BLASTX 7.6.2
Query= UN13146 /QuerySize=777
(776 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S... 332 2e-091
TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S... 326 1e-089
TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S... 296 1e-080
TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S... 216 1e-056
TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S... 212 3e-055
>TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 178
Score = 332 bits (849), Expect = 2e-091
Identities = 163/183 (89%), Positives = 169/183 (92%), Gaps = 6/183 (3%)
Frame = +2
Query: 92 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 271
MII+E NRREICKYLFKEGV FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 272 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 448
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RG PR +GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGD 119
Query: 449 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGFNAAAPSGSG 628
RPRFGDRDGYR GPRGGD EKGGAPAD+QPSFQ GGGGRPGFGRGAGG++AAAPSGSG
Sbjct: 120 RPRFGDRDGYRGGPRGGD---EKGGAPADFQPSFQ-GGGGRPGFGRGAGGYSAAAPSGSG 175
Query: 629 LP* 637
P*
Sbjct: 176 FP* 178
>TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S10 (RPS10C) |
chr5:21355781-21357003 REVERSE
Length = 180
Score = 326 bits (834), Expect = 1e-089
Identities = 162/184 (88%), Positives = 168/184 (91%), Gaps = 6/184 (3%)
Frame = +2
Query: 92 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 271
MII+E NR+EICKYLFKEGV FAKKDFNL KHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 272 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFE-GD 448
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RGPR E GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGD 119
Query: 449 RPRFGDRDGYRAGPR-GGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGFNAAAPSGS 625
RPRFGDRDGYRAGPR GG+ GGEKGGAPADYQPSFQG G GFGRGAGG++AAAPSGS
Sbjct: 120 RPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSG---RGFGRGAGGYSAAAPSGS 176
Query: 626 GLP* 637
GLP*
Sbjct: 177 GLP* 180
>TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610583 REVERSE
Length = 181
Score = 296 bits (757), Expect = 1e-080
Identities = 148/184 (80%), Positives = 160/184 (86%), Gaps = 5/184 (2%)
Frame = +2
Query: 92 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 271
MII+ETNRREI KYLFKEGVLFAKKDFNLP+HPLIESVPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 272 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 448
AWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG GDRPRG PR +G+
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGE 119
Query: 449 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGG-GGGRPGFGRGAGGFNAAAPSGS 625
R RFGDRDGYR GP+ G G+K GAPADYQP F+GG GG R GFGRGAGGF A +GS
Sbjct: 120 R-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-AGS 177
Query: 626 GLP* 637
LP*
Sbjct: 178 DLP* 181
>TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 150
Score = 216 bits (550), Expect = 1e-056
Identities = 113/150 (75%), Positives = 119/150 (79%), Gaps = 9/150 (6%)
Frame = +2
Query: 92 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 271
MII+E NRREICKYLFKEGV FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 272 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFEGDR 451
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGP G +G +
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRGGDEKGGAPADFQ 119
Query: 452 PRF---GDRDGYRAGPRGGDAGGEKGGAPA 532
P F G R G+ G AGG AP+
Sbjct: 120 PSFQGGGGRPGF-----GRGAGGYSAAAPS 144
Score = 87 bits (215), Expect = 8e-018
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 4/51 (7%)
Frame = +2
Query: 485 GPRGGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGFNAAAPSGSGLP* 637
GPRGGD EKGGAPAD+QPSFQ GGGGRPGFGRGAGG++AAAPSGSG P*
Sbjct: 104 GPRGGD---EKGGAPADFQPSFQ-GGGGRPGFGRGAGGYSAAAPSGSGFP* 150
>TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610203 REVERSE
Length = 135
Score = 212 bits (538), Expect = 3e-055
Identities = 105/138 (76%), Positives = 115/138 (83%), Gaps = 5/138 (3%)
Frame = +2
Query: 230 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGP 409
MQSFKSKEYVRETFAWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG
Sbjct: 1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 59
Query: 410 PGDRPRG-PRFEGDRPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGG-GGGRPGFG 583
GDRPRG PR +G+R RFGDRDGYR GP+ G G+K GAPADYQP F+GG GG R GFG
Sbjct: 60 GGDRPRGPPRGDGER-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFG 118
Query: 584 RGAGGFNAAAPSGSGLP* 637
RGAGGF A +GS LP*
Sbjct: 119 RGAGGFGGGA-AGSDLP* 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,939,524,869
Number of Sequences: 33410
Number of Extensions: 6939524869
Number of Successful Extensions: 237886471
Number of sequences better than 0.0: 0
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