BLASTX 7.6.2
Query= UN13203 /QuerySize=1247
(1246 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G28740.1 | Symbols: | FUNCTIONS IN: molecular... 559 2e-159
TAIR9_protein||AT1G02910.1 | Symbols: LPA1 | LPA1 (LOW PSII ACCU... 60 3e-009
>TAIR9_protein||AT4G28740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: LPA1 (LOW
PSII ACCUMULATION1); binding (TAIR:AT1G02910.1); Has 65 Blast hits to
65 proteins in 19 species: Archae - 0; Bacteria - 17; Metazoa - 0;
Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr4:14201051-14202542 FORWARD
Length = 348
Score = 559 bits (1438), Expect = 2e-159
Identities = 288/346 (83%), Positives = 306/346 (88%), Gaps = 7/346 (2%)
Frame = -3
Query: 1175 AEILQRPMAATLASSQAYIYHCHLTKRTLIQTKEPYSPRRLSRHNHIETQVLSPRTWTLT 996
AE L RPM ATL SSQ YIYHCH++K+ L Q KE YS RR+SRHNH E S R LT
Sbjct: 10 AENLARPM-ATLVSSQTYIYHCHISKQALYQAKESYSHRRISRHNHRERLDFSHRNHRLT 68
Query: 995 ISRKHHQPLSLNTVCFAADEPSPSSSSEISADARIRSEVLSPFRSVRMFFYLAFIASASL 816
I+RK QPLS NTVCFAADEP SEISADARIRSEVLSPFRSVRMFFYLAFIAS SL
Sbjct: 69 ITRK-QQPLSFNTVCFAADEP-----SEISADARIRSEVLSPFRSVRMFFYLAFIASGSL 122
Query: 815 GGLIATSRLIGALANPSRSGEVLEIVKGLGIDVGAASLFAFLYFRENKTKNAQMARLSRE 636
GGLIATSRLIGALANP+RSGEVLEIVKGLG+D+GAASLFAFLYF ENKTKNAQMARLSRE
Sbjct: 123 GGLIATSRLIGALANPARSGEVLEIVKGLGVDIGAASLFAFLYFNENKTKNAQMARLSRE 182
Query: 635 ENLAKLKMRVEENNKVISVGDLRGIARLVICAGPGGYIEEAFKRSKEFTQGLVERGVVVV 456
ENL KLKMRVEENNKVISVGDLRG+ARLVICAGP +IEEAFKRSKE+TQGLVERGVVVV
Sbjct: 183 ENLGKLKMRVEENNKVISVGDLRGVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVV 242
Query: 455 AYATDGNTPVLEFDETDSEDEEVSQSRRRLWRVAPVFVSEWERWLDEQKKLAGVSSDSPV 276
AYATDGN+PVLEFDETD DEE+SQ R++LWRV PVFV EWE+WL+EQKKLA VSSDSPV
Sbjct: 243 AYATDGNSPVLEFDETDIADEEMSQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPV 302
Query: 275 YLSLRLDGRVRGSGVGYPPWQAFVAQLPPVKGIWTGLLDGMDGRV* 138
YLSLRLDGRVR SGVGYPPWQAFVAQLPPVKG+WTGLLDGMDGRV*
Sbjct: 303 YLSLRLDGRVRASGVGYPPWQAFVAQLPPVKGMWTGLLDGMDGRV* 348
>TAIR9_protein||AT1G02910.1 | Symbols: LPA1 | LPA1 (LOW PSII ACCUMULATION1);
binding | chr1:655749-658125 REVERSE
Length = 454
Score = 60 bits (143), Expect = 3e-009
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = -3
Query: 365 WRVAPVFVSEWERWLDEQKKLAGVSSDSPVYLSLRLDGRVRGSGVGYPPWQAFVAQLPPV 186
++ V EWERW+ +Q+ GV+ VY+ LRLDGRVR SG G P W +LPP+
Sbjct: 385 FKAETVSPGEWERWIRDQQISEGVNPGDDVYIILRLDGRVRRSGRGMPDWAEISKELPPM 444
Query: 185 KGIWTGL 165
+ + L
Sbjct: 445 DDVLSKL 451
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,939,524,869
Number of Sequences: 33410
Number of Extensions: 6939524869
Number of Successful Extensions: 237886471
Number of sequences better than 0.0: 0
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