BLASTX 7.6.2
Query= UN13138 /QuerySize=1173
(1172 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22328520|ref|NP_192643.2| RNA recognition motif-containing pr... 414 2e-113
gi|51969402|dbj|BAD43393.1| putative protein [Arabidopsis thaliana] 413 5e-113
gi|297808953|ref|XP_002872360.1| hypothetical protein ARALYDRAFT... 406 4e-111
gi|145332989|ref|NP_001078360.1| RNA recognition motif-containin... 382 7e-104
gi|7267547|emb|CAB78028.1| putative protein [Arabidopsis thaliana] 293 4e-077
gi|255645618|gb|ACU23303.1| unknown [Glycine max] 271 2e-070
gi|225459201|ref|XP_002285735.1| PREDICTED: hypothetical protein... 251 3e-064
gi|224082053|ref|XP_002306558.1| predicted protein [Populus tric... 250 3e-064
gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 ... 249 7e-064
gi|255545842|ref|XP_002513981.1| ribonucleoprotein, chloroplast,... 239 1e-060
gi|51968436|dbj|BAD42910.1| putative protein [Arabidopsis thaliana] 181 3e-043
gi|115476954|ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japo... 168 3e-039
gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT... 161 3e-037
gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays] 160 4e-037
gi|194696360|gb|ACF82264.1| unknown [Zea mays] 160 6e-037
gi|7267548|emb|CAB78029.1| putative protein [Arabidopsis thaliana] 158 2e-036
gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) fa... 145 2e-032
gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT... 139 8e-031
gi|255639879|gb|ACU20232.1| unknown [Glycine max] 132 2e-028
gi|238010966|gb|ACR36518.1| unknown [Zea mays] 91 3e-016
>gi|22328520|ref|NP_192643.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 304
Score = 414 bits (1062), Expect = 2e-113
Identities = 219/289 (75%), Positives = 240/289 (83%), Gaps = 19/289 (6%)
Frame = -3
Query: 1128 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 949
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 948 ESSSSS--------EEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNR 793
ESSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 792 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 613
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 194
Query: 612 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 433
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 195 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
Query: 432 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 255 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 303
>gi|51969402|dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 413 bits (1059), Expect = 5e-113
Identities = 218/289 (75%), Positives = 240/289 (83%), Gaps = 19/289 (6%)
Frame = -3
Query: 1128 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 949
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 948 ESSSSS--------EEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNR 793
+SSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMSMHKKERNR
Sbjct: 75 DSSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 792 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 613
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 194
Query: 612 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 433
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 195 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
Query: 432 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 255 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 303
>gi|297808953|ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 406 bits (1043), Expect = 4e-111
Identities = 207/244 (84%), Positives = 224/244 (91%), Gaps = 7/244 (2%)
Frame = -3
Query: 1005 SKPRNLTSCFSATTQEPILESSSSS------EEISKTRLIAQNVPWTSTPEDIRSLFEKY 844
+K RN T+ FS TTQ+P+LESSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKY
Sbjct: 56 AKSRNFTTYFSTTTQDPVLESSSSSATEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKY 115
Query: 843 GNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTY 664
GNV+D+EMSMHKKERNRGLVFIEMASP++AA+AL++LES +YEGRRLKV YAK KKKKTY
Sbjct: 116 GNVIDIEMSMHKKERNRGLVFIEMASPDEAATALKSLESCDYEGRRLKVDYAKTKKKKTY 175
Query: 663 APREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVS 484
APREKP+PVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIF ENPRRSSGYGFVS
Sbjct: 176 APREKPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFQENPRRSSGYGFVS 235
Query: 483 FKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPP-DEEEPSESETMTQED 307
FKTKK A+AAL+EFQGKDFMGRPIRLA+SKQFVKLQAKEGLQPP +EEEPS SE MTQE
Sbjct: 236 FKTKKQAEAALIEFQGKDFMGRPIRLAKSKQFVKLQAKEGLQPPEEEEEPSPSEAMTQEV 295
Query: 306 EIPA 295
E PA
Sbjct: 296 ETPA 299
>gi|145332989|ref|NP_001078360.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 244
Score = 382 bits (980), Expect = 7e-104
Identities = 193/237 (81%), Positives = 213/237 (89%), Gaps = 3/237 (1%)
Frame = -3
Query: 996 RNLTSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMS 817
R+++ S+ Q+P + ISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMS
Sbjct: 7 RDVSRLNSSKIQKPHFVLLHHNTRISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMS 66
Query: 816 MHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPV 637
MHKKERNRGLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PV
Sbjct: 67 MHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPV 126
Query: 636 PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADA 457
PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+A
Sbjct: 127 PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEA 186
Query: 456 ALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
AL+EFQGKDF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 187 ALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 243
>gi|7267547|emb|CAB78028.1| putative protein [Arabidopsis thaliana]
Length = 225
Score = 293 bits (749), Expect = 4e-077
Identities = 147/169 (86%), Positives = 158/169 (93%), Gaps = 3/169 (1%)
Frame = -3
Query: 792 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 613
GLVFIEMASPE+A++A +LESYEYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 56 GLVFIEMASPEEASTAFISLESYEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 115
Query: 612 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 433
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 116 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 175
Query: 432 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 176 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 224
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 271 bits (691), Expect = 2e-070
Identities = 147/254 (57%), Positives = 182/254 (71%), Gaps = 3/254 (1%)
Frame = -3
Query: 1056 NFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTST 877
NFSL P LS + + NLT ++T+++ E S EE S+TRL+AQNVPWTST
Sbjct: 41 NFSLSSFHFPRLSLITTKQTLNLTPTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTST 100
Query: 876 PEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKV 697
PEDIR+LFEK+G V++VE+SM+KK RNRGL F+EM SPE+A AL LESYE+EGR +KV
Sbjct: 101 PEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKV 160
Query: 696 AYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHEN 517
YA+ KK+KT P KP V TFNLFVANL++EA +K LKEFFD TG VVS EV++ +N
Sbjct: 161 NYARPKKEKTAPPPVKP-KVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDN 219
Query: 516 PRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEP 337
PRR SGYGFVSFK+KK A+AAL EFQGK FMGRPIR+ R ++FV+ Q +G E+ P
Sbjct: 220 PRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQ-QPGDG-SAKSEDTP 277
Query: 336 SESETMTQEDEIPA 295
SE E PA
Sbjct: 278 SELSVNGAEAPQPA 291
>gi|225459201|ref|XP_002285735.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 294
Score = 251 bits (639), Expect = 3e-064
Identities = 137/255 (53%), Positives = 171/255 (67%), Gaps = 6/255 (2%)
Frame = -3
Query: 1050 SLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPI---LESSSSSEEISKTRLIAQNVPWTS 880
+LP T ++ H+S S A+ + + EE S+TRLIAQN+PWT
Sbjct: 41 ALPLRTTRRINLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTC 100
Query: 879 TPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLK 700
T +DIRSLFEKYG V+DVE+SMH K RNRGL FI M SPE+A +AL LESYE EGR +K
Sbjct: 101 TAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIK 160
Query: 699 VAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHE 520
V YA +KKK +P + PV +NLF+ANL ++ARAK L+EFF + NVVS EVIFHE
Sbjct: 161 VNYANPQKKKPSSPIQH-KPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHE 219
Query: 519 NPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 340
NPRRSSGYGFVSF +K+ AD AL FQG+ FMGRP+R+ARS++FVK + K Q D
Sbjct: 220 NPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVAN 279
Query: 339 P--SESETMTQEDEI 301
P S SE + D+I
Sbjct: 280 PLNSNSEQSGEGDDI 294
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 250 bits (638), Expect = 3e-064
Identities = 127/208 (61%), Positives = 154/208 (74%), Gaps = 1/208 (0%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
++ EE SKTRL A NVPW T EDIR+LF+K+G VVDVE+SM+ K RNRGL F+ M
Sbjct: 93 KAEEKEEEFSKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMG 152
Query: 768 SPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARA 589
SPE+A +AL LESYE+EGR LK+ YAKAKKKK +P P P PTFNLFVANL FEA++
Sbjct: 153 SPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKP-SPPPPPKPGPTFNLFVANLPFEAKS 211
Query: 588 KHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIR 409
K LKEFF A+ NVVS E+IFH+NPRR SGYGFV+FKTKK AD A+ F K+FMGR +R
Sbjct: 212 KDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLR 271
Query: 408 LARSKQFVKLQAKEGLQPPDEEEPSESE 325
+ARS+QFVK + ++ Q ESE
Sbjct: 272 VARSRQFVKQRKEDAAQSDGTSGELESE 299
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis
vinifera]
Length = 294
Score = 249 bits (635), Expect = 7e-064
Identities = 130/216 (60%), Positives = 158/216 (73%), Gaps = 3/216 (1%)
Frame = -3
Query: 942 SSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASP 763
+ EE S+TRLIAQN+PWT T +DIRSLFEKYG V+DVE+SMH K RNRGL FI M SP
Sbjct: 80 NDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSP 139
Query: 762 EDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKH 583
E+A +AL LESYE EGR +KV YA +KKK +P + PV +NLF+ANL ++ARAK
Sbjct: 140 EEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQH-KPVTPYNLFIANLPYQARAKD 198
Query: 582 LKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLA 403
L+EFF + NVVS EVIFHENPRRSSGYGFVSF +K+ AD AL FQG+ FMGRP+R+A
Sbjct: 199 LREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVA 258
Query: 402 RSKQFVKLQAKEGLQPPDEEEP--SESETMTQEDEI 301
RS++FVK + K Q D P S SE + D+I
Sbjct: 259 RSRRFVKRENKMSDQTEDVANPLNSNSEQSGEGDDI 294
>gi|255545842|ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 305
Score = 239 bits (608), Expect = 1e-060
Identities = 119/202 (58%), Positives = 150/202 (74%), Gaps = 3/202 (1%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
E EE S TR++A NVPW T EDIR+LFEK+G VVDVE+SM+ K RNRGL F+ M
Sbjct: 87 EQEQEQEEFSTTRVLASNVPWNCTTEDIRALFEKFGTVVDVELSMYNKTRNRGLAFVSMG 146
Query: 768 SPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARA 589
SPE+AA+A+++L+SYE+EGR LK+ YAK KK+K P P PVPTFNLFVANL F+A+
Sbjct: 147 SPEEAATAIKSLDSYEFEGRSLKMNYAKLKKEKPLPPL-PPKPVPTFNLFVANLPFDAKD 205
Query: 588 KHLKEFFDADTGNVVSTEVIF--HENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRP 415
LKEFF ++ ++ S E+++ H+ PR+ SGYGFV+FKTKK ADAAL F K FMGRP
Sbjct: 206 NDLKEFFKSEGADIASAEIVYHNHDKPRKPSGYGFVAFKTKKEADAALSTFADKVFMGRP 265
Query: 414 IRLARSKQFVKLQAKEGLQPPD 349
IR+ARSKQFV+ +EG Q D
Sbjct: 266 IRVARSKQFVRQPREEGQQSDD 287
>gi|51968436|dbj|BAD42910.1| putative protein [Arabidopsis thaliana]
Length = 171
Score = 181 bits (457), Expect = 3e-043
Identities = 101/156 (64%), Positives = 115/156 (73%), Gaps = 16/156 (10%)
Frame = -3
Query: 1128 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 949
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 948 ESSSSS--------EEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNR 793
ESSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 792 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAK 685
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAK 170
>gi|115476954|ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group]
Length = 269
Score = 168 bits (423), Expect = 3e-039
Identities = 94/222 (42%), Positives = 136/222 (61%), Gaps = 9/222 (4%)
Frame = -3
Query: 984 SCFSATTQEPILESSSSSEEIS--KTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMH 811
+C ++ + P E+ + EE +TRLIAQN+PW T +D+R+LF K+G+VVDVE+SM+
Sbjct: 48 ACCASASVAPAAEAEAVVEEPEGPRTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMY 107
Query: 810 KKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPT 631
RNRGL F+ M S E+A SAL L S R +KV + +++KK+ P P+P
Sbjct: 108 NSTRNRGLAFVTMGSEEEALSALNHLNSTTLNDRTIKVDFTRSRKKQYVVP---SAPMPK 164
Query: 630 FNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGFVSFKTKKMADAA 454
++FV NL + R++HL+E F A T V S EV+FH +PRRS+GYGFVSF +K+ A+AA
Sbjct: 165 HSVFVGNLTWRVRSRHLRELF-ASTPGVQSVEVVFHTTSPRRSAGYGFVSFSSKEAAEAA 223
Query: 453 LLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSES 328
+ F G MGR I + K + P +E+ +ES
Sbjct: 224 ISTFNGTKLMGRSINVMFKDDNAK--KNKSAAPTEEDLKAES 263
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220
[Sorghum bicolor]
Length = 266
Score = 161 bits (406), Expect = 3e-037
Identities = 95/248 (38%), Positives = 142/248 (57%), Gaps = 7/248 (2%)
Frame = -3
Query: 1080 PNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPILESSSSSEEISKTRLIA 901
P P + + ++ P S SR + ++ + Q P E+ + + +TRL+A
Sbjct: 20 PRPPLRFPKHHVSFAAPAS-SRAAFAACAAASAPAAPAAQAP--EAETVEQVGPRTRLVA 76
Query: 900 QNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYE 721
QN+PW ST +++R+LF+ +G+VV VE+SM+ +NRGL F+ M S EDA +AL L S
Sbjct: 77 QNIPWDSTADEMRALFQTHGSVVGVELSMYSASKNRGLAFVTMGSEEDALAALTHLNSTI 136
Query: 720 YEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVS 541
R++KV +A+ +KK+ P P+ + +FV NL + R +HL+E F A V+S
Sbjct: 137 LNDRKIKVDFARPRKKQPKQPVVVSNPMEKYIVFVGNLTWRVRNRHLRELF-ASAPGVIS 195
Query: 540 TEVIFH-ENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEG 364
EVIFH PRRS+GY FVSF +K+ A+AA+ F GK MGRPI + + K E
Sbjct: 196 AEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAFNGKILMGRPINVMLKDENGK--KNES 253
Query: 363 LQPPDEEE 340
P +E E
Sbjct: 254 SVPKEEAE 261
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 160 bits (404), Expect = 4e-037
Identities = 93/236 (39%), Positives = 134/236 (56%), Gaps = 7/236 (2%)
Frame = -3
Query: 1011 HLSKPRNLTSCFSA---TTQEPILESSSSSEEI--SKTRLIAQNVPWTSTPEDIRSLFEK 847
H S +C +A Q P E+ + + E KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 846 YGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 667
+G+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 666 YAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGF 490
P + +FV NL + R +HL+E F A VVS EVIFH PRRS+GY F
Sbjct: 154 KQPAVVSDATEKYVVFVGNLTWRVRNRHLRELF-ASAPGVVSAEVIFHTTTPRRSAGYAF 212
Query: 489 VSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESET 322
VSF +K+ A AA+ F GK MGRPI + + + + E EPS+ ++
Sbjct: 213 VSFSSKESAGAAISAFNGKILMGRPINVMFKDENGEKNESSSVPKKAEVEPSDGQS 268
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
Length = 275
Score = 160 bits (403), Expect = 6e-037
Identities = 93/236 (39%), Positives = 134/236 (56%), Gaps = 7/236 (2%)
Frame = -3
Query: 1011 HLSKPRNLTSCFSA---TTQEPILESSSSSEEI--SKTRLIAQNVPWTSTPEDIRSLFEK 847
H S +C +A Q P E+ + + E KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 846 YGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 667
+G+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 666 YAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGF 490
P + +FV NL + R +HL+E F A VVS EVIFH PRRS+GY F
Sbjct: 154 KQPAVVSDDTEKYVVFVGNLTWRVRNRHLRELF-ASAPGVVSAEVIFHTTTPRRSAGYAF 212
Query: 489 VSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESET 322
VSF +K+ A AA+ F GK MGRPI + + + + E EPS+ ++
Sbjct: 213 VSFSSKESAGAAISAFNGKILMGRPINVMFKDENGEKNEPSSVPKKAEVEPSDDQS 268
>gi|7267548|emb|CAB78029.1| putative protein [Arabidopsis thaliana]
Length = 211
Score = 158 bits (399), Expect = 2e-036
Identities = 89/142 (62%), Positives = 103/142 (72%), Gaps = 16/142 (11%)
Frame = -3
Query: 1128 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 949
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 948 ESSSSS--------EEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNR 793
ESSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 792 GLVFIEMASPEDAASALQALES 727
GLVFIEMASPE+AA+AL++LES
Sbjct: 135 GLVFIEMASPEEAATALKSLES 156
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 308
Score = 145 bits (364), Expect = 2e-032
Identities = 91/239 (38%), Positives = 135/239 (56%), Gaps = 11/239 (4%)
Frame = -3
Query: 987 TSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHK 808
TS T+QE E + +S K +L N+PW+ + DI LF + G V +VE+ K
Sbjct: 73 TSADEETSQEEKTEETQNSN--LKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQK 130
Query: 807 KERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT-YAPREKPTPVP- 634
+NRG F+ MAS E+A +A+ ++++ GR + V++A+ KK T +P + P+P P
Sbjct: 131 DGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPG 190
Query: 633 --TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMAD 460
L+V+NLA++AR+ HL+E F A N VS V+F + RSSGYGFVSF T++ A+
Sbjct: 191 DTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAE 250
Query: 459 AALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESET-MTQEDEIPAPEN 286
A+ + GK+ MGRPI L +F A E E + SE T ED+ + EN
Sbjct: 251 NAITKLNGKEIMGRPITL----KFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEEN 305
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506
[Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 139 bits (350), Expect = 8e-031
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 7/231 (3%)
Frame = -3
Query: 987 TSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHK 808
TS T+QE E + S K +L N+PW+ + DI LF + G V +VE+ K
Sbjct: 73 TSAEEETSQEEKTEETQKSN--LKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQK 130
Query: 807 KERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT-YAPREKPTPVP- 634
+NRG F+ MAS E+A +A+ ++ + GR + V +A+ KK T P + P+P P
Sbjct: 131 DGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPG 190
Query: 633 --TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMAD 460
L+V+NLA++AR+ HL+E F A N VS V+F + RSSGYGFVSF T++ A+
Sbjct: 191 DTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEAE 250
Query: 459 AALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESETMTQED 307
A+ + GK+ MGRPI L S + ++++G D + +T+ ++
Sbjct: 251 DAIAKLDGKEIMGRPIILKFSLRSAS-ESEDGDTVGDNNTSEDGDTVEDKN 300
>gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 132 bits (330), Expect = 2e-028
Identities = 83/227 (36%), Positives = 129/227 (56%), Gaps = 13/227 (5%)
Frame = -3
Query: 975 SATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERN 796
+AT + P E + ++ + K L N+ W+ T DI LF + G V DVE+ K R+
Sbjct: 64 AATEETP--ELTQPTDNVKK--LYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKDGRS 119
Query: 795 RGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVP---TFN 625
+G F+ MAS E+A +A+ +SYE GR ++V AK + KK +P P P P
Sbjct: 120 KGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAK-RFKKPPSPPPPPGPRPGETRHV 178
Query: 624 LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLE 445
++ +NLA++AR+ HL++ F + S V+F RS+GYGFVSF TK+ A+AA+
Sbjct: 179 IYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAIST 238
Query: 444 FQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESETMTQEDE 304
GK+ MGRP+RL +F + + K G + DE++ ++ + EDE
Sbjct: 239 VDGKELMGRPLRL----KFSEKKDKAG-REKDEDQDKDAGSEEDEDE 280
>gi|238010966|gb|ACR36518.1| unknown [Zea mays]
Length = 169
Score = 91 bits (224), Expect = 3e-016
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Frame = -3
Query: 1011 HLSKPRNLTSCFSA---TTQEPILESSSSSEEI--SKTRLIAQNVPWTSTPEDIRSLFEK 847
H S +C +A Q P E+ + + E KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 846 YGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 667
+G+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 666 YAP 658
P
Sbjct: 154 KQP 156
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,628,988,984
Number of Sequences: 15229318
Number of Extensions: 1572628988984
Number of Successful Extensions: 405575147
Number of sequences better than 0.0: 0
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