BLASTX 7.6.2
Query= UN13378 /QuerySize=1769
(1768 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78770.1 | Symbols: APC6 | cell division cycle... 465 7e-131
TAIR9_protein||AT1G78780.2 | Symbols: | pathogenesis-related fa... 456 2e-128
TAIR9_protein||AT1G78780.4 | Symbols: | pathogenesis-related fa... 445 7e-125
TAIR9_protein||AT1G78780.1 | Symbols: | pathogenesis-related fa... 344 1e-094
TAIR9_protein||AT1G78780.3 | Symbols: | pathogenesis-related fa... 344 1e-094
>TAIR9_protein||AT1G78770.1 | Symbols: APC6 | cell division cycle family protein
| chr1:29617421-29621273 FORWARD
Length = 544
Score = 465 bits (1194), Expect = 7e-131
Identities = 225/238 (94%), Positives = 228/238 (95%)
Frame = -3
Query: 1688 SKALSWFAVGCYYYSIKKYAEARRYFSKATNIDGSFSPAWIGYGNSFASQEEGDQAMSAY 1509
SKALSWFAVGCYYY IKKYAEARRYFSKAT IDGSFSPA IGYGNSFA+QEEGDQAMSAY
Sbjct: 307 SKALSWFAVGCYYYCIKKYAEARRYFSKATGIDGSFSPARIGYGNSFAAQEEGDQAMSAY 366
Query: 1508 RTAARLFPGCHLPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMEE 1329
RTAARLFPGCHLPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHM+E
Sbjct: 367 RTAARLFPGCHLPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKE 426
Query: 1328 YGKAVRWFEKTLAHIPSVLTEIWEATVVNLAHAYRKLRKYREAISYYERALTLSTKSLST 1149
YGKAVRWFEKTLAHIPS LTE WE TVVNLAHAYRKLRK REAISYYERALTLSTKSLST
Sbjct: 427 YGKAVRWFEKTLAHIPSALTESWEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLST 486
Query: 1148 YSGLAYTYHLQGNFSAAISHYHKALWLKPDDQFCTEMLNVALMDECQTGVDSTVELC* 975
YSGLAYTYHLQGNFSAAIS+YHKALWLKPDDQFCTEMLNVALMDECQ GVDS VELC*
Sbjct: 487 YSGLAYTYHLQGNFSAAISYYHKALWLKPDDQFCTEMLNVALMDECQNGVDSKVELC* 544
Score = 59 bits (140), Expect = 1e-008
Identities = 27/28 (96%)
Frame = -2
Query: 1767 HLAAAMELGNSNELYLMACNLVKDYPFK 1684
HLAAAMELGNSNELYLMACNLVKDYP K
Sbjct: 281 HLAAAMELGNSNELYLMACNLVKDYPSK 308
>TAIR9_protein||AT1G78780.2 | Symbols: | pathogenesis-related family protein |
chr1:29621447-29622431 REVERSE
Length = 239
Score = 456 bits (1172), Expect = 2e-128
Identities = 221/239 (92%), Positives = 226/239 (94%)
Frame = +2
Query: 38 MATREERDKYRSVLNDVGDVQWRYGHPPAFDLVNQLFEEGQTKVWPEGSLEETVQNAIKS 217
MATREERDKYRSVL D G VQWRY +PP F+ VNQLFEEGQTKVWPEGSLEETVQNAIKS
Sbjct: 1 MATREERDKYRSVLEDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKS 60
Query: 218 WEMELSHKIRLQDFKTINPDKFKLFVNGREGLSAEETLRLGSYNALLKTSLPGEFQYYKP 397
WEME SHKIRLQDFKTINP+KFKLFVNGREGLSAEETLRLGSYNALLK SLP EFQYYKP
Sbjct: 61 WEMEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKP 120
Query: 398 EEESFESSHDAFRSALPRGFAFEILSVYSGPPNIAFKFRHWGYFEGNFKGHAPTGEMVQF 577
EEESFESSHDAFRSALPRGFA+EILSVYSGPP IAFKFRHWGYFEG FKGHAPTGEMVQF
Sbjct: 121 EEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQF 180
Query: 578 LGLGVLKVDELLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDSTAEKQSCPFTH* 754
LGLGVLKVDE LRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGD+TAEKQSCPFTH*
Sbjct: 181 LGLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCPFTH* 239
>TAIR9_protein||AT1G78780.4 | Symbols: | pathogenesis-related family protein |
chr1:29621447-29622431 REVERSE
Length = 236
Score = 445 bits (1142), Expect = 7e-125
Identities = 218/239 (91%), Positives = 223/239 (93%), Gaps = 3/239 (1%)
Frame = +2
Query: 38 MATREERDKYRSVLNDVGDVQWRYGHPPAFDLVNQLFEEGQTKVWPEGSLEETVQNAIKS 217
MATREERDKYRSVL D G VQWRY +PP F+ VNQLFEEGQTKVWPEGSLEETVQNAIKS
Sbjct: 1 MATREERDKYRSVLEDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKS 60
Query: 218 WEMELSHKIRLQDFKTINPDKFKLFVNGREGLSAEETLRLGSYNALLKTSLPGEFQYYKP 397
WEME SHKIRLQDFKTINP+KFKLFVN GLSAEETLRLGSYNALLK SLP EFQYYKP
Sbjct: 61 WEMEFSHKIRLQDFKTINPEKFKLFVN---GLSAEETLRLGSYNALLKNSLPEEFQYYKP 117
Query: 398 EEESFESSHDAFRSALPRGFAFEILSVYSGPPNIAFKFRHWGYFEGNFKGHAPTGEMVQF 577
EEESFESSHDAFRSALPRGFA+EILSVYSGPP IAFKFRHWGYFEG FKGHAPTGEMVQF
Sbjct: 118 EEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQF 177
Query: 578 LGLGVLKVDELLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDSTAEKQSCPFTH* 754
LGLGVLKVDE LRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGD+TAEKQSCPFTH*
Sbjct: 178 LGLGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCPFTH* 236
>TAIR9_protein||AT1G78780.1 | Symbols: | pathogenesis-related family protein |
chr1:29621447-29622153 REVERSE
Length = 177
Score = 344 bits (882), Expect = 1e-094
Identities = 167/177 (94%), Positives = 170/177 (96%)
Frame = +2
Query: 224 MELSHKIRLQDFKTINPDKFKLFVNGREGLSAEETLRLGSYNALLKTSLPGEFQYYKPEE 403
ME SHKIRLQDFKTINP+KFKLFVNGREGLSAEETLRLGSYNALLK SLP EFQYYKPEE
Sbjct: 1 MEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEE 60
Query: 404 ESFESSHDAFRSALPRGFAFEILSVYSGPPNIAFKFRHWGYFEGNFKGHAPTGEMVQFLG 583
ESFESSHDAFRSALPRGFA+EILSVYSGPP IAFKFRHWGYFEG FKGHAPTGEMVQFLG
Sbjct: 61 ESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLG 120
Query: 584 LGVLKVDELLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDSTAEKQSCPFTH* 754
LGVLKVDE LRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGD+TAEKQSCPFTH*
Sbjct: 121 LGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCPFTH* 177
>TAIR9_protein||AT1G78780.3 | Symbols: | pathogenesis-related family protein |
chr1:29621447-29622153 REVERSE
Length = 177
Score = 344 bits (882), Expect = 1e-094
Identities = 167/177 (94%), Positives = 170/177 (96%)
Frame = +2
Query: 224 MELSHKIRLQDFKTINPDKFKLFVNGREGLSAEETLRLGSYNALLKTSLPGEFQYYKPEE 403
ME SHKIRLQDFKTINP+KFKLFVNGREGLSAEETLRLGSYNALLK SLP EFQYYKPEE
Sbjct: 1 MEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEE 60
Query: 404 ESFESSHDAFRSALPRGFAFEILSVYSGPPNIAFKFRHWGYFEGNFKGHAPTGEMVQFLG 583
ESFESSHDAFRSALPRGFA+EILSVYSGPP IAFKFRHWGYFEG FKGHAPTGEMVQFLG
Sbjct: 61 ESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLG 120
Query: 584 LGVLKVDELLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDSTAEKQSCPFTH* 754
LGVLKVDE LRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGD+TAEKQSCPFTH*
Sbjct: 121 LGVLKVDESLRAEEIEIYYDPGELFGGLLKGPPISETKTTDSGDNTAEKQSCPFTH* 177
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,031,614,975
Number of Sequences: 33410
Number of Extensions: 7031614975
Number of Successful Extensions: 243238164
Number of sequences better than 0.0: 0
|
