BLASTX 7.6.2
Query= UN13047 /QuerySize=1043
(1042 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 534 5e-152
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 532 2e-151
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 532 2e-151
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 526 1e-149
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 519 1e-147
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 413 1e-115
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 408 5e-114
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 405 3e-113
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 342 3e-094
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 200 2e-051
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 194 9e-050
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 143 3e-034
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 136 3e-032
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 136 3e-032
TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; ch... 119 4e-027
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 111 1e-024
TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light h... 109 5e-024
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 91 8e-019
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 91 8e-019
TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light h... 76 3e-014
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 534 bits (1374), Expect = 5e-152
Identities = 260/268 (97%), Positives = 265/268 (98%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK* 874
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 532 bits (1369), Expect = 2e-151
Identities = 259/268 (96%), Positives = 264/268 (98%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAV LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK* 874
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 532 bits (1369), Expect = 2e-151
Identities = 259/268 (96%), Positives = 264/268 (98%)
Frame = +2
Query: 71 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 250
MAASTMALSSPAFAGKAV LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 251 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA 430
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 431 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 610
RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 611 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 790
GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 791 LENLADHLADPVNNNAWAFATNFVPGK* 874
+ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 526 bits (1353), Expect = 1e-149
Identities = 257/266 (96%), Positives = 262/266 (98%), Gaps = 2/266 (0%)
Frame = +2
Query: 77 ASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPF 256
+STMALSSPAFAGKAVK PAAS+VLGSGRVTMRKTVAKPKGPSGSPWYGS+RVKYLGPF
Sbjct: 3 SSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPF 60
Query: 257 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 436
SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARN 120
Query: 437 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP 616
GVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP
Sbjct: 121 GVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGP 180
Query: 617 LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 796
LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 797 NLADHLADPVNNNAWAFATNFVPGK* 874
NLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK* 266
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 519 bits (1336), Expect = 1e-147
Identities = 253/267 (94%), Positives = 259/267 (97%), Gaps = 1/267 (0%)
Frame = +2
Query: 74 AASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGP 253
AASTMALSSPA GKAVKLSPAASEV G+GR+TMRK +KP GPSGSPWYGS+RVKYLGP
Sbjct: 2 AASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTGPSGSPWYGSDRVKYLGP 60
Query: 254 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 433
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 434 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 613
NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 614 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 793
PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 794 ENLADHLADPVNNNAWAFATNFVPGK* 874
ENLADHLADPVNNNAWAFATNFVPGK*
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK* 267
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 413 bits (1060), Expect = 1e-115
Identities = 203/270 (75%), Positives = 227/270 (84%), Gaps = 10/270 (3%)
Frame = +2
Query: 80 STMALSSPAFAGKAVKLSPAAS-----EVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKY 244
+T A+ +FAG+ L P++ VLG GRVTMR+TV K S WYG +R KY
Sbjct: 2 ATSAIQQSSFAGQTA-LKPSSDLIQKVGVLGGGRVTMRRTV---KSTPQSIWYGPDRPKY 57
Query: 245 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEL 424
LGPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+
Sbjct: 58 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 117
Query: 425 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 604
L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIG 177
Query: 605 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 784
G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 G-GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 785 GPLENLADHLADPVNNNAWAFATNFVPGK* 874
GP+ENL DHLADPV NNAW++ATNFVPGK*
Sbjct: 237 GPIENLFDHLADPVANNAWSYATNFVPGK* 266
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 408 bits (1046), Expect = 5e-114
Identities = 201/270 (74%), Positives = 224/270 (82%), Gaps = 10/270 (3%)
Frame = +2
Query: 80 STMALSSPAFAGKAVKLSPAAS-----EVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKY 244
+T A+ +FAG+ L P+ V G GRVTMR+TV K S WYG +R KY
Sbjct: 2 ATSAIQQSSFAGQTA-LKPSNELLRKVGVSGGGRVTMRRTV---KSTPQSIWYGPDRPKY 57
Query: 245 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEL 424
LGPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+
Sbjct: 58 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 117
Query: 425 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 604
L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIG 177
Query: 605 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 784
G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 G-GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 785 GPLENLADHLADPVNNNAWAFATNFVPGK* 874
GP+ENL DHLADPV NNAW++ATNFVPG *
Sbjct: 237 GPIENLFDHLADPVANNAWSYATNFVPGN* 266
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 405 bits (1039), Expect = 3e-113
Identities = 200/272 (73%), Positives = 227/272 (83%), Gaps = 13/272 (4%)
Frame = +2
Query: 80 STMALSSPAFAGKAVKLSPAASEVL-------GSGRVTMRKTVAKPKGPSGSPWYGSERV 238
+T A+ +FAG+ L P ++++L G GR+ MR+TV K S WYG +R
Sbjct: 2 ATSAIQHSSFAGQTT-LKP-SNDLLRKIGASNGGGRIIMRRTV---KSTPQSIWYGPDRP 56
Query: 239 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 418
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 419 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 598
E+L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYR 176
Query: 599 VAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 778
+ G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 177 IGG-GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 235
Query: 779 GKGPLENLADHLADPVNNNAWAFATNFVPGK* 874
GKGP+ENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 236 GKGPIENLFDHIADPVANNAWAYATNFVPGK* 267
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 342 bits (876), Expect = 3e-094
Identities = 174/232 (75%), Positives = 189/232 (81%), Gaps = 4/232 (1%)
Frame = +2
Query: 182 TVAKPKGPSGSP-WYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNR 358
++ PK G+ WYG +RVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR
Sbjct: 34 SLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNR 93
Query: 359 ELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 535
LEVIH RWAMLGA GC+ PE+L + V F E VWFKAGSQIFSEGGLDYLGNP+LVHA
Sbjct: 94 ALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHA 153
Query: 536 QSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVK 712
QSILA+ QVILMG VEG+R+ G +GE D LYPGG FDPLGLA DP FAELKVK
Sbjct: 154 QSILAVLGFQVILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVK 212
Query: 713 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 868
EIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAWAFAT F PG
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 200 bits (506), Expect = 2e-051
Identities = 109/210 (51%), Positives = 134/210 (63%), Gaps = 10/210 (4%)
Frame = +2
Query: 218 WYGSERVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 388
WYG +R +L E P YL GE GDYG+D GL PE FA+ + E+IH RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 389 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQ 565
MLGA G + PE L + G G EAVWFK G+ + L+Y G + +LA+ A +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 178
Query: 566 VILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFS 745
V+L+G E YR+ + ED L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+
Sbjct: 179 VVLLGGAEYYRITNG---LDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFA 235
Query: 746 MFGFFVQAIVTGKGPLENLADHLADPVNNN 835
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 236 MLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 194 bits (492), Expect = 9e-050
Identities = 106/217 (48%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Frame = +2
Query: 212 SPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 391
S WYG ER ++ GP + P YLTGE PGDYG+D AGL D TF + E++H RWAM
Sbjct: 104 SKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAM 163
Query: 392 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSL--VHAQSILAIWAT 562
L ALG + PE+ G F E VW++ G L+YLG P L +Q ++ I
Sbjct: 164 LAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAIC 223
Query: 563 QVILMGAVEGYRVAGD---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKN 724
QV+LM E R G PLG D+ YPGG+ FDPL L+ DP AF +LKVKEIKN
Sbjct: 224 QVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKN 283
Query: 725 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 835
GRLAM + GF+ QA TGKGP++NL DH++DP++NN
Sbjct: 284 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNN 320
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 143 bits (358), Expect = 3e-034
Identities = 96/264 (36%), Positives = 133/264 (50%), Gaps = 30/264 (11%)
Frame = +2
Query: 89 ALSSPAF-AGKAVKLSPAAS-EVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSG 262
A+SSP+F GK ++L + + ++R A P P P
Sbjct: 13 AISSPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFP-------------GS 59
Query: 263 EPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGV 442
PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA G PE L + G+
Sbjct: 60 TPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGI 119
Query: 443 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRVAG 607
W+ AG Q + + +L + IL WA +I G+V V
Sbjct: 120 -LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFP 172
Query: 608 DGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 781
+ L D+ YPGG FDPLG + P EL+ KEIKNGRLAM ++ G + Q I TG
Sbjct: 173 NNKL-TGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTG 231
Query: 782 KGPLENLADHLADPVNNNAWAFAT 853
GP++NL HLADP + +A T
Sbjct: 232 TGPIDNLFAHLADPGHATIFAAFT 255
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 136 bits (341), Expect = 3e-032
Identities = 88/230 (38%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Frame = +2
Query: 158 SGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 337
S +T R + K G +P ER +L + PP YL G GDYG+D GL DP
Sbjct: 21 SSVITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDP 78
Query: 338 ETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 517
E+ + E++H R+AMLG G +F +LL G++ VW++AG+ F D+
Sbjct: 79 ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFAST 132
Query: 518 PSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLG-------EAEDLLYPGGS-FDPLGL 673
+L+ Q +L +A M V A +G E + YPGG +PLGL
Sbjct: 133 KTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGL 192
Query: 674 ATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 823
A D + + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 193 AKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 136 bits (341), Expect = 3e-032
Identities = 88/230 (38%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Frame = +2
Query: 158 SGRVTMRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 337
S +T R + K G +P ER +L + PP YL G GDYG+D GL DP
Sbjct: 21 SSVITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDP 78
Query: 338 ETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 517
E+ + E++H R+AMLG G +F +LL G++ VW++AG+ F D+
Sbjct: 79 ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFAST 132
Query: 518 PSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLG-------EAEDLLYPGGS-FDPLGL 673
+L+ Q +L +A M V A +G E + YPGG +PLGL
Sbjct: 133 KTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGL 192
Query: 674 ATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 823
A D + + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 193 AKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; chlorophyll
binding | chr1:6612806-6613799 FORWARD
Length = 271
Score = 119 bits (297), Expect = 4e-027
Identities = 87/277 (31%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Frame = +2
Query: 80 STMALSSPAFAGKAVKLSPAASEVLGSGRVTMRK-----------TVAKPKGPSGSPWYG 226
ST+ LS+ + AS GR+ + +V +P P W+
Sbjct: 11 STLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLWFP 70
Query: 227 SERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALG 406
PP +L G PGD+G+D GL +DP+T + E+IH RWAML G
Sbjct: 71 ----------GSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120
Query: 407 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVI 571
+ PE L R G W+ AGS+ + + + +L AQ +L WA +I
Sbjct: 121 IIIPECLERLGF-IENFSWYDAGSREY------FADSTTLFVAQMVLMGWAEGRRWADLI 173
Query: 572 LMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGL--ATDPEAFAELKVKEIKNGRLAMFS 745
G+V+ + D+ YPGG + + PE L+ KEIKNGRLAM +
Sbjct: 174 KPGSVD-IEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLA 232
Query: 746 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 856
GF QA T + P+ENL HLADP + N ++ T+
Sbjct: 233 FLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 111 bits (276), Expect = 1e-024
Identities = 74/161 (45%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Frame = +2
Query: 350 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 529
R RE E+IH RWAML LG + E L GV W AG +G YLG P
Sbjct: 135 RFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPF 186
Query: 530 HAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 706
++ IW +V+++G +E R A ++E LYPGG FDPLGLA DPE A+L+
Sbjct: 187 SISTL--IW-IEVLVIGYIEFQRNAE----LDSEKRLYPGGKFFDPLGLAADPEKTAQLQ 239
Query: 707 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 829
+ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++
Sbjct: 240 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 280
>TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light harvesting
complex PSII); chlorophyll binding | chr3:2717717-2718665 FORWARD
Length = 288
Score = 109 bits (270), Expect = 5e-024
Identities = 73/161 (45%), Positives = 93/161 (57%), Gaps = 16/161 (9%)
Frame = +2
Query: 350 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 529
R RE E+IH RWAML LG + E L GV W AG +G YLG P
Sbjct: 132 RFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPF 183
Query: 530 HAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 706
++ IW +V+++G +E R A ++E LYPGG FDPLGLA+DP A+L+
Sbjct: 184 SISTL--IW-IEVLVIGYIEFQRNAE----LDSEKRLYPGGKFFDPLGLASDPVKKAQLQ 236
Query: 707 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 829
+ EIK+ RLAM GF VQA TGKGPL N A HL+DP++
Sbjct: 237 LAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLH 277
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 91 bits (225), Expect = 8e-019
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +2
Query: 641 YPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 817
YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DHLA
Sbjct: 200 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 259
Query: 818 DPVNNN 835
DPVNNN
Sbjct: 260 DPVNNN 265
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 91 bits (225), Expect = 8e-019
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +2
Query: 641 YPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 817
YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DHLA
Sbjct: 145 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 204
Query: 818 DPVNNN 835
DPVNNN
Sbjct: 205 DPVNNN 210
>TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light harvesting
complex PSII); chlorophyll binding | chr2:16745884-16747190 FORWARD
Length = 277
Score = 76 bits (186), Expect = 3e-014
Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Frame = +2
Query: 461 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLL 640
W AG EG YLG P ++ IW +V+++G +E R + P E +
Sbjct: 166 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNSELDP----EKRI 217
Query: 641 YPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 805
YPGG FDPLGLA DPE LK+ EIK+ RLAM + F +QA TGKGP+ LA
Sbjct: 218 YPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLA 272
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,892,857,482
Number of Sequences: 33410
Number of Extensions: 6892857482
Number of Successful Extensions: 235161182
Number of sequences better than 0.0: 0
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