BLASTX 7.6.2
Query= UN13246 /QuerySize=1373
(1372 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [A... 576 3e-162
gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid bindin... 567 3e-159
gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana] 565 1e-158
gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis... 411 1e-112
gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [A... 408 1e-111
gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid bindin... 407 3e-111
gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid bindin... 406 4e-111
gi|224086775|ref|XP_002307959.1| predicted protein [Populus tric... 315 1e-083
gi|224137642|ref|XP_002322608.1| predicted protein [Populus tric... 308 2e-081
gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein... 298 2e-078
gi|255561144|ref|XP_002521584.1| r3h domain containing protein, ... 222 1e-055
gi|255552461|ref|XP_002517274.1| r3h domain containing protein, ... 216 1e-053
gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana] 213 7e-053
gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid bindin... 211 2e-052
gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT... 211 4e-052
gi|255636099|gb|ACU18394.1| unknown [Glycine max] 205 3e-050
gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding... 196 7e-048
gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis ... 127 7e-027
gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis ... 126 1e-026
gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis ... 124 3e-026
>gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 333
Score = 576 bits (1484), Expect = 3e-162
Identities = 289/338 (85%), Positives = 309/338 (91%), Gaps = 8/338 (2%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFRPFPTSYLRLAA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFK 562
HRVAQHYGLVTMALDNG GA DGS+NRIL TKT+ESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSENRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 563 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 742
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLR-- 179
Query: 743 PLPPPPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 919
PPP EVKNT +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 180 --PPPLEVKNTCINRNETEVAVNNDPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 920 YDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1099
YDRYVVDPAYRYVRVMPSGQSF+P+P+HIPFHDG FPQMPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPIPIHIPFHDGVFPQMPRGHQANLNYG-HPLNPALSP 294
Query: 1100 FINHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASN 1213
F ++ A+YTPWPNSPAMNYA LN DTNLFRHPSASN
Sbjct: 295 FTHNAASYTPWPNSPAMNYAQPLNGSDTNLFRHPSASN 332
>gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 333
Score = 567 bits (1459), Expect = 3e-159
Identities = 284/338 (84%), Positives = 306/338 (90%), Gaps = 8/338 (2%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFK 562
HRVAQHYGLVTMALDNG GA DGSDNRIL TKT+ESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 563 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 742
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLR-- 179
Query: 743 PLPPPPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 919
PP EV+NT +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 180 --PPSLEVRNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 920 YDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1099
YDRYVVDPAYRYVRVMPSGQSF+PMP+HIPFHDG FP MPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYG-HPLNPALSP 294
Query: 1100 FINHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASN 1213
F ++ A+YTPWPNSP MNYA LN DTNL+R+PSASN
Sbjct: 295 FTHNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASN 332
>gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 565 bits (1454), Expect = 1e-158
Identities = 283/338 (83%), Positives = 305/338 (90%), Gaps = 8/338 (2%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFK 562
HRVAQHYGLVTMALDNG G DGSDNRIL TKT+ESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGTGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 563 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 742
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLR-- 179
Query: 743 PLPPPPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 919
PP EVKNT +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREK+RYDPDYDRS
Sbjct: 180 --PPSLEVKNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKERYDPDYDRS 235
Query: 920 YDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGHHPLNPAMSP 1099
YDRYVVDPAYRYVRVMPSGQSF+PMP+HIPFHDG FP MPRGHQA+LNYG HPLNPA+SP
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYG-HPLNPALSP 294
Query: 1100 FINHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASN 1213
F ++ A+YTPWPNSP MNYA LN DTNL+R+PSASN
Sbjct: 295 FTHNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASN 332
>gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis thaliana]
Length = 343
Score = 411 bits (1056), Expect = 1e-112
Identities = 233/341 (68%), Positives = 262/341 (76%), Gaps = 32/341 (9%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE-SGRPEGF 559
HRVAQHYGL T AL+ GG VDGS NRILATKT ESR+P VCLSEIPVKQPE GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 560 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 739
KIAIK RP RG+G GSGSGV++NL RSVEERKEEYDKARARIFNSP SSDSEDSS+ RA
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST-RA 178
Query: 740 PPLPPPPEV---KNTSV-NRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKD 892
PP PP P + NT+ +R+E EV V+ NS ++ G R+SGRTS +AIIRDREKD
Sbjct: 179 PP-PPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKD 237
Query: 893 RYDPDYDRSYDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGH 1072
RYDPDYDR+ RYVRV P Q+FNP+P+ +PFHD FPQMPR QA LNYG
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYG- 285
Query: 1073 HPLNPAMSPFINHPAAYTPWPNSPAMNYAHSLNRPDTNLFR 1195
HPLNPAM+ +YT WP S M YA +LN D + FR
Sbjct: 286 HPLNPAMT-----APSYTEWP-SATMTYAQTLNASDVHHFR 320
>gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 324
Score = 408 bits (1048), Expect = 1e-111
Identities = 226/333 (67%), Positives = 259/333 (77%), Gaps = 32/333 (9%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE-SGRPEGF 559
HRVAQHYGL T ALD GG VDGS NRILATKT+ESR+P VCLSEIPVKQPE G+PEGF
Sbjct: 62 HRVAQHYGLFTTALD--GGGVDGSGNRILATKTAESRYPYVCLSEIPVKQPEIHGKPEGF 119
Query: 560 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 739
KIAIK RP RGSG GSGSGV++NL RSVEERKEEYD+ARARIFNSP SSDSEDSS+ RA
Sbjct: 120 KIAIKPRPNRGSGGSGSGSGVEKNLLRSVEERKEEYDRARARIFNSPSSSDSEDSST-RA 178
Query: 740 PPLPPPPEV----KNTSVNRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKD 892
PP PPPP + +T +R+E+EV +++NS ++ G R+SGRTS +AIIRDREKD
Sbjct: 179 PP-PPPPRLDSKHNSTCPSRNESEVVINHNSNPVDVERNGVFRDSGRTSRVAIIRDREKD 237
Query: 893 RYDPDYDRSYDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGH 1072
RYDPDYDR+ RYVRV P Q+FNP+P+ + FHD FPQ PR QA +NYG
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLQFHDAIFPQTPR-TQASINYG- 285
Query: 1073 HPLNPAMSPFINHPAAYTPWPNSPAMNYAHSLN 1171
HPLNPAM+ +YT WP S M YA +LN
Sbjct: 286 HPLNPAMT-----APSYTEWP-SATMTYAQTLN 312
>gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 325
Score = 407 bits (1044), Expect = 3e-111
Identities = 214/258 (82%), Positives = 229/258 (88%), Gaps = 8/258 (3%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFK 562
HRVAQHYGLVTMALDNG GA DGSDNRIL TKT+ESRFP VCLSEIPVKQPE+GRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 563 IAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAP 742
IAIK RPKRGSG GGSGSGVQQNL RSVEERKEEYDKARARIFNSP SSDSEDSSSLR
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLR-- 179
Query: 743 PLPPPPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTS-IAIIRDREKDRYDPDYDRS 919
PP EV+NT +NR+E EVAV+N+ +DA +R+SGRTS +AIIRDREKDRYDPDYDRS
Sbjct: 180 --PPSLEVRNTCINRNETEVAVNNSPVDA--VTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 920 YDRYV-VDPAYRYVRVMP 970
YDRYV V P+ + MP
Sbjct: 236 YDRYVRVMPSGQSFSPMP 253
>gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 324
Score = 406 bits (1043), Expect = 4e-111
Identities = 230/333 (69%), Positives = 258/333 (77%), Gaps = 32/333 (9%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EF P PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 383 HRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE-SGRPEGF 559
HRVAQHYGL T AL+ GG VDGS NRILATKT ESR+P VCLSEIPVKQPE GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 560 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 739
KIAIK RP RG+G GSGSGV++NL RSVEERKEEYDKARARIFNSP SSDSEDSS+ RA
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST-RA 178
Query: 740 PPLPPPPEV---KNTSV-NRSEAEVAVSNNS----LDAGGGSRESGRTS-IAIIRDREKD 892
PP PP P + NT+ +R+E EV V+ NS ++ G R+SGRTS +AIIRDREKD
Sbjct: 179 PP-PPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKD 237
Query: 893 RYDPDYDRSYDRYVVDPAYRYVRVMPSGQSFNPMPLHIPFHDGGFPQMPRGHQAHLNYGH 1072
RYDPDYDR+ RYVRV P Q+FNP+P+ +PFHD FPQMPR QA LNYG
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYG- 285
Query: 1073 HPLNPAMSPFINHPAAYTPWPNSPAMNYAHSLN 1171
HPLNPAM+ +YT WP S M YA +LN
Sbjct: 286 HPLNPAMT-----APSYTEWP-SATMTYAQTLN 312
>gi|224086775|ref|XP_002307959.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 315 bits (807), Expect = 1e-083
Identities = 189/357 (52%), Positives = 231/357 (64%), Gaps = 35/357 (9%)
Frame = +2
Query: 188 TAAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSY 367
T A AA+ EKE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEF FPTSY
Sbjct: 5 TQQAVAAINEKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHFPTSY 64
Query: 368 LRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGR 547
LRLAAHRVA HYGL+TM DNG +DG N+IL KT++SR+P VCL+ IP KQ ES +
Sbjct: 65 LRLAAHRVAHHYGLITMVQDNG---IDGLGNKILVQKTAQSRYPAVCLTAIPAKQLESDK 121
Query: 548 PEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSS 727
PE K+AI+ RP +GS + +G GV++N RSVEERKE+YD+ARARIF+SP S +ED+
Sbjct: 122 PEKIKLAIRPRPNKGSINDPNGFGVKRNPVRSVEERKEDYDRARARIFSSPSSPTAEDT- 180
Query: 728 SLRAPPLPPPPEVKNTSVNRSEAEVAVSNNSL---DAGGGSRESGRTSIAIIRDREKDRY 898
P L P + KN S ++ E E S NS+ + R+S + +AI RDREKDR
Sbjct: 181 ---VPEL--PTDSKNLSSSKDENE--ESRNSVVDPEKNVFIRDSMSSRVAIFRDREKDRT 233
Query: 899 DPDYDRSYDRYVVD-PAYRYVRVMPSGQSFNPMPLHIPF--HDGGFPQMPRGHQAHLNYG 1069
DPDYDRSYDRYV PA + + P FN + PF +D GFPQM + + + G
Sbjct: 234 DPDYDRSYDRYVRSLPANQSFSLTP----FNMQKIPHPFMQYDAGFPQMGQMPRTQASLG 289
Query: 1070 HHP-LNPAMSPF-------INHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASNP 1216
+ P P MSPF + AAY WP S AM YAHS + FRH + P
Sbjct: 290 YQPAAGPVMSPFCALGSNQTSRDAAYVQWP-SAAMMYAHSYEQ-----FRHAAFQAP 340
>gi|224137642|ref|XP_002322608.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 308 bits (788), Expect = 2e-081
Identities = 184/355 (51%), Positives = 230/355 (64%), Gaps = 31/355 (8%)
Frame = +2
Query: 188 TAAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSY 367
T A AA+ EKE+M+DPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEF FPTSY
Sbjct: 5 TPQAVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPTSY 64
Query: 368 LRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGR 547
LRLAAHRVAQHYGL+TM DNG +DG N+IL KT+E R+P V LSEIP KQ S
Sbjct: 65 LRLAAHRVAQHYGLITMVQDNG---IDGLLNKILVQKTAECRYPAVRLSEIPAKQSGSDT 121
Query: 548 PEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSS 727
PE K+AI+ RP +GS + +G G++++ RSVEERKEEYD+ARARIF+SP S ++D+
Sbjct: 122 PEMIKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADDT- 180
Query: 728 SLRAPPLPPPPEVKNTSVNRSE-AEVAVSNNSLDAGGGSRESGRTSIAIIRDREKDRYDP 904
P L P + KN S ++ E E +S + R+ + +AI RDREKDR DP
Sbjct: 181 ---VPQL--PTDSKNLSSSKDENEECRISVVDPEKNVFVRDGMSSRVAIFRDREKDRTDP 235
Query: 905 DYDRSYDRYVVD-PAYRYVRVMPSGQSFNPMPLHIPF--HDGGFPQMPRGHQAHLNYGHH 1075
DYDRSY+RYV PA + + P FN + IP+ +D FPQ+ + + + G+H
Sbjct: 236 DYDRSYERYVRSLPANQSFSLTP----FNMQKIPIPYMQYDPSFPQLGQMPRTQASLGYH 291
Query: 1076 P-LNPAMSPF-------INHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASNP 1216
P NPAMSPF + AAY WP S AM YAHS ++ FRH + P
Sbjct: 292 PAANPAMSPFCAMGSNQTSRDAAYVQWP-STAMMYAHSYDQ-----FRHATFQAP 340
>gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 356
Score = 298 bits (761), Expect = 2e-078
Identities = 178/354 (50%), Positives = 227/354 (64%), Gaps = 32/354 (9%)
Frame = +2
Query: 200 AAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLA 379
+A +KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ QFEF FPTSYLRLA
Sbjct: 11 SATPGDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLA 70
Query: 380 AHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGF 559
AHRVA HYGL TM DN +VDG NRI+ KT+ESR P +CLSEIP KQ E+ +PE
Sbjct: 71 AHRVALHYGLQTMVQDN---SVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHI 127
Query: 560 KIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRA 739
KIAI+ RP + S + + +G++++ R+VEERKEEYDKARARIF++P S DS+D+
Sbjct: 128 KIAIRRRPNKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDT----- 182
Query: 740 PPLP-PPPEVKNTSVNRSEAEVAVSNNSL---DAGGGSRESGRTS-IAIIRDREKDRYDP 904
LP P + KN +N E E NS+ + R+SG +S +AI RDREKDR DP
Sbjct: 183 --LPQAPADGKNLCLNGDENEGC--RNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDP 238
Query: 905 DYDRSYDRYVVD-PAYRYVRVMPSGQSFNPMPLHIPF--HDGGFPQMPRGHQAHLNYGHH 1075
DYDRSY+RYV + P + + P F+ + PF +D GFPQ+ + + + +
Sbjct: 239 DYDRSYERYVRNLPTNQSFSLAP----FDAQKIQHPFLQYDTGFPQLGQIQRTQASLSYR 294
Query: 1076 PLNPAMSPF-------INHPAAYTPWPNSPAMNYAHSLNRPDTNLFRHPSASNP 1216
P NP M+PF + A Y WP S +M YAHS + +F+ P P
Sbjct: 295 PSNPIMNPFCAMGLNQTSRDAVYLQWP-SHSMMYAHSYEQFRHAVFQAPFCQQP 347
>gi|255561144|ref|XP_002521584.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 349
Score = 222 bits (565), Expect = 1e-055
Identities = 130/241 (53%), Positives = 160/241 (66%), Gaps = 12/241 (4%)
Frame = +2
Query: 206 AMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAAH 385
A+T+KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNP Q QFEF FPTSYLRLAAH
Sbjct: 6 AITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAAH 65
Query: 386 RVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFKI 565
RVAQHYGL+TM DN + DG N+IL KT+E R+P V L EIP KQ ES + E KI
Sbjct: 66 RVAQHYGLITMVQDN---SFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKI 122
Query: 566 AIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED----SSSL 733
I+ RP +GS + + GV+Q+ RSVEERKEEYD+ARARIF+SP S++ +D S
Sbjct: 123 VIRPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSID 182
Query: 734 RAPPLPPPPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTSIAIIRDREKDRYDPDYD 913
R P E++N + ++ E ++ G SR + +DR YD YD
Sbjct: 183 RKSTNPSKDELENCRYSANDPEKNINPRD---GAPSRVAIFRDRE--KDRTDPDYDRSYD 237
Query: 914 R 916
R
Sbjct: 238 R 238
>gi|255552461|ref|XP_002517274.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 350
Score = 216 bits (548), Expect = 1e-053
Identities = 114/177 (64%), Positives = 132/177 (74%), Gaps = 3/177 (1%)
Frame = +2
Query: 191 AAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYL 370
+A + EKE+MVDPFLVEAL NP HRLTILRME DIQ+F Q PDQ QFEF FPTSYL
Sbjct: 3 SALNRVINEKESMVDPFLVEALHNPSHRLTILRMEHDIQRFLQIPDQQQFEFQHFPTSYL 62
Query: 371 RLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRP 550
RLAAHRVAQHYGL+TM D G DG N+IL KT+ESR+P VCL EIP KQ E +P
Sbjct: 63 RLAAHRVAQHYGLITMVQDYG---YDGLVNKILVKKTAESRYPAVCLCEIPAKQLERDKP 119
Query: 551 EGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSED 721
E KI I+ RP +GS + + GV+Q+ RSVEERKEEYD+ARARIF+SP S S+D
Sbjct: 120 EQVKIVIRPRPNKGSINECNEFGVKQSPVRSVEERKEEYDRARARIFSSPCSPSSDD 176
>gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana]
Length = 351
Score = 213 bits (541), Expect = 7e-053
Identities = 111/188 (59%), Positives = 137/188 (72%), Gaps = 5/188 (2%)
Frame = +2
Query: 179 SMATAAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFP 358
++ + + A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEF FP
Sbjct: 4 ALTSESGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFP 63
Query: 359 TSYLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE 538
TSYLRLAAHRVA HYGL+T D G DG+++RI+ TK+S+SRFP LSEIPVKQ E
Sbjct: 64 TSYLRLAAHRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSE 120
Query: 539 SGRPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSE 718
+G+ E K+ IK RP +GSG G ++ L +SVEERKE+YD+ARARIFN + D
Sbjct: 121 TGKFEHMKVVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCN 178
Query: 719 DSSSLRAP 742
DSSS P
Sbjct: 179 DSSSETNP 186
>gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 351
Score = 211 bits (537), Expect = 2e-052
Identities = 110/188 (58%), Positives = 136/188 (72%), Gaps = 5/188 (2%)
Frame = +2
Query: 179 SMATAAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFP 358
++ + + A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEF FP
Sbjct: 4 ALTSESGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFP 63
Query: 359 TSYLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE 538
TSYLR AAHRVA HYGL+T D G DG+++RI+ TK+S+SRFP LSEIPVKQ E
Sbjct: 64 TSYLRFAAHRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSE 120
Query: 539 SGRPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSE 718
+G+ E K+ IK RP +GSG G ++ L +SVEERKE+YD+ARARIFN + D
Sbjct: 121 TGKFEHMKVVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCN 178
Query: 719 DSSSLRAP 742
DSSS P
Sbjct: 179 DSSSETNP 186
>gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT_483163
[Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 211 bits (535), Expect = 4e-052
Identities = 111/188 (59%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Frame = +2
Query: 179 SMATAAAAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFP 358
++ + M +K VDPFLVEALQNPRHR TILRMELDIQ+FFQ+PDQ FEF FP
Sbjct: 4 ALTSETGCTVMADKGFTVDPFLVEALQNPRHRPTILRMELDIQRFFQSPDQQLFEFQQFP 63
Query: 359 TSYLRLAAHRVAQHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPE 538
TSYLRLAAHRVA HYGL+T D G DG+ +RI+ TK++ESRFP V LSEIP KQ E
Sbjct: 64 TSYLRLAAHRVANHYGLITSVRD---GGADGNGSRIVVTKSTESRFPAVRLSEIPAKQSE 120
Query: 539 SGRPEGFKIAIKARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSE 718
G+ E K+AIK RP +GSG + L +SVEERKE+YD+ARARIFN D
Sbjct: 121 IGKFEHMKVAIKPRPSKGSGMEAGELEKKGGLPKSVEERKEDYDRARARIFNGLADLDCN 180
Query: 719 DSSSLRAP 742
DSSS P
Sbjct: 181 DSSSETNP 188
>gi|255636099|gb|ACU18394.1| unknown [Glycine max]
Length = 355
Score = 205 bits (519), Expect = 3e-050
Identities = 120/236 (50%), Positives = 149/236 (63%), Gaps = 8/236 (3%)
Frame = +2
Query: 215 EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAAHRVA 394
+KE+MVDPFLVEAL+NPRHR+TILRMELDIQ+F N D FEF FP+SYLRLAAHRVA
Sbjct: 16 DKESMVDPFLVEALENPRHRVTILRMELDIQRFLSNADYQHFEFQHFPSSYLRLAAHRVA 75
Query: 395 QHYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFKIAIK 574
QHYG+ TM DNG +DG RI+ K +ESR+P V LSEIP KQ E+ +PE KIAI+
Sbjct: 76 QHYGMQTMVQDNG---LDGQGTRIMVRKMAESRYPMVRLSEIPAKQLENDKPEKIKIAIR 132
Query: 575 ARPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSLRAPPLPP 754
RP + S + + +G + N RSVEERK EYD+ARARIF+S S DS+D +L
Sbjct: 133 PRPNKISLNEANEAGRKSNPPRSVEERKVEYDRARARIFSSSRSCDSDD--TLSQTSTDE 190
Query: 755 PPEVKNTSVNRSEAEVAVSNNSLDAGGGSRESGRTSIAIIR--DREKDRYDPDYDR 916
+ N N + V + G S R +I R DR YD +Y+R
Sbjct: 191 KNSLINKDENETSKTPVVYSEQCSI-GRDINSTRVAILRDREKDRSDPDYDRNYER 245
>gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding R3H [Medicago
truncatula]
Length = 353
Score = 196 bits (498), Expect = 7e-048
Identities = 108/172 (62%), Positives = 128/172 (74%), Gaps = 4/172 (2%)
Frame = +2
Query: 218 KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAAHRVAQ 397
KE+MVDPFLVEALQNPRHRLTILRMELDIQKF N DQ FEF FP+SYLRLAAHRVAQ
Sbjct: 17 KESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQ 76
Query: 398 HYGLVTMALDNGGGAVDGSDNRILATKTSESRFPCVCLSEIPVKQPESGRPEGFKIAIKA 577
HYG+ TM D G +DG ++IL K ES++P V LSEIP KQ ++ + E KI I++
Sbjct: 77 HYGMQTMVQDIG---LDG-QSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQS 132
Query: 578 RPKRGSGSGGSGSGVQQNLQRSVEERKEEYDKARARIFNSPGSSDSEDSSSL 733
RP + S +G + S + N RSVEERKEEYD+ARARIFN S DS D+SS+
Sbjct: 133 RPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSM 184
>gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 127 bits (317), Expect = 7e-027
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILSMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 383 HRVAQHY 403
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 126 bits (315), Expect = 1e-026
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 383 HRVAQHY 403
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 124 bits (311), Expect = 3e-026
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +2
Query: 203 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFSPFPTSYLRLAA 382
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R A
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFVA 61
Query: 383 HRVAQHY 403
HRVAQHY
Sbjct: 62 HRVAQHY 68
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,628,988,984
Number of Sequences: 15229318
Number of Extensions: 1572628988984
Number of Successful Extensions: 405575147
Number of sequences better than 0.0: 0
|
