BLASTX 7.6.2
Query= UN13130 /QuerySize=974
(973 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99MM4|TRAD1_RAT TRAF-type zinc finger domain-containing prot... 107 1e-022
sp|Q3UDK1|TRAD1_MOUSE TRAF-type zinc finger domain-containing pr... 107 2e-022
sp|Q4R970|TRAD1_MACFA TRAF-type zinc finger domain-containing pr... 106 3e-022
sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing pr... 104 1e-021
sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing pr... 104 1e-021
sp|Q58DH1|XAF1_BOVIN XIAP-associated factor 1 OS=Bos taurus GN=X... 97 1e-019
sp|Q6GPH4|XAF1_HUMAN XIAP-associated factor 1 OS=Homo sapiens GN... 97 1e-019
sp|P39429|TRAF2_MOUSE TNF receptor-associated factor 2 OS=Mus mu... 52 4e-006
sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus mu... 52 6e-006
>sp|Q99MM4|TRAD1_RAT TRAF-type zinc finger domain-containing protein 1 OS=Rattus
norvegicus GN=Trafd1 PE=2 SV=2
Length = 576
Score = 107 bits (266), Expect = 1e-022
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
+C++C ++IP N +H +HC RN+ C +C + PK H + H V C C + +
Sbjct: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTCK-CNKKL 70
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLRETYN 568
++ H E CP R+ C+ C+ L V L EH++ CG RTELC C V ++E
Sbjct: 71 EKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQT 130
Query: 569 HETKC 583
H C
Sbjct: 131 HPAVC 135
>sp|Q3UDK1|TRAD1_MOUSE TRAF-type zinc finger domain-containing protein 1 OS=Mus
musculus GN=Trafd1 PE=1 SV=1
Length = 580
Score = 107 bits (265), Expect = 2e-022
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 197 EISIVCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMC 376
+ S +C++C ++IP N +H +HC RN+ C +C + PK H + H V C C
Sbjct: 8 QASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTCK-C 66
Query: 377 KETIDREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLR 556
+ +++ H E CP R+ C+ C+ L V L EH++ CG RTELC C V ++
Sbjct: 67 NKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVK 126
Query: 557 ETYNHETKC 583
E H C
Sbjct: 127 ELKTHPEVC 135
>sp|Q4R970|TRAD1_MACFA TRAF-type zinc finger domain-containing protein 1
OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1
Length = 582
Score = 106 bits (264), Expect = 3e-022
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
+C++C ++IP N +H +HC RN+ C IC + PK + H + H V C C + +
Sbjct: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTCK-CNKKL 70
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLRETYN 568
++ + H E CP R+ C+ C+ L + L EH++ CG RTELC C V +++
Sbjct: 71 EKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKT 130
Query: 569 HETKC 583
H C
Sbjct: 131 HPEVC 135
>sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo
sapiens GN=TRAFD1 PE=1 SV=1
Length = 582
Score = 104 bits (259), Expect = 1e-021
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
+C++C ++IP N +H +HC RN+ C C + PK + H + H V C C + +
Sbjct: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK-CNKKL 70
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLRETYN 568
++ + H E CP R+ C+ C+ L + L EH++ CG RTELC C V +++
Sbjct: 71 EKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKT 130
Query: 569 HETKC 583
H C
Sbjct: 131 HPEVC 135
>sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing protein 1 OS=Bos
taurus GN=TRAFD1 PE=2 SV=1
Length = 580
Score = 104 bits (258), Expect = 1e-021
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
+C++C ++IP N +H +HC RN+ C +C + PK + H + H V C C + +
Sbjct: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTCK-CNKKL 70
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLRETYN 568
++ H E CP R+ C+ C+ L + L +H++ CG RTELC C V +++
Sbjct: 71 EKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVLVKDLKT 130
Query: 569 HETKCPGSVLNNVESSRVPRA 631
H C +VE RV A
Sbjct: 131 HPEVCG----RDVEEKRVEAA 147
>sp|Q58DH1|XAF1_BOVIN XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2
Length = 297
Score = 97 bits (241), Expect = 1e-019
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
VC +C R + + ++ LH HC L C C + V + +EH H V C+MC++++
Sbjct: 7 VCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSV 66
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFP--LPAVDLPEHQEVCGNRTELCYQCNSYVRLRET 562
+ +SH + C +R V C+FC+ L VDL EH CG +TELC C +V LR
Sbjct: 67 PKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH--CGQQTELCPDCGQHVMLRVL 124
Query: 563 YNHETKCPGSVLNNVESSRVP 625
H +C L + +P
Sbjct: 125 ARHREECQREQLRLQKGKSIP 145
>sp|Q6GPH4|XAF1_HUMAN XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1
SV=1
Length = 301
Score = 97 bits (241), Expect = 1e-019
Identities = 42/125 (33%), Positives = 63/125 (50%)
Frame = +2
Query: 209 VCNHCDRDIPAPNIDLHRVHCARNLEKCKICGDMVPKKHAQEHFSNTHAPVPCSMCKETI 388
VC +C R + + N LH +C R L C C + VPK+ +EH H V C+MC++++
Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSM 66
Query: 389 DREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSYVRLRETYN 568
+ H C +R V C+FC+ + L H+ CG+RTELC C ++ R
Sbjct: 67 QKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQ 126
Query: 569 HETKC 583
H C
Sbjct: 127 HRDVC 131
>sp|P39429|TRAF2_MOUSE TNF receptor-associated factor 2 OS=Mus musculus GN=Traf2
PE=1 SV=1
Length = 501
Score = 52 bits (124), Expect = 4e-006
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 365 CSMCKETIDREVFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELCYQCNSY 544
C CK + HTE+ CPKR ++C+ C P VDL H EVC C C
Sbjct: 136 CPACKGLVRLSEKEHHTEQECPKRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKK 195
Query: 545 VRLRETY-NHETKC 583
RET+ +H C
Sbjct: 196 KIPRETFQDHVRAC 209
>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus musculus GN=Traf4
PE=2 SV=1
Length = 470
Score = 52 bits (123), Expect = 6e-006
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Frame = +2
Query: 236 PAPNIDLH----RVHCARNLEKCKICGDMVPKKHAQEHFSN-THAPVPC-SMCKETIDRE 397
P P +++ + C + E C+ G P +H Q H + + VPC + C + R
Sbjct: 68 PDPELEVQVLGLAIRCIHSEEGCRWSG---PLRHLQGHLNTCSFNVVPCPNRCPAKLSRR 124
Query: 398 VFNSHTEEICPKRMVTCEFCEFPLPAVDLPEHQEVCGNRTELC-YQCNSYVRLRETYNHE 574
+H + CPKR + CEFC H+ VC + C +C + + R H
Sbjct: 125 DLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGVCPQESVFCENKCGARMMRRLLAQHA 184
Query: 575 T-KCP 586
T +CP
Sbjct: 185 TSECP 189
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0
|
