BLASTX 7.6.2
Query= UN13276 /QuerySize=1636
(1635 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear r... 636 2e-182
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 426 2e-119
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 246 4e-065
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 246 4e-065
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 246 4e-065
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 238 1e-062
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 238 1e-062
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 235 8e-062
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 235 8e-062
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 207 2e-053
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 207 2e-053
TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARA... 186 4e-047
TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear r... 117 2e-026
TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (... 97 2e-020
>TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr2:14156085-14157435
FORWARD
Length = 405
Score = 636 bits (1638), Expect = 2e-182
Identities = 336/415 (80%), Positives = 345/415 (83%), Gaps = 25/415 (6%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
MESDQGKLFIGGISW+TDENLLREYFSNFGEV QVTVMR+KATGRPRGFGFVAFSDPAVI
Sbjct: 1 MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
DRVLQDKHHIDNRDVDVKRAMSR+EQSPAGR G+FN +R+FDS GANVRTKKIFVGGL
Sbjct: 61 DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDS---GANVRTKKIFVGGL 117
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
PPALTSDEFRAYFETYGPVSDAVIMIDQ TQRPRGFGFVSFDSEDSVDLVLHKTFHDL+G
Sbjct: 118 PPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNG 177
Query: 944 KQVEVKRALPKDANPGIASGGGWWSW**LWFPGI---WWKWLRGSC*FQ*IYAASNAGSG 774
KQVEVKRALPKDANPGIASGGG S FPG G N GSG
Sbjct: 178 KQVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGGSGYEGRVDSNRYMQPQNTGSG 237
Query: 773 YPPYGAASGYGTGYGYGSNGVGYGGFGGYGNPSGAPYGNPGGPGAGFGSGPRPSWEGQAP 594
YPPYG SGYGTGYGYGSNGVGYGGFGGYGNP+GAPYGNP PGAGFGSGPR SW QAP
Sbjct: 238 YPPYG-GSGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNPSVPGAGFGSGPRSSWGAQAP 296
Query: 593 SGYGNNVGYGNAAAAPAPWGGSGS-GSAVMGQGGAASAGYGSQGYGYGGNDSSYGAQPGY 417
SGYG NVGYGNA APWGGSG GSAVMGQ G ASAGYGSQGYGYGGNDSSYG Y
Sbjct: 297 SGYG-NVGYGNA----APWGGSGGPGSAVMGQAG-ASAGYGSQGYGYGGNDSSYGTPSAY 350
Query: 416 GAVGGR----PNSH-GGGYADVPD---GYGNHQG-NGQAGYGGGY--GRQAQQQ* 285
GAVGGR PN+H GGGYAD D GYGNHQG NGQAGYGGGY GRQAQQQ*
Sbjct: 351 GAVGGRSGNMPNNHGGGGYADALDGSGGYGNHQGNNGQAGYGGGYGSGRQAQQQ* 405
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 426 bits (1095), Expect = 2e-119
Identities = 243/423 (57%), Positives = 279/423 (65%), Gaps = 38/423 (8%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
M+SDQGKLF+GGISWETDE+ LRE+F+N+GEVSQ VMRDK TGRPRGFGFV FSDP+V+
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
DRVLQ+KH ID R+VDVKRAMSR+EQ +GR G+ N +R S GG A +TKKIFVGGL
Sbjct: 61 DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSR---SSGGDAYNKTKKIFVGGL 117
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
PP LT +EFR YFE YGPV+D IM DQAT RPRGFGFVSFDSED+VD VLHKTFHDLSG
Sbjct: 118 PPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSG 177
Query: 944 KQVEVKRALPKDANPGIA--SGGGWWSW**LWFPGIWWKWLRGSC*FQ*IYAASNAGSGY 771
KQVEVKRALPKDANPG S GG S + G + G + G+G
Sbjct: 178 KQVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSY-DGRMDSNRFLQHQSVGNGL 236
Query: 770 PPYGAASGYGTGYGYGSNGVGYGGFGGYGNPSG-------APYGNPGGPGAGFGS----G 624
P YG +SGYG GYG GSNG GYG +GGY +G A YG PGAG+GS
Sbjct: 237 PSYG-SSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVA 295
Query: 623 PRPSWEGQAPSGYGNNVGYGNAAAAPAPWGGSGSGSAVMGQGGAASAGYGSQGYGYG--- 453
PR SW+ A SGYG N GYG+ AA SG G + +GY +QGYGYG
Sbjct: 296 PRNSWDTPASSGYG-NPGYGSGAA------HSGYGVPGAAPPTQSPSGYSNQGYGYGGYS 348
Query: 452 GNDSSYGAQPGYGAVGGRPNSHG------GGYADVPDGYGNHQGNGQAGYGGGY----GR 303
G+DS YG Q YG VGGRP+ G GGY G G+ + + GYGGGY GR
Sbjct: 349 GSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQGYGGGYNDGQGR 408
Query: 302 QAQ 294
Q Q
Sbjct: 409 QGQ 411
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 246 bits (627), Expect = 4e-065
Identities = 121/212 (57%), Positives = 155/212 (73%), Gaps = 13/212 (6%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
MESD GKLFIGGISW+TDE LR+YFSN+G+V + +MRD+ATGR RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+RV+ DKH ID R V+ K+A+ RD+Q R S S GGGG RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG---RTKKIFVGGL 117
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 944 KQVEVKRALPKDANP----------GIASGGG 879
K VEVKRA+PK+ +P G+ GGG
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGG 209
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 246 bits (627), Expect = 4e-065
Identities = 121/212 (57%), Positives = 155/212 (73%), Gaps = 13/212 (6%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
MESD GKLFIGGISW+TDE LR+YFSN+G+V + +MRD+ATGR RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+RV+ DKH ID R V+ K+A+ RD+Q R S S GGGG RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG---RTKKIFVGGL 117
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 944 KQVEVKRALPKDANP----------GIASGGG 879
K VEVKRA+PK+ +P G+ GGG
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGG 209
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 246 bits (627), Expect = 4e-065
Identities = 121/212 (57%), Positives = 155/212 (73%), Gaps = 13/212 (6%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
MESD GKLFIGGISW+TDE LR+YFSN+G+V + +MRD+ATGR RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+RV+ DKH ID R V+ K+A+ RD+Q R S S GGGG RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG---RTKKIFVGGL 117
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 944 KQVEVKRALPKDANP----------GIASGGG 879
K VEVKRA+PK+ +P G+ GGG
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGG 209
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 238 bits (606), Expect = 1e-062
Identities = 110/190 (57%), Positives = 143/190 (75%)
Frame = -2
Query: 1478 SDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVIDR 1299
SD GKLFIGGISW+TDE L+EYF +G++ + +MRD+ TGR RGFGF+ F+DP+V +R
Sbjct: 12 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
Query: 1298 VLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGLPP 1119
V+ DKH ID R V+ K+A+ RD+Q R S S GG G RTKKIFVGGLP
Sbjct: 72 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131
Query: 1118 ALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQ 939
++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+GK
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191
Query: 938 VEVKRALPKD 909
VEVKRA+PK+
Sbjct: 192 VEVKRAVPKE 201
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 238 bits (606), Expect = 1e-062
Identities = 110/190 (57%), Positives = 143/190 (75%)
Frame = -2
Query: 1478 SDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVIDR 1299
SD GKLFIGGISW+TDE L+EYF +G++ + +MRD+ TGR RGFGF+ F+DP+V +R
Sbjct: 9 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68
Query: 1298 VLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGLPP 1119
V+ DKH ID R V+ K+A+ RD+Q R S S GG G RTKKIFVGGLP
Sbjct: 69 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128
Query: 1118 ALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQ 939
++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+GK
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188
Query: 938 VEVKRALPKD 909
VEVKRA+PK+
Sbjct: 189 VEVKRAVPKE 198
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 235 bits (598), Expect = 8e-062
Identities = 134/311 (43%), Positives = 188/311 (60%), Gaps = 17/311 (5%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
M+SD GKLFIGGISW+T+E L+EYFS+FGEV + +++D+ TGR RGFGFV F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+ V+ +KH+ID R V+ K+A+ RD+Q+ R N S G G RT+KIFVGGL
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-----SNSSSIQGSPGGPGRTRKIFVGGL 115
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
P ++T +F+ YFE +G +D V+M D TQRPRGFGF+++DSE++V+ VL KTFH+L+G
Sbjct: 116 PSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNG 175
Query: 944 KQVEVKRALPKDANPGIASG--GGWWSW**LWFPGIWWKWLRGSC*FQ*IYAASNAGSGY 771
K VEVKRA+PK+ +PG + G +S+ + + +G A+ G G
Sbjct: 176 KMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQG------FNPAAVGGYGL 229
Query: 770 PPYGAASGYGTG-YGYGSNGVGYGGFGGY--GNPSGAPYGNPGGPGAGFGSGPRPSWEGQ 600
G S G G G+ + GYG + G P+G G +G G P + G
Sbjct: 230 RMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGN 289
Query: 599 APSGYGNNVGY 567
+ +G VGY
Sbjct: 290 T-NRFGPAVGY 299
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 235 bits (598), Expect = 8e-062
Identities = 134/311 (43%), Positives = 188/311 (60%), Gaps = 17/311 (5%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
M+SD GKLFIGGISW+T+E L+EYFS+FGEV + +++D+ TGR RGFGFV F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+ V+ +KH+ID R V+ K+A+ RD+Q+ R N S G G RT+KIFVGGL
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQNMVNR-----SNSSSIQGSPGGPGRTRKIFVGGL 115
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
P ++T +F+ YFE +G +D V+M D TQRPRGFGF+++DSE++V+ VL KTFH+L+G
Sbjct: 116 PSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNG 175
Query: 944 KQVEVKRALPKDANPGIASG--GGWWSW**LWFPGIWWKWLRGSC*FQ*IYAASNAGSGY 771
K VEVKRA+PK+ +PG + G +S+ + + +G A+ G G
Sbjct: 176 KMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQG------FNPAAVGGYGL 229
Query: 770 PPYGAASGYGTG-YGYGSNGVGYGGFGGY--GNPSGAPYGNPGGPGAGFGSGPRPSWEGQ 600
G S G G G+ + GYG + G P+G G +G G P + G
Sbjct: 230 RMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGN 289
Query: 599 APSGYGNNVGY 567
+ +G VGY
Sbjct: 290 T-NRFGPAVGY 299
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 207 bits (525), Expect = 2e-053
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 7/192 (3%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
ME + KLFIGGISWET E+ LR+YF +FGEV + +M+D+ATGR RGFGFV F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+RV+ KH ID + V+ K+A+ RD+ FN + S G G + +KKIFVGGL
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDDHV------VFNKSNSSLQGSPGPS-NSKKIFVGGL 113
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
++T EF+ YF +G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+G
Sbjct: 114 ASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNG 173
Query: 944 KQVEVKRALPKD 909
K VEVK A+PKD
Sbjct: 174 KMVEVKLAVPKD 185
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 207 bits (525), Expect = 2e-053
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 7/192 (3%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
ME + KLFIGGISWET E+ LR+YF +FGEV + +M+D+ATGR RGFGFV F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGL 1125
+RV+ KH ID + V+ K+A+ RD+ FN + S G G + +KKIFVGGL
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDDHV------VFNKSNSSLQGSPGPS-NSKKIFVGGL 113
Query: 1124 PPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 945
++T EF+ YF +G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+G
Sbjct: 114 ASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNG 173
Query: 944 KQVEVKRALPKD 909
K VEVK A+PKD
Sbjct: 174 KMVEVKLAVPKD 185
>TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARABIDOPSIS
THALIANA RNA-BINDING PROTEIN 1); RNA binding / single-stranded RNA
binding | chr1:21727374-21728539 FORWARD
Length = 361
Score = 186 bits (471), Expect = 4e-047
Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Frame = -2
Query: 1484 MESDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVI 1305
M+ D+ KLF+GGI+ ET E L++YFS +G V + V ++K TG+PRGFGFV F++ +
Sbjct: 1 MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60
Query: 1304 DRVLQDKHHIDNRDVDVKRAMSRDE--QSPAGRQ------GSFNGNRSFDSGGGGANVRT 1149
+ L+D H I + VDV++A+ + E Q P Q NG + G RT
Sbjct: 61 VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLR-EMSSNGVTSRT 119
Query: 1148 KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLH 969
KKIFVGGL T +EF++YFE +G +D V+M D T RPRGFGFV++DSEDSV++V+
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQ 179
Query: 968 KTFHDLSGKQVEVKRALPKDANPGIASGGG 879
FH+LS K+VEVKRA+PK+ GI S G
Sbjct: 180 SNFHELSDKRVEVKRAIPKE---GIQSNNG 206
>TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304106
REVERSE
Length = 372
Score = 117 bits (292), Expect = 2e-026
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 7/118 (5%)
Frame = -2
Query: 1262 VDVKRAMSRDEQSPAGRQGSFNGNRSFDSGGGGANVRTKKIFVGGLPPALTSDEFRAYFE 1083
V+ K+A+ RD+ FN + S G G + +KKIFVGGL ++T EF+ YF
Sbjct: 15 VEAKKAVPRDDHV------VFNKSNSSLQGSPGPS-NSKKIFVGGLASSVTEAEFKKYFA 67
Query: 1082 TYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKD 909
+G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+GK VEVK A+PKD
Sbjct: 68 QFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKD 125
>TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:6067394-6069098 REVERSE
Length = 370
Score = 97 bits (241), Expect = 2e-020
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = -2
Query: 1478 SDQGKLFIGGISWETDENLLREYFSNFGEVSQVTVMRDKATGRPRGFGFVAFSDPAVIDR 1299
S GKLF+GG+SWET YF FGEV +M D+ TG PRGFGFV F+D AV ++
Sbjct: 63 SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122
Query: 1298 VLQDKHHIDNRDVDVKRAMSRDEQ 1227
VL++ H ID+R VD+KR + R ++
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDK 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,031,614,975
Number of Sequences: 33410
Number of Extensions: 7031614975
Number of Successful Extensions: 243238164
Number of sequences better than 0.0: 0
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