BLASTX 7.6.2
Query= UN13171 /QuerySize=422
(421 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G31985.1 | Symbols: | 60S ribosomal protein L... 111 2e-025
TAIR9_protein||AT3G02190.1 | Symbols: | 60S ribosomal protein L... 106 5e-024
TAIR9_protein||AT2G25210.1 | Symbols: | 60S ribosomal protein L... 96 5e-021
>TAIR9_protein||AT4G31985.1 | Symbols: | 60S ribosomal protein L39 (RPL39C) |
chr4:15469931-15470366 FORWARD
Length = 52
Score = 111 bits (277), Expect = 2e-025
Identities = 50/52 (96%)
Frame = -1
Query: 349 MPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 194
MPSHKSFMIKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF*
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 52
>TAIR9_protein||AT3G02190.1 | Symbols: | 60S ribosomal protein L39 (RPL39B) |
chr3:406005-406342 REVERSE
Length = 52
Score = 106 bits (264), Expect = 5e-024
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 349 MPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 194
MPSHKSFMIKKKL KKMRQNRPIP+WIRLRTDN IRYNAKRRHWRRTKLGF*
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF* 52
>TAIR9_protein||AT2G25210.1 | Symbols: | 60S ribosomal protein L39 (RPL39A) |
chr2:10740157-10740379 FORWARD
Length = 45
Score = 96 bits (238), Expect = 5e-021
Identities = 43/45 (95%)
Frame = -1
Query: 328 MIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 194
MIKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF*
Sbjct: 1 MIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 45
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,939,524,869
Number of Sequences: 33410
Number of Extensions: 6939524869
Number of Successful Extensions: 237886471
Number of sequences better than 0.0: 0
|