BLASTX 7.6.2
Query= UN13116 /QuerySize=872
(871 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplasti... 354 5e-097
sp|P82403|RR6_SPIOL 30S ribosomal protein S6 alpha, chloroplasti... 252 4e-066
sp|Q8R6M1|RS6_THETN 30S ribosomal protein S6 OS=Thermoanaerobact... 52 6e-006
>sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplastic
OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1
Length = 207
Score = 354 bits (908), Expect = 5e-097
Identities = 182/210 (86%), Positives = 192/210 (91%), Gaps = 6/210 (2%)
Frame = -1
Query: 745 LASSLCLSNSPVCPHSLPNVSSQPLLSFSRSLRPFVSKSKPLASQQKKKKRESSVVVKSQ 566
+ASSLC+SNS +CP LPNVSSQPLLSFS SLRPF+SKSKP+ + +K+ S VVKSQ
Sbjct: 1 MASSLCVSNSTICP--LPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRD-GSQFVVKSQ 57
Query: 565 ALDFSGTFFEGGFGSDDD---PSPSSVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDE 395
ALDFSGTFFEGGFGSDDD PS S VSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDE
Sbjct: 58 ALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDE 117
Query: 394 RLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKP 215
RLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKP
Sbjct: 118 RLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKP 177
Query: 214 ESITPLESVLTADDDVIRSSSFKIKKRKYN 125
ESI PLE+VLTADDD+IRSSSFKIKKRKYN
Sbjct: 178 ESIVPLETVLTADDDIIRSSSFKIKKRKYN 207
>sp|P82403|RR6_SPIOL 30S ribosomal protein S6 alpha, chloroplastic (Fragment)
OS=Spinacia oleracea GN=RPS6 PE=1 SV=2
Length = 168
Score = 252 bits (641), Expect = 4e-066
Identities = 124/152 (81%), Positives = 135/152 (88%), Gaps = 2/152 (1%)
Frame = -1
Query: 577 VKSQALDFSGTFFEGGFG--SDDDPSPSSVSTALEDKPEPQCPPGLRQYETMAVLRPDMS 404
VK+ ALDFSG+FFEGGFG +D PS A+E+KPEPQCPPGLRQYETMAVLRPDM+
Sbjct: 17 VKAIALDFSGSFFEGGFGGLDEDPPSTPPAGLAVEEKPEPQCPPGLRQYETMAVLRPDMT 76
Query: 403 EDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYF 224
EDERL LTQKYEELLVAGG MYVEVFNRGVIPLAYSI++KNKAGETN YLDGIYLLFTYF
Sbjct: 77 EDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTYF 136
Query: 223 TKPESITPLESVLTADDDVIRSSSFKIKKRKY 128
TKPESI+PLE+ L DDDVIRSSSFKI+KRKY
Sbjct: 137 TKPESISPLEAALVTDDDVIRSSSFKIRKRKY 168
>sp|Q8R6M1|RS6_THETN 30S ribosomal protein S6 OS=Thermoanaerobacter
tengcongensis GN=rpsF PE=3 SV=1
Length = 95
Score = 52 bits (122), Expect = 6e-006
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -1
Query: 448 LRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNK 278
+R YETM VL PD++E+ER GL ++++ L+V GG G LAY I+KK++
Sbjct: 1 MRSYETMYVLSPDLNEEERKGLIERFKNLIVERGGEITNFDEWGKRKLAYPIQKKSE 57
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0
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