BLASTX 7.6.2
Query= UN13337 /QuerySize=1455
(1454 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13300.1 | Symbols: VCS | VCS (VARICOSE); nucl... 602 2e-172
TAIR9_protein||AT3G13300.2 | Symbols: VCS | VCS (VARICOSE); nucl... 602 2e-172
TAIR9_protein||AT3G13290.1 | Symbols: VCR | VCR (VARICOSE-RELATE... 533 1e-151
>TAIR9_protein||AT3G13300.1 | Symbols: VCS | VCS (VARICOSE); nucleotide binding
/ protein homodimerization | chr3:4304085-4309949 FORWARD
Length = 1345
Score = 602 bits (1552), Expect = 2e-172
Identities = 310/375 (82%), Positives = 338/375 (90%), Gaps = 3/375 (0%)
Frame = -2
Query: 1450 KSNADALWARLQEEIVKNEKAMRDHSQQIVNAVTNFVSKELNAMCEKTI-KEFATIVPAI 1274
KSNADALWAR+QEE VKNEKA+RDH+QQIVNA TNF+SKELNAM EKTI KE A I PA+
Sbjct: 971 KSNADALWARIQEETVKNEKALRDHAQQIVNATTNFMSKELNAMFEKTIKKELAAIGPAL 1030
Query: 1273 ARALVPAIEKTVTSSITESFQRALSDKAVNHLDKSVNSKLEATIMKQFQTQFQTSGRQAL 1094
AR++VP IEKTV+S+ITESFQR + DKAVN LDKSVN KLEAT+ +Q Q QFQTSG+QAL
Sbjct: 1031 ARSVVPVIEKTVSSAITESFQRGIGDKAVNQLDKSVNIKLEATVARQIQAQFQTSGKQAL 1090
Query: 1093 QEALRSGLEASVIPSFERSCKTMFEQVDTAFQKGMAEHTNAAQQRFDGGHSPLAHTLKET 914
QE LRS +E+SVIPSFE++CK MF+Q+D+AFQKG+AEHTNAAQQRFD GHS LAHTLKE+
Sbjct: 1091 QEGLRSSVESSVIPSFEKACKAMFDQIDSAFQKGIAEHTNAAQQRFDSGHSQLAHTLKES 1150
Query: 913 ITSATSVTQALSRELAESQRNRLALAAAGANSSGSNALVSQRSSGPLGAILEKVEA--DP 740
ITSA+SV QALSRELAE+QRN LALAAAGANS GSN+LV+Q S GPLGA+LEKVEA DP
Sbjct: 1151 ITSASSVAQALSRELAETQRNLLALAAAGANSGGSNSLVTQLSGGPLGALLEKVEAPMDP 1210
Query: 739 IAELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 560
ELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ
Sbjct: 1211 TTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 1270
Query: 559 LACDISKDTSRKLAWMTDVVTAINPSDPMVAAHGRPIFEQVYQILHHHRNVPGSDVSATR 380
LACDISKDTSRKLAWMTDVV AINPSD M+A H RPIFEQVYQILHHHRN PGSDVSA R
Sbjct: 1271 LACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAPGSDVSAIR 1330
Query: 379 LIMHVINSMLMACK* 335
LIMHVINSMLM CK*
Sbjct: 1331 LIMHVINSMLMGCK* 1345
>TAIR9_protein||AT3G13300.2 | Symbols: VCS | VCS (VARICOSE); nucleotide binding
/ protein homodimerization | chr3:4304085-4309949 FORWARD
Length = 1310
Score = 602 bits (1552), Expect = 2e-172
Identities = 310/375 (82%), Positives = 338/375 (90%), Gaps = 3/375 (0%)
Frame = -2
Query: 1450 KSNADALWARLQEEIVKNEKAMRDHSQQIVNAVTNFVSKELNAMCEKTI-KEFATIVPAI 1274
KSNADALWAR+QEE VKNEKA+RDH+QQIVNA TNF+SKELNAM EKTI KE A I PA+
Sbjct: 936 KSNADALWARIQEETVKNEKALRDHAQQIVNATTNFMSKELNAMFEKTIKKELAAIGPAL 995
Query: 1273 ARALVPAIEKTVTSSITESFQRALSDKAVNHLDKSVNSKLEATIMKQFQTQFQTSGRQAL 1094
AR++VP IEKTV+S+ITESFQR + DKAVN LDKSVN KLEAT+ +Q Q QFQTSG+QAL
Sbjct: 996 ARSVVPVIEKTVSSAITESFQRGIGDKAVNQLDKSVNIKLEATVARQIQAQFQTSGKQAL 1055
Query: 1093 QEALRSGLEASVIPSFERSCKTMFEQVDTAFQKGMAEHTNAAQQRFDGGHSPLAHTLKET 914
QE LRS +E+SVIPSFE++CK MF+Q+D+AFQKG+AEHTNAAQQRFD GHS LAHTLKE+
Sbjct: 1056 QEGLRSSVESSVIPSFEKACKAMFDQIDSAFQKGIAEHTNAAQQRFDSGHSQLAHTLKES 1115
Query: 913 ITSATSVTQALSRELAESQRNRLALAAAGANSSGSNALVSQRSSGPLGAILEKVEA--DP 740
ITSA+SV QALSRELAE+QRN LALAAAGANS GSN+LV+Q S GPLGA+LEKVEA DP
Sbjct: 1116 ITSASSVAQALSRELAETQRNLLALAAAGANSGGSNSLVTQLSGGPLGALLEKVEAPMDP 1175
Query: 739 IAELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 560
ELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ
Sbjct: 1176 TTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 1235
Query: 559 LACDISKDTSRKLAWMTDVVTAINPSDPMVAAHGRPIFEQVYQILHHHRNVPGSDVSATR 380
LACDISKDTSRKLAWMTDVV AINPSD M+A H RPIFEQVYQILHHHRN PGSDVSA R
Sbjct: 1236 LACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQVYQILHHHRNAPGSDVSAIR 1295
Query: 379 LIMHVINSMLMACK* 335
LIMHVINSMLM CK*
Sbjct: 1296 LIMHVINSMLMGCK* 1310
>TAIR9_protein||AT3G13290.1 | Symbols: VCR | VCR (VARICOSE-RELATED); nucleotide
binding | chr3:4297529-4303113 FORWARD
Length = 1323
Score = 533 bits (1373), Expect = 1e-151
Identities = 282/375 (75%), Positives = 310/375 (82%), Gaps = 26/375 (6%)
Frame = -2
Query: 1450 KSNADALWARLQEEIVKNEKAMRDHSQQIVNAVTNFVSKELNAMCEKTI-KEFATIVPAI 1274
KSNADALWA QEE VKNEKA+RDH QQI+N TNF SKELNAM EKT+ KEFA++ P +
Sbjct: 972 KSNADALWAHFQEEAVKNEKALRDHGQQIMNETTNFTSKELNAMFEKTMKKEFASVGPTL 1031
Query: 1273 ARALVPAIEKTVTSSITESFQRALSDKAVNHLDKSVNSKLEATIMKQFQTQFQTSGRQAL 1094
AR + P IEKTV+S+ITESFQR + DKAVN L+KSVNSKLE T+ +Q Q QFQTSGRQ L
Sbjct: 1032 ARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKSVNSKLETTVARQIQAQFQTSGRQVL 1091
Query: 1093 QEALRSGLEASVIPSFERSCKTMFEQVDTAFQKGMAEHTNAAQQRFDGGHSPLAHTLKET 914
QE LRS +E+SVIPSFERSCKTMFEQVD+ QKG+ +HT+ ET
Sbjct: 1092 QEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGIGKHTS------------------ET 1133
Query: 913 ITSATSVTQALSRELAESQRNRLALAAAGANSSGSNALVSQRSSGPLGAILEKVEA--DP 740
I+SA+SVTQAL+RELAESQRNRLAL AA GSN LV+Q S+GPLGA+LEKVEA DP
Sbjct: 1134 ISSASSVTQALNRELAESQRNRLALTAA-----GSNPLVTQLSNGPLGALLEKVEAPMDP 1188
Query: 739 IAELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 560
ELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ
Sbjct: 1189 TTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQ 1248
Query: 559 LACDISKDTSRKLAWMTDVVTAINPSDPMVAAHGRPIFEQVYQILHHHRNVPGSDVSATR 380
LACDIS DTSRKL WMTDVVTAINPSD M+A H RPIFEQVYQILHHHRN PGSDVSA R
Sbjct: 1249 LACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAPGSDVSAVR 1308
Query: 379 LIMHVINSMLMACK* 335
LIMHVINS+LM+CK*
Sbjct: 1309 LIMHVINSLLMSCK* 1323
Score = 317 bits (810), Expect = 2e-086
Identities = 172/220 (78%), Positives = 185/220 (84%), Gaps = 13/220 (5%)
Frame = -2
Query: 997 KGMAEHTNAAQQRFDGGHSPLAHTLKETITSATSVTQALSRELAESQRNRLALAAAGANS 818
K M E ++ Q+ G H+ ETI+SA+SVTQAL+RELAESQRNRLAL AA
Sbjct: 1112 KTMFEQVDSTLQKGIGKHT------SETISSASSVTQALNRELAESQRNRLALTAA---- 1161
Query: 817 SGSNALVSQRSSGPLGAILEKVEA--DPIAELSRLISERKYEESFTSALQRSDVSIVSWL 644
GSN LV+Q S+GPLGA+LEKVEA DP ELSRLISERKYEESFTSALQRSDVSIVSWL
Sbjct: 1162 -GSNPLVTQLSNGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWL 1220
Query: 643 CSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDISKDTSRKLAWMTDVVTAINPSDPMVAA 464
CSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDIS DTSRKL WMTDVVTAINPSD M+A
Sbjct: 1221 CSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAV 1280
Query: 463 HGRPIFEQVYQILHHHRNVPGSDVSATRLIMHVINSMLMA 344
H RPIFEQVYQILHHHRN PGSDVSA RLIMHVINS+LM+
Sbjct: 1281 HARPIFEQVYQILHHHRNAPGSDVSAVRLIMHVINSLLMS 1320
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,031,614,975
Number of Sequences: 33410
Number of Extensions: 7031614975
Number of Successful Extensions: 243238164
Number of sequences better than 0.0: 0
|
