BLASTX 7.6.2

Query= UN13346 /QuerySize=1043
        (1042 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein ...     55   1e-006
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ...     54   1e-006
sp|Q9P785|YNY5_SCHPO LisH domain-containing protein C1711.05 OS=...     54   2e-006
sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces ...     52   5e-006

>sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein 2 OS=Mus
        musculus GN=Srrm2 PE=1 SV=2

          Length = 2703

 Score =  55 bits (130), Expect = 1e-006
 Identities = 37/132 (28%), Positives = 60/132 (45%)
 Frame = -3

Query:  845 GSTEEEATRIVKETDEQRIEITDSSHDHDKSSSSNSSSGSGSGSSSSDDDESHEVKEETE 666
            G+ +      ++   E+R   + SS     SSSS+SSS S S  SSS D E   +  + E
Sbjct: 2468 GAQQPSTLAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPE 2527

Query:  665 VIITVPSQPVPVAGDAHFIGSTANAIVENAGLMDSTTPSDPETENIVVTSSAAEASLASD 486
            V +     P PV  +A   G              S++ S   + +   +SS++ +S +S 
Sbjct: 2528 VALKRVPSPTPVPKEAIREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS 2587

Query:  485 ESKQASSSTTGS 450
             S  +SSS++ S
Sbjct: 2588 SSSSSSSSSSSS 2599

>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo
        sapiens GN=SRRM2 PE=1 SV=2

          Length = 2752

 Score =  54 bits (129), Expect = 1e-006
 Identities = 37/132 (28%), Positives = 60/132 (45%)
 Frame = -3

Query:  845 GSTEEEATRIVKETDEQRIEITDSSHDHDKSSSSNSSSGSGSGSSSSDDDESHEVKEETE 666
            G+ +  A   ++   E+R   + SS     SSSS+SSS S S  SSS D E   +  + E
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE 2573

Query:  665 VIITVPSQPVPVAGDAHFIGSTANAIVENAGLMDSTTPSDPETENIVVTSSAAEASLASD 486
            V +     P P   +A   G              S++ S   + +   +SS++ +S +S 
Sbjct: 2574 VALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS 2633

Query:  485 ESKQASSSTTGS 450
             S  +SSS++ S
Sbjct: 2634 SSSSSSSSSSSS 2645

>sp|Q9P785|YNY5_SCHPO LisH domain-containing protein C1711.05
        OS=Schizosaccharomyces pombe GN=SPBC1711.05 PE=2 SV=1

          Length = 451

 Score =  54 bits (127), Expect = 2e-006
 Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
 Frame = -3

Query: 965 SPTKKKKPNQSIMPSGAKKRKAAKKKQQQEASSTLKSINHGSTEEEATRIVKETDEQRIE 786
           +P +K   +     SG+   ++     + E+SS     +  S++ E+    +++D     
Sbjct:  91 APPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSS 150

Query: 785 ITDSSHDHDKSSSSNSSSGSGSGSSSSDDDESHEVKEETEVIITVPSQPVPVAGDAHFIG 606
               S    + S S+SSS S    SSS+D++S     ++E      S+      D+    
Sbjct: 151 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSE------SESSSEDSDSSSSS 204

Query: 605 STANAIVENAGLMDSTTPSDPETE-----NIVVTSSAAEASLASDESKQASSSTTGSDKK 441
           S + +   + G   S++ S  E+E     N   +SS+   S +S E   +SSS++ S+ +
Sbjct: 205 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 264

Query: 440 ELKKCVPEGSKES 402
              K     S  S
Sbjct: 265 SSSKDSDSSSNSS 277

>sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces cerevisiae
        GN=SRP40 PE=1 SV=2

          Length = 406

 Score =  52 bits (124), Expect = 5e-006
 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
 Frame = -3

Query: 965 SPTKKKKPNQSIMPSGAKKRKAAKKKQQQEASSTLKSINHGSTEEEATRIVKETDEQRIE 786
           S +     + S   S ++   ++       +SS+ +S +   +E+E  +  +E+D +  +
Sbjct:  80 SSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAK 139

Query: 785 ITDSSHDHDKSSSSNSSSGSGSGSSSSDDDESHEVKEETEVIITVPSQPVPVAGDAHFIG 606
            T  +    +SSSS+ SS SGS SSS  +  S    + +    +  S       D+    
Sbjct: 140 ETKKAKTEPESSSSSESSSSGSSSSSESESGSESDSDSS----SSSSSSSDSESDSESDS 195

Query: 605 STANAIVENAGLMDSTTPSDPETENIVVTSSAAEASLASDESKQASSSTTGSDKKELKKC 426
            ++++   +    DS + S   + +   +SS++ +S  SD    +SS +  S   +    
Sbjct: 196 QSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSS 255

Query: 425 VPEGSKES 402
               S ES
Sbjct: 256 SDSSSDES 263


 Score =  52 bits (123), Expect = 6e-006
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
 Frame = -3

Query: 983 SCTVHRSPTKKKKPNQSIMPSGAKKRKAAKKKQQQEASSTLKSINHGSTEEEATRIVKET 804
           S +   S  + KK  +      AK+ K AK + +  +SS   S    S+ E  +    ++
Sbjct: 116 SSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSESDS 175

Query: 803 DEQRIEITDSSHDHDKSSSSNSSSGSGSGSSSSD-DDESHEVKEETEVIITVPSQPVPVA 627
           D      + S  + D  S S SSS S S  SSSD D  S +   +++   +  S      
Sbjct: 176 DSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSD 235

Query: 626 GDAHFIGSTANAIVENAGLMDSTTPSDPET-ENIVVTSSAAEASLASDESKQASSSTTGS 450
            D     S +++  +++G  DS++ SD  + E+    SS +++   S  S +  +    +
Sbjct: 236 SD-----SDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETKEATA 290

Query: 449 DKKELKKCVPEGSKES 402
           D+ + ++  P  S ES
Sbjct: 291 DESKAEE-TPASSNES 305

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0