKEIEEEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPE 624
KKRIKEIEEEAGALREMQAKAEK+MGA QDPSG +S+AEKEEVDSRSIYVGNVDYACTPE
Sbjct: 58 KKRIKEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPE 117
Query: 623 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAK 444
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNSLILNESELHGRQIKVSAK
Sbjct: 118 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAK 177
Query: 443 RTNVPGMRQFRGR-RPFRPMRGFMPGIPFYAPYGYGRVPRFRR 318
RTNVPGMRQFRGR RPFRPMRGFMPG+PFY PY YGRVPRFRR
Sbjct: 178 RTNVPGMRQFRGRGRPFRPMRGFMPGVPFYPPYAYGRVPRFRR 220
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 249 bits (634), Expect = 3e-066
Identities = 135/212 (63%), Positives = 158/212 (74%), Gaps = 10/212 (4%)
Frame = -2
Query: 929 EEEGEMETDEYEEHVGEEEG---AAAGGGDEELEPGSSSKDLEGMKKRIKEIEEEAGALR 759
EEE E+ E + VGE +G A D + K+L+ MKKR+KE+E+EA ALR
Sbjct: 3 EEEHEVYGGEIPD-VGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALR 61
Query: 758 EMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 579
EMQAK EKEMGA S A + A KEEVD+RS++VGNVDYACTPEEVQQHFQ+CGTV+RV
Sbjct: 62 EMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRV 121
Query: 578 TILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRRP 399
TILTDKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KV KRTNVPG++QFRGRR
Sbjct: 122 TILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR- 180
Query: 398 FRPMRGFMPGIPF-----YAPYGYGRVPRFRR 318
F P G+ PF Y+PYGYG+ PRFRR
Sbjct: 181 FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRR 212
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 246 bits (626), Expect = 3e-065
Identities = 132/210 (62%), Positives = 159/210 (75%), Gaps = 12/210 (5%)
Frame = -2
Query: 914 METDEYEEHVGE-EEGAAAGGGDEELEPGSSSKD----LEGMKKRIKEIEEEAGALREMQ 750
ME +E+E + GE E D +++ ++ +D L MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 749 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 573
AK EKEMGA QDP+ ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 572 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRRPFR 393
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 392 PMRGF---MPGIP--FYAPYGYGRVPRFRR 318
P G+ P +P FY+PYGYG+ PRFRR
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYGKAPRFRR 209
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 234 bits (596), Expect = 8e-062
Identities = 127/203 (62%), Positives = 153/203 (75%), Gaps = 12/203 (5%)
Frame = -2
Query: 914 METDEYEEHVGE-EEGAAAGGGDEELEPGSSSKD----LEGMKKRIKEIEEEAGALREMQ 750
ME +E+E + GE E D +++ ++ +D L MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 749 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 573
AK EKEMGA QDP+ ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 572 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRRPFR 393
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 392 PMRGF---MPGIP--FYAPYGYG 339
P G+ P +P FY+PYGYG
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:7342869-7347052 REVERSE
Length = 562
Score = 55 bits (132), Expect = 5e-008
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 671 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLI 492
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F + +N+L
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 491 LN-ESELHGRQIKVSA--KRTNVP 429
LN + E+ GR IKVSA +T VP
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 54 bits (129), Expect = 1e-007
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -2
Query: 743 AEKEMGADQDPSGAISSAEKEEVD-SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 567
AEKE AD++ S + E + + R ++V N+ ++ + ++ + F CGTVN V I+
Sbjct: 69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128
Query: 566 DKFGQPKGFAYVEFVEEDAVQNSL-ILNESELHGRQIKVSAKR 441
K G+ +GFA+V + Q ++ + ++ GR I VS R
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFAR 171
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 53 bits (126), Expect = 3e-007
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Frame = -2
Query: 779 EEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRS------IYVGNVDYACTPEEV 618
E + A E+QA E+E +++ E+E+ +++ +YVGN+ Y T E+
Sbjct: 73 EASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSEL 132
Query: 617 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE-EDAVQNSLILNESELHGRQIKVS 450
Q F GTV V I+ DK + +GF +V E+A + + N S++ GR +KV+
Sbjct: 133 SQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVN 190
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 49 bits (116), Expect = 4e-006
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = -2
Query: 677 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQN 501
+ S I+VG + Y+ +++ F G V I+ D+ G+ +GFA+V F + N
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 500 SLILNESELHGRQIKV--SAKRTNVPGMRQFRG 408
++ L+ +LHGR+I+V + +R + G R F G
Sbjct: 91 AMQLDGQDLHGRRIRVNYATERGSGFGGRGFGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,848,706,077
Number of Sequences: 33410
Number of Extensions: 6848706077
Number of Successful Extensions: 232626689
Number of sequences better than 0.0: 0
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