BLASTX 7.6.2
Query= UN13138 /QuerySize=1173
(1172 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09040.1 | Symbols: | RNA recognition motif (... 414 8e-116
TAIR9_protein||AT4G09040.2 | Symbols: | RNA recognition motif (... 382 3e-106
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 145 7e-035
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 82 8e-016
TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A... 72 8e-013
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 52 6e-007
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 52 6e-007
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 50 3e-006
>TAIR9_protein||AT4G09040.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:5795075-5797315 REVERSE
Length = 305
Score = 414 bits (1062), Expect = 8e-116
Identities = 219/289 (75%), Positives = 240/289 (83%), Gaps = 19/289 (6%)
Frame = -3
Query: 1128 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 949
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 948 ESSSSS--------EEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNR 793
ESSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 792 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 613
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 194
Query: 612 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 433
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 195 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
Query: 432 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 255 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 303
Score = 60 bits (144), Expect = 2e-009
Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 1146 MALLRLPPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLH 1009
MALLRLP ISLQ LGH+S K PNP V+ TN SL ST PSL RLH
Sbjct: 1 MALLRLPGISLQILGHKSNQKNPNPNVAFTNHSLSLST-PSLCRLH 45
>TAIR9_protein||AT4G09040.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:5795075-5797193 REVERSE
Length = 245
Score = 382 bits (980), Expect = 3e-106
Identities = 193/237 (81%), Positives = 213/237 (89%), Gaps = 3/237 (1%)
Frame = -3
Query: 996 RNLTSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMS 817
R+++ S+ Q+P + ISKTRLIAQNVPWTSTPEDIRSLFEKYG+V+D+EMS
Sbjct: 7 RDVSRLNSSKIQKPHFVLLHHNTRISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMS 66
Query: 816 MHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPV 637
MHKKERNRGLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PV
Sbjct: 67 MHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPV 126
Query: 636 PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADA 457
PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+A
Sbjct: 127 PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEA 186
Query: 456 ALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPD---EEEPSESETMTQEDEIPA 295
AL+EFQGKDF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEEPS+SETMTQE E PA
Sbjct: 187 ALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 243
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 145 bits (364), Expect = 7e-035
Identities = 91/239 (38%), Positives = 135/239 (56%), Gaps = 11/239 (4%)
Frame = -3
Query: 987 TSCFSATTQEPILESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHK 808
TS T+QE E + +S K +L N+PW+ + DI LF + G V +VE+ K
Sbjct: 73 TSADEETSQEEKTEETQNSN--LKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQK 130
Query: 807 KERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT-YAPREKPTPVP- 634
+NRG F+ MAS E+A +A+ ++++ GR + V++A+ KK T +P + P+P P
Sbjct: 131 DGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPG 190
Query: 633 --TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMAD 460
L+V+NLA++AR+ HL+E F A N VS V+F + RSSGYGFVSF T++ A+
Sbjct: 191 DTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAE 250
Query: 459 AALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEPSESET-MTQEDEIPAPEN 286
A+ + GK+ MGRPI L +F A E E + SE T ED+ + EN
Sbjct: 251 NAITKLNGKEIMGRPITL----KFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEEN 305
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 82 bits (200), Expect = 8e-016
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = -3
Query: 915 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKE-RNRGLVFIEMASPEDAASALQ 739
T+L N+P+ + + + + N VE+ ++ ++RG F+ M++ ED +
Sbjct: 85 TKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIID 144
Query: 738 ALESYEYEGRRLKVAYAKAKKKKTYAPREKPT-PVPTFNLFVANLAFEARAKHLKEFFDA 562
L+ EY GR LKV +A K P ++P P LFV NL++ ++ L F
Sbjct: 145 NLDGTEYLGRALKVNFADKPK-----PNKEPLYPETEHKLFVGNLSWTVTSESLAGAF-R 198
Query: 561 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIR--LARSKQF 388
+ G+VV V+F + RS GYGFV + +K + AL G + GR IR LA+ K+F
Sbjct: 199 ECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGKKF 258
>TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A) BINDING
PROTEIN 4); RNA binding / translation initiation factor |
chr2:9943209-9946041 FORWARD
Length = 663
Score = 72 bits (174), Expect = 8e-013
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Frame = -3
Query: 948 ESSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 769
E S+++++ T + +N+ +T +++++ F +YG++ + ++R F+
Sbjct: 214 ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFE 273
Query: 768 SPEDAASALQALESYEYEGRRLKVAYAKAKKKK--------TYAPREKPTPVPTFNLFVA 613
+PEDAA A++AL +++ + V A+ K ++ + NL+V
Sbjct: 274 NPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVK 333
Query: 612 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 433
NL + L+E F A+ G + S +V+ + S G GFV+F A L E GK
Sbjct: 334 NLDDTVTDEKLRELF-AEFGTITSCKVM-RDPSGTSKGSGFVAFSAASEASRVLNEMNGK 391
Query: 432 DFMGRPIRLARSKQFVKLQAK 370
G+P+ +A +++ + +AK
Sbjct: 392 MVGGKPLYVALAQRKEERRAK 412
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 52 bits (123), Expect = 6e-007
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = -3
Query: 867 IRSLFEKYGNVVDVEMSMHK-KERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAY 691
+ S F + G +V V++ +K + G FIE S A LQ + G L
Sbjct: 40 LTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRL 99
Query: 690 AKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPR 511
A ++ +K P ++FV +LA + L+E F +V +V+ +
Sbjct: 100 NWA----SFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTG 155
Query: 510 RSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLA 403
RS GYGFV F + + A+ E G RP+R++
Sbjct: 156 RSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRIS 191
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 52 bits (123), Expect = 6e-007
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = -3
Query: 867 IRSLFEKYGNVVDVEMSMHK-KERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAY 691
+ S F + G +V V++ +K + G FIE S A LQ + G L
Sbjct: 40 LTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRL 99
Query: 690 AKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPR 511
A ++ +K P ++FV +LA + L+E F +V +V+ +
Sbjct: 100 NWA----SFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTG 155
Query: 510 RSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLA 403
RS GYGFV F + + A+ E G RP+R++
Sbjct: 156 RSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRIS 191
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 50 bits (117), Expect = 3e-006
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Frame = -3
Query: 867 IRSLFEKYGNVVDVEMSMHK-KERNRGLVFIEMASPEDAASALQALESYEYEGR----RL 703
I S+F + G ++ +K ++ G FIE S A LQ RL
Sbjct: 76 IMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRL 135
Query: 702 KVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH 523
A A A +K+ T P +FV +LA E L + F G+V +V+
Sbjct: 136 NWAQAGAGEKRF------QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLD 189
Query: 522 ENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRL--ARSKQFVKLQ 376
RS GYGFV F + A+ E G+ RP+R+ A +K + +Q
Sbjct: 190 RTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ 240
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,939,524,869
Number of Sequences: 33410
Number of Extensions: 6939524869
Number of Successful Extensions: 237886471
Number of sequences better than 0.0: 0
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