BLASTX 7.6.2
Query= UN13138 /QuerySize=1173
(1172 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2... 69 4e-011
sp|Q9USY2|YOW4_SCHPO Uncharacterized RNA-binding protein C1861.0... 66 4e-010
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 62 9e-009
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 60 2e-008
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 60 2e-008
sp|Q7SG09|MRD1_NEUCR Multiple RNA-binding domain-containing prot... 57 2e-007
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 56 5e-007
sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing prot... 55 1e-006
sp|Q75A83|MRD1_ASHGO Multiple RNA-binding domain-containing prot... 54 3e-006
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 54 3e-006
sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing prot... 53 3e-006
sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing prot... 53 3e-006
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau ... 53 4e-006
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau ... 53 4e-006
sp|Q5AJS6|MRD1_CANAL Multiple RNA-binding domain-containing prot... 53 4e-006
sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing prot... 52 7e-006
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 52 1e-005
>sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2g36660
OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1
Length = 609
Score = 69 bits (168), Expect = 4e-011
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Frame = -3
Query: 915 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQA 736
T L +N+ + + +R F ++G +V + ++ + RG F+ +PEDA A +
Sbjct: 201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAET 260
Query: 735 LESYEYEGRRLKVAYAKAKKKKTYAPR--------EKPTPVPTFNLFVANLAFEARAKHL 580
+ ++ + L V A+ K ++ R E+ N++V N+ + L
Sbjct: 261 VNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEEL 320
Query: 579 KEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRP--IRL 406
++ F + G + ST+++ E +S G+GFV F T + A A+ F G+ F G+P + +
Sbjct: 321 RKHF-SQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAI 378
Query: 405 ARSKQFVKLQ 376
A+ K+ K+Q
Sbjct: 379 AQKKEDRKMQ 388
>sp|Q9USY2|YOW4_SCHPO Uncharacterized RNA-binding protein C1861.04c
OS=Schizosaccharomyces pombe GN=SPBC1861.04c PE=2 SV=1
Length = 1014
Score = 66 bits (160), Expect = 4e-010
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Frame = -3
Query: 915 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQA 736
T L N P T DI LF YGNVVDV + NR +++M P++A +ALQ
Sbjct: 666 TNLYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQL 725
Query: 735 LESYEYEGRRLKVAYAKAKKK-----KTYAPREKPTPVPTFNLFVANLAFEARAKHLKEF 571
+ E ++V + ++ Y RE L+V N+ F+ K ++ F
Sbjct: 726 HKKLLEEKYPIQVFISDPLRRTPRSGAVYEGRE---------LYVTNIDFKVNEKDVETF 776
Query: 570 FDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQ 391
F D G V S + N + G+G+V T + A+ A L GK R + + SK
Sbjct: 777 F-RDYGQVESVRIPKRFNQHK--GFGYVVMTTNQDAENA-LSAAGKQLGNRVLNVVLSKP 832
Query: 390 FVKLQAKEGLQPPDEEEPSESETMTQEDEIPAPE 289
L+ K + D ++S T+ +++ P+
Sbjct: 833 RESLE-KTRVSSNDNRTLAKSFETTESNKMSTPK 865
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 62 bits (148), Expect = 9e-009
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 9/231 (3%)
Frame = -3
Query: 1014 LHLSKPRNLTSCFSATTQEPILE--SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYG 841
+ LS+ R+ + + P+ E + + EE + + P D+ F G
Sbjct: 118 IKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVG 177
Query: 840 NVVDVEM-SMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTY 664
V DV M S R+RG+ ++E A+ L G + V ++A+K +
Sbjct: 178 KVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GLTGQRVLGVPIIVQASQAEKNRAA 236
Query: 663 APR---EKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYG 493
A +K + P L+V +L F L+ F+ G + S +++ RS GYG
Sbjct: 237 AMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIFE-PFGRIESIQLMMDSETGRSKGYG 294
Query: 492 FVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 340
F++F + A AL + G + GRP+++ + + DE E
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 60 bits (145), Expect = 2e-008
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 9/231 (3%)
Frame = -3
Query: 1014 LHLSKPRNLTSCFSATTQEPILE--SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYG 841
+ LS+ R+ + + P+ E + + EE + + P D+ F G
Sbjct: 118 IKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVG 177
Query: 840 NVVDVEM-SMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTY 664
V DV M S R++G+ ++E A+ L G + V ++A+K +
Sbjct: 178 KVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAA 236
Query: 663 APR---EKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYG 493
A +K + P L+V +L F L+ F+ G + S +++ RS GYG
Sbjct: 237 AMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIFE-PFGRIESIQLMMDSETGRSKGYG 294
Query: 492 FVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 340
F++F + A AL + G + GRP+++ + + DE E
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 60 bits (145), Expect = 2e-008
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 9/231 (3%)
Frame = -3
Query: 1014 LHLSKPRNLTSCFSATTQEPILE--SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYG 841
+ LS+ R+ + + P+ E + + EE + + P D+ F G
Sbjct: 118 IKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVG 177
Query: 840 NVVDVEM-SMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTY 664
V DV M S R++G+ ++E A+ L G + V ++A+K +
Sbjct: 178 KVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAA 236
Query: 663 APR---EKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYG 493
A +K + P L+V +L F L+ F+ G + S +++ RS GYG
Sbjct: 237 AMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIFE-PFGRIESIQLMMDSETGRSKGYG 294
Query: 492 FVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 340
F++F + A AL + G + GRP+++ + + DE E
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>sp|Q7SG09|MRD1_NEUCR Multiple RNA-binding domain-containing protein 1
OS=Neurospora crassa GN=mrd-1 PE=3 SV=1
Length = 827
Score = 57 bits (137), Expect = 2e-007
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = -3
Query: 915 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQA 736
T+L+ +N+P+ T +++R+LF YG +V + + + +RG F E ++ ++A +A +
Sbjct: 704 TKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 763
Query: 735 LESYEYEGRRLKVAYAKAK---KKKTYAPREKPTPVPTFNLFVANLAFEARAK 586
L+ GRRL + +A+A+ + A EK T + + L RAK
Sbjct: 764 LKDTHILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQVNKVALQQLTGTGRAK 816
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1
Length = 414
Score = 56 bits (133), Expect = 5e-007
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = -3
Query: 684 AKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRS 505
+ KK+ E+P +FV L++ + LK+ F+ G V+ VI+ RS
Sbjct: 155 SNKKQKNEETEEPA-----TIFVGRLSWSIDDEWLKKEFE-HIGGVIGARVIYERGTDRS 208
Query: 504 SGYGFVSFKTKKMADAALLEFQGKDFMGRPI 412
GYG+V F+ K A+ A+ E QGK+ GRPI
Sbjct: 209 RGYGYVDFENKSYAEKAIQEMQGKEIDGRPI 239
>sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing protein 1
OS=Yarrowia lipolytica GN=MRD1 PE=3 SV=1
Length = 828
Score = 55 bits (130), Expect = 1e-006
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
E ++ +++ ++++ +N+P+ +T +D++ LF +G++ V + +RG F E
Sbjct: 692 EETTETKKAIDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGFAFAEYV 751
Query: 768 SPEDAASALQALESYEYEGRRLKVAYAKA 682
S ++A A+ AL+ GRRL + YA+A
Sbjct: 752 SAKEAEHAMSALQGTHLLGRRLVLQYAQA 780
>sp|Q75A83|MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 OS=Ashbya
gossypii GN=MRD1 PE=3 SV=1
Length = 838
Score = 54 bits (127), Expect = 3e-006
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = -3
Query: 963 QEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLV 784
Q + ++S S++ ++I +N+P+ +T +D+ LF +G + V + + RG
Sbjct: 696 QSSLPKTSKGSKKKISGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFA 755
Query: 783 FIEMASPEDAASALQALESYEYEGRRLKVAYAK 685
F+E P +A +A+ L+ GRRL + YA+
Sbjct: 756 FVEFLLPSEAENAMDQLQGVHLLGRRLVMQYAE 788
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3
Length = 744
Score = 54 bits (127), Expect = 3e-006
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = -3
Query: 957 PILESSSSSEEISK--TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLV 784
P E S EE+ T + +N+ T ED R LFEK+G++ ++ + ++RG
Sbjct: 213 PKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFG 272
Query: 783 FIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKK 670
F+ E AA A+ L E++G++L V A+ K ++
Sbjct: 273 FVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHER 310
>sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing protein 1
OS=Aspergillus fumigatus GN=mrd1 PE=3 SV=1
Length = 825
Score = 53 bits (126), Expect = 3e-006
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
E ++ +T++I +N+P+ +T +D+RSLF YG + V + RG F +
Sbjct: 691 EDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFV 750
Query: 768 SPEDAASALQALESYEYEGRRLKVAYA 688
S +A +A+ AL++ GRRL + +A
Sbjct: 751 SAREAENAMDALKNTHLLGRRLVLEFA 777
>sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing protein 1
OS=Emericella nidulans GN=mrd1 PE=3 SV=1
Length = 819
Score = 53 bits (126), Expect = 3e-006
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
E ++ +T++I +N+P+ +T +D+RSLF YG + V + RG F +
Sbjct: 686 EDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFV 745
Query: 768 SPEDAASALQALESYEYEGRRLKVAYA 688
S +A +A+ AL++ GRRL + +A
Sbjct: 746 SAREAENAMDALKNTHLLGRRLVLEFA 772
>sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau variant OS=Homo
sapiens GN=CSTF2T PE=1 SV=1
Length = 616
Score = 53 bits (125), Expect = 4e-006
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 627 NLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALL 448
++FV N+ +EA + LK+ F ++ G+VVS +++ + GYGF ++ ++ A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIF-SEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 447 EFQGKDFMGRPIRL 406
G++F GR +R+
Sbjct: 76 NLNGREFSGRALRV 89
>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau variant OS=Mus
musculus GN=Cstf2t PE=1 SV=2
Length = 632
Score = 53 bits (125), Expect = 4e-006
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 627 NLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALL 448
++FV N+ +EA + LK+ F ++ G+VVS +++ + GYGF ++ ++ A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIF-SEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 447 EFQGKDFMGRPIRL 406
G++F GR +R+
Sbjct: 76 NLNGREFSGRALRV 89
>sp|Q5AJS6|MRD1_CANAL Multiple RNA-binding domain-containing protein 1
OS=Candida albicans GN=MRD1 PE=3 SV=1
Length = 841
Score = 53 bits (125), Expect = 4e-006
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = -3
Query: 945 SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMAS 766
+SS + +++I +N+P+ +T +D+ LF +G + V + + RG F+E
Sbjct: 707 ASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNL 766
Query: 765 PEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPT-----PVPTFNLFVANLA 604
++A +A+ LE GRRL + YA+ + E+ T V T NL A LA
Sbjct: 767 MKEAETAMSQLEGVHLLGRRLVMQYAEQDPENAEVEIERMTKKVKKQVATQNLAAARLA 825
>sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing protein 1
OS=Kluyveromyces lactis GN=MRD1 PE=3 SV=1
Length = 878
Score = 52 bits (123), Expect = 7e-006
Identities = 26/101 (25%), Positives = 53/101 (52%)
Frame = -3
Query: 945 SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMAS 766
+SS ++ ++ ++I +N+P+ +T +D+ LF +G + V + + RG F+E
Sbjct: 742 ASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLL 801
Query: 765 PEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPT 643
P++A +A+ L+ GRRL + + + + EK T
Sbjct: 802 PKEAENAMDQLQGVHLLGRRLVMEFVEQDPEDVEQQIEKMT 842
>sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05
OS=Schizosaccharomyces pombe GN=SPAC328.05 PE=2 SV=2
Length = 468
Score = 52 bits (122), Expect = 1e-005
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = -3
Query: 897 NVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEY 718
N+PW ++ ++ LF G+V+ ++ R++G ++ + DAAS+++ L Y Y
Sbjct: 320 NLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSIEKLNGYRY 379
Query: 717 EGRRLKVAYA 688
GR L+++YA
Sbjct: 380 GGRPLQLSYA 389
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0
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