BLASTX 7.6.2
Query= UN13047 /QuerySize=1043
(1042 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding ... 544 2e-152
gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Bras... 536 3e-150
gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [... 533 2e-149
gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3... 532 6e-149
gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b b... 529 4e-148
gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arab... 528 5e-148
gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding pro... 527 2e-147
gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorop... 525 4e-147
gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT... 524 1e-146
gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT... 524 1e-146
gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorop... 519 4e-145
gi|21592428|gb|AAM64379.1| putative photosystem II type I chloro... 517 1e-144
gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subs... 514 1e-143
gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding pro... 502 7e-140
gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein... 497 2e-138
gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB... 490 2e-136
gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHC... 486 4e-135
gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding prot... 482 6e-134
gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cice... 473 3e-131
gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP A... 473 3e-131
>gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding protein
[Brassica napus]
Length = 267
Score = 544 bits (1399), Expect = 2e-152
Identities = 265/267 (99%), Positives = 266/267 (99%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNREL+VIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELQVIHCRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFAQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK 871
LENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
Length = 273
Score = 536 bits (1379), Expect = 3e-150
Identities = 263/271 (97%), Positives = 264/271 (97%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGEPPSYLTG+FPGDYGWDTAGLSA PETF RNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGEPPSYLTGQFPGDYGWDTAGLSAVPETFVRNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV GD
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVPGD 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDP AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPVAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK*AKF 883
LENLADHLADPVNNNAWAFATNFVPGK F
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGKSTMF 271
>gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [Arabidopsis
thaliana]
Length = 267
Score = 533 bits (1373), Expect = 2e-149
Identities = 260/267 (97%), Positives = 265/267 (99%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK 871
+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3 [Arabidopsis
thaliana]
Length = 267
Score = 532 bits (1368), Expect = 6e-149
Identities = 259/267 (97%), Positives = 264/267 (98%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAV LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK 871
+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein
1, chloroplastic; AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
Length = 266
Score = 529 bits (1361), Expect = 4e-148
Identities = 259/266 (97%), Positives = 262/266 (98%), Gaps = 1/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AASTMALSSPAFAGKAVKLSP ASEV G+GRVTMRKTV KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK 871
ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis
thaliana]
Length = 267
Score = 528 bits (1360), Expect = 5e-148
Identities = 258/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAV LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 EPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK 871
+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica
oleracea]
Length = 266
Score = 527 bits (1356), Expect = 2e-147
Identities = 258/266 (96%), Positives = 261/266 (98%), Gaps = 1/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AASTMALSSPAFAGKAVKLSP ASEV G+GRVTMRKTV KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTV-KPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLAADPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK 871
ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorophyll a/b
binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 525 bits (1352), Expect = 4e-147
Identities = 257/265 (96%), Positives = 262/265 (98%), Gaps = 2/265 (0%)
Frame = +2
Query: 77 ASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPF 256
+STMALSSPAFAGKAVK PAAS+VLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLGPF
Sbjct: 3 SSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPF 60
Query: 257 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 436
SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARN 120
Query: 437 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP 616
GVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP
Sbjct: 121 GVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP 180
Query: 617 LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 796
LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 797 NLADHLADPVNNNAWAFATNFVPGK 871
NLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265
>gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204
[Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 524 bits (1349), Expect = 1e-146
Identities = 254/262 (96%), Positives = 259/262 (98%)
Frame = +2
Query: 86 MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGE 265
MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKT AKPKGPSGSPWYGS+RVKYLGPFSGE
Sbjct: 1 MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTTAKPKGPSGSPWYGSDRVKYLGPFSGE 60
Query: 266 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVK 445
PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 120
Query: 446 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGE 625
FGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+GPLGE
Sbjct: 121 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 180
Query: 626 AEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 805
AEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 181 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 240
Query: 806 DHLADPVNNNAWAFATNFVPGK 871
DHLADPV NNAWAFATNFVPGK
Sbjct: 241 DHLADPVTNNAWAFATNFVPGK 262
>gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203
[Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 524 bits (1348), Expect = 1e-146
Identities = 254/262 (96%), Positives = 259/262 (98%)
Frame = +2
Query: 86 MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGE 265
MALSSPAFAGKAV LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLGPFSGE
Sbjct: 1 MALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 60
Query: 266 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVK 445
PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 120
Query: 446 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGE 625
FGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+GPLGE
Sbjct: 121 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 180
Query: 626 AEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 805
AEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 181 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 240
Query: 806 DHLADPVNNNAWAFATNFVPGK 871
DHLADPV NNAWAFATNFVPGK
Sbjct: 241 DHLADPVTNNAWAFATNFVPGK 262
>gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorophyll a/b
binding protein 1 [Arabidopsis thaliana]
Length = 266
Score = 519 bits (1335), Expect = 4e-145
Identities = 253/266 (95%), Positives = 259/266 (97%), Gaps = 1/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AASTMALSSPA GKAVKLSPAASEV G+GR+TMRK +KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK 871
ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|21592428|gb|AAM64379.1| putative photosystem II type I chlorophyll a b
binding protein [Arabidopsis thaliana]
Length = 266
Score = 517 bits (1331), Expect = 1e-144
Identities = 252/266 (94%), Positives = 259/266 (97%), Gaps = 1/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AASTMALSSPA GKAVKLSPAASEV G+GR+TMRK +KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGV+FGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG
Sbjct: 121 NGVEFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK 871
ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 514 bits (1323), Expect = 1e-143
Identities = 251/266 (94%), Positives = 259/266 (97%), Gaps = 1/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AA+TMAL SPA AGKAVKLSPAASEV G+GRVTMRK +KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AATTMALYSPALAGKAVKLSPAASEVFGTGRVTMRK-ASKPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK 871
ENL+DHLADPVNNNAWAFATNFVPGK
Sbjct: 241 ENLSDHLADPVNNNAWAFATNFVPGK 266
>gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding protein 2
precursor, 5' partial; 1-750 [Arabidopsis thaliana]
Length = 249
Score = 502 bits (1290), Expect = 7e-140
Identities = 242/249 (97%), Positives = 247/249 (99%)
Frame = +2
Query: 125 KLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDY 304
KLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLGPFSGE PSYLTGEFPGDY
Sbjct: 1 KLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDY 60
Query: 305 GWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 484
GWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI
Sbjct: 61 GWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 120
Query: 485 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDP 664
FS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+GPLGEAEDLLYPGGSFDP
Sbjct: 121 FSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDP 180
Query: 665 LGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 844
LGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA
Sbjct: 181 LGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWA 240
Query: 845 FATNFVPGK 871
FATNFVPGK
Sbjct: 241 FATNFVPGK 249
>gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein 2 precursor
[Arabidopsis lyrata subsp. lyrata]
Length = 245
Score = 497 bits (1277), Expect = 2e-138
Identities = 239/245 (97%), Positives = 244/245 (99%)
Frame = +2
Query: 137 AASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDT 316
AAS+VLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLGPFSGEPPSYLTGEFPGDYGWDT
Sbjct: 1 AASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 60
Query: 317 AGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 496
AGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFS+G
Sbjct: 61 AGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDG 120
Query: 497 GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLA 676
GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+GPLGEAEDLLYPGGSFDPLGLA
Sbjct: 121 GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLA 180
Query: 677 TDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 856
TDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN
Sbjct: 181 TDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 240
Query: 857 FVPGK 871
FVPGK
Sbjct: 241 FVPGK 245
>gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative
[Musa acuminata]
Length = 265
Score = 490 bits (1261), Expect = 2e-136
Identities = 238/264 (90%), Positives = 248/264 (93%), Gaps = 1/264 (0%)
Frame = +2
Query: 77 ASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPF 256
A+TMALSSP+FAGKAVKL+P+AS VLG GRVTMRK KP SGSPWYG +RVKYLGP
Sbjct: 2 AATMALSSPSFAGKAVKLAPSASGVLGQGRVTMRKAGGKPAASSGSPWYGPDRVKYLGPL 61
Query: 257 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 436
SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 62 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121
Query: 437 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP 616
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVILMGAVEGYR+AG GP
Sbjct: 122 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG-GP 180
Query: 617 LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 796
LGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 797 NLADHLADPVNNNAWAFATNFVPG 868
NLADHLADPVNNNAWA+ATNFVPG
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPG 264
>gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I
precursor [Panax ginseng]
Length = 266
Score = 486 bits (1249), Expect = 4e-135
Identities = 237/266 (89%), Positives = 250/266 (93%), Gaps = 1/266 (0%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSP+FAG AVK++P++SE+ GSGR++MRKT KP SGSPWYG +RVKYLG
Sbjct: 1 MAASTMALSSPSFAGMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG- 179
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 791 LENLADHLADPVNNNAWAFATNFVPG 868
LENLAD LADPVNNNAWA+ATNFVPG
Sbjct: 240 LENLADPLADPVNNNAWAYATNFVPG 265
>gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor
[Euphorbia esula]
Length = 268
Score = 482 bits (1239), Expect = 6e-134
Identities = 234/266 (87%), Positives = 250/266 (93%), Gaps = 2/266 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSP-AASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
A+S+MALSSP+FAG+AVKLSP +ASE++G+GRV+MRK K PSGSPWYG +RVKYLG
Sbjct: 3 ASSSMALSSPSFAGQAVKLSPSSASELMGNGRVSMRKAATKKVAPSGSPWYGPDRVKYLG 62
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 63 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 122
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 181
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGE D +YPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
Query: 791 LENLADHLADPVNNNAWAFATNFVPG 868
LENLADHL DPVNNNAWAFATNFVPG
Sbjct: 242 LENLADHLFDPVNNNAWAFATNFVPG 267
>gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
Length = 266
Score = 473 bits (1215), Expect = 3e-131
Identities = 233/267 (87%), Positives = 246/267 (92%), Gaps = 3/267 (1%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSERVKYL 247
MAAS+MALSSP AGK VKLSP++ E LG+ R TMRK+ K SGSPWYG +RVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLSPSSQE-LGASRFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 248 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 427
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 428 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 607
+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYR+AG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAG 179
Query: 608 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 787
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 -GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 238
Query: 788 PLENLADHLADPVNNNAWAFATNFVPG 868
PLENLADHL+DPVNNNAWA+ATNFVPG
Sbjct: 239 PLENLADHLSDPVNNNAWAYATNFVPG 265
>gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180)
[Arabidopsis thaliana]
Length = 233
Score = 473 bits (1215), Expect = 3e-131
Identities = 226/233 (96%), Positives = 231/233 (99%)
Frame = +2
Query: 173 MRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 352
MRKTVAKPKGPSGSPWYGS+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAR
Sbjct: 1 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 60
Query: 353 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 532
NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVH
Sbjct: 61 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 120
Query: 533 AQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 712
AQSILAIWATQVILMGAVEGYRVAG+GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK
Sbjct: 121 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 180
Query: 713 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 871
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 233
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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