BLASTX 7.6.2
Query= UN13380 /QuerySize=1405
(1404 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297837401|ref|XP_002886582.1| ATRPAC42 [Arabidopsis lyrata su... 609 4e-172
gi|15219820|ref|NP_176282.1| DNA-directed RNA polymerase subunit... 597 2e-168
gi|514322|gb|AAB00528.1| RNA polymerase subunit [Arabidopsis tha... 595 7e-168
gi|21592304|gb|AAM64255.1| RNA polymerase subunit [Arabidopsis t... 592 8e-167
gi|297840495|ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata su... 559 6e-157
gi|15219773|ref|NP_176261.1| RNA polymerase I subunit 43 [Arabid... 555 8e-156
gi|225461965|ref|XP_002270559.1| PREDICTED: hypothetical protein... 504 2e-140
gi|255563568|ref|XP_002522786.1| DNA-directed RNA polymerase I/I... 497 2e-138
gi|255637183|gb|ACU18922.1| unknown [Glycine max] 474 2e-131
gi|224061238|ref|XP_002300385.1| predicted protein [Populus tric... 468 1e-129
gi|42571933|ref|NP_974057.1| DNA-directed RNA polymerase subunit... 437 3e-120
gi|242064360|ref|XP_002453469.1| hypothetical protein SORBIDRAFT... 426 6e-117
gi|115452445|ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japo... 424 2e-116
gi|212276110|ref|NP_001130839.1| hypothetical protein LOC1001919... 414 2e-113
gi|108707637|gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisati... 361 2e-097
gi|218191485|gb|EEC73912.1| hypothetical protein OsI_08749 [Oryz... 322 1e-085
gi|298708063|emb|CBJ30416.1| conserved unknown protein [Ectocarp... 265 2e-068
gi|297599856|ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japo... 229 1e-057
>gi|297837401|ref|XP_002886582.1| ATRPAC42 [Arabidopsis lyrata subsp. lyrata]
Length = 376
Score = 609 bits (1570), Expect = 4e-172
Identities = 308/378 (81%), Positives = 337/378 (89%), Gaps = 4/378 (1%)
Frame = -2
Query: 1304 MVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS- 1128
MVT+ +K FAKNF IDDLPDVP GLPPHLK +Q VVS +A + T IYSGSYVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPTGLPPHLKAQQT-GVVSNNNAPLHTASAIYSGSYVSSL 59
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
GVD++VKLGNFYE+FKVDVIS T+TDMEFDMIGIDAAFANAFRRILIAE+PSMAIEKVLI
Sbjct: 60 GVDDSVKLGNFYENFKVDVISLTKTDMEFDMIGIDAAFANAFRRILIAELPSMAIEKVLI 119
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSENDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT++L+WLPNGSEF++ESG STSKPKTYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSEFLRESGG--STSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
+PGQEIELEAHA+KGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLVK CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVKVCPQNVF 297
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVL 228
DIEDMG GRKRATVAQPR CTLC+EC+RD DLV+ VDL SV++HFIF IESTGSL PDVL
Sbjct: 298 DIEDMGKGRKRATVAQPRKCTLCQECVRDDDLVERVDLGSVRNHFIFNIESTGSLTPDVL 357
Query: 227 FTEAVKILEDKCERVIAD 174
FTEAVKILE KCE VIAD
Sbjct: 358 FTEAVKILEAKCETVIAD 375
>gi|15219820|ref|NP_176282.1| DNA-directed RNA polymerase subunit [Arabidopsis
thaliana]
Length = 375
Score = 597 bits (1538), Expect = 2e-168
Identities = 301/375 (80%), Positives = 330/375 (88%), Gaps = 4/375 (1%)
Frame = -2
Query: 1304 MVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS- 1128
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q R VVSK +A T IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTR-VVSKNNAPAHTASAIYSGTYVSST 59
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT++L+WLPNGSE ++ES TSKPKTYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
+PGQEIELEAHA+KGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVL 228
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVK+HFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 227 FTEAVKILEDKCERV 183
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|514322|gb|AAB00528.1| RNA polymerase subunit [Arabidopsis thaliana]
Length = 375
Score = 595 bits (1533), Expect = 7e-168
Identities = 300/375 (80%), Positives = 329/375 (87%), Gaps = 4/375 (1%)
Frame = -2
Query: 1304 MVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS- 1128
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q R VVSK +A T IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTR-VVSKNNAPAHTASAIYSGTYVSST 59
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E DQ NEKN IVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNNIVFKLHVKCPKNRPRLKV 179
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT++L+WLPNGSE ++ES TSKPKTYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
+PGQEIELEAHA+KGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVL 228
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVK+HFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 227 FTEAVKILEDKCERV 183
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|21592304|gb|AAM64255.1| RNA polymerase subunit [Arabidopsis thaliana]
Length = 375
Score = 592 bits (1524), Expect = 8e-167
Identities = 299/375 (79%), Positives = 328/375 (87%), Gaps = 4/375 (1%)
Frame = -2
Query: 1304 MVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS- 1128
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q R VVSK +A T IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTR-VVSKNNAPAHTASAIYSGTYVSST 59
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKV I
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVFI 119
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT++L+WLPNGSE ++ES TSK KTYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKLKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
+PGQEIELEAHA+KGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVL 228
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVK+HFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 227 FTEAVKILEDKCERV 183
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|297840495|ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
Length = 385
Score = 559 bits (1439), Expect = 6e-157
Identities = 284/381 (74%), Positives = 319/381 (83%), Gaps = 4/381 (1%)
Frame = -2
Query: 1307 RMVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS 1128
R+VT+E+K FAKNF I DLPDVP GLPPHL+L++ RA V K DA + T V+YSG+Y S
Sbjct: 8 RIVTDEEKQFAKNFNIFDLPDVPTGLPPHLELQRTRA-VCKNDAPIHPTSVLYSGAYASM 66
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
GVDN+V+L NF EDFKVDVIS TET M FDMIG+ A ANAFRRIL+AE+PSMAIEKV +
Sbjct: 67 GVDNSVRLENFSEDFKVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFV 126
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
A NTS+I DEVLAHR+GLIPIAADPRLFEYL+E DQPNEKNTIVFKLHVKCPKG R V
Sbjct: 127 ANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKV 186
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT+EL+WLPNGSE +KESG T+KPKTYTSFS SQDS P FA NPITPS DILI+KL
Sbjct: 187 LTSELKWLPNGSELVKESGG--LTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKL 244
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
PGQEIELEAHA+KGIGKTHAKWSPV TAWYRMLPEV+LL E E + AE LVK CP VF
Sbjct: 245 GPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVF 304
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDH-DLVDLVDLRSVKDHFIFKIESTGSLPPDV 231
DIEDMG GRKRATVA+PR+C+LC+ECIR+ + VDLR VK+HFIF IESTGS PPDV
Sbjct: 305 DIEDMGQGRKRATVARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDV 364
Query: 230 LFTEAVKILEDKCERVIADLS 168
LF EAVKILEDKCERVI++LS
Sbjct: 365 LFNEAVKILEDKCERVISELS 385
>gi|15219773|ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis
thaliana]
Length = 385
Score = 555 bits (1429), Expect = 8e-156
Identities = 283/381 (74%), Positives = 322/381 (84%), Gaps = 4/381 (1%)
Frame = -2
Query: 1307 RMVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS 1128
R+VT+E+K AKNF I DLPDVP GLPPHL+L++ R VV KKD+++ T + +SG+Y S
Sbjct: 8 RIVTDEEKREAKNFNIFDLPDVPTGLPPHLELQRTR-VVCKKDSNIHPTAITFSGAYSSM 66
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
GVDN+V+L NF EDFKVDVIS TETDM FDMIG+ A ANAFRRIL+AE+PSMAIEKV +
Sbjct: 67 GVDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYV 126
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
A NTS+I DEVLAHR+GLIPIAADPRLFEYL+E DQPNEKNTIVFKLHVKC KG R V
Sbjct: 127 ANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKV 186
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT+EL+WLPNGSE IKESG ST+T PKTYTSF+ SQDS PEFA+NPI P+ DILI+KL
Sbjct: 187 LTSELKWLPNGSELIKESGGSTTT--PKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKL 244
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 408
PGQEIELEAHA+KGIGKTHAKWSPV TAWYRMLPEVVLL E E + AE LVK CP VF
Sbjct: 245 GPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVF 304
Query: 407 DIEDMGNGRKRATVAQPRNCTLCKECIRDH-DLVDLVDLRSVKDHFIFKIESTGSLPPDV 231
DIEDMG GRKRATVA+PR+C+LC+ECIRD + D VDLR VK+HFIF IESTGS PP+V
Sbjct: 305 DIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEV 364
Query: 230 LFTEAVKILEDKCERVIADLS 168
LF EAVKILEDKCERVI++LS
Sbjct: 365 LFNEAVKILEDKCERVISELS 385
>gi|225461965|ref|XP_002270559.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 372
Score = 504 bits (1296), Expect = 2e-140
Identities = 252/366 (68%), Positives = 301/366 (82%), Gaps = 4/366 (1%)
Frame = -2
Query: 1256 DLPDVPAG-LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYEDFK 1080
D+PDVP G LPPH++L++ R V+ DA T +V YSG+Y S GVDN++++ F +F+
Sbjct: 8 DMPDVPKGQLPPHIELQRTR-VLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNFR 66
Query: 1079 VDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRI 900
V+VI +E DMEFDMIGID + ANAFRRILIAE+P+MAIEKVLIA NTS++ DEVLAHR+
Sbjct: 67 VEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHRL 126
Query: 899 GLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF-- 726
GLIPI ADPRLF+ L+E D PNEKNTIVF LHV+C +G RL V +NEL+WLP+GSEF
Sbjct: 127 GLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEFPL 186
Query: 725 IKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAIK 546
E+ S+STSKPKTYTSFSCSQDSLPEF+D I P H DI+I+KL PGQEIELEAHA+K
Sbjct: 187 ATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHAVK 246
Query: 545 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 366
G+GKTHAKWSPV TAWYRMLPEVVLL E+EDEKAE LVK CP+NVFDIED+ G+K+ATV
Sbjct: 247 GMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKATV 306
Query: 365 AQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILEDKCER 186
A+PR CTLC+ECIR D V +R VK+HFIF IESTG+LPP+VLF EAVK+LEDKCER
Sbjct: 307 ARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKCER 366
Query: 185 VIADLS 168
VI +LS
Sbjct: 367 VITELS 372
>gi|255563568|ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits,
putative [Ricinus communis]
Length = 374
Score = 497 bits (1279), Expect = 2e-138
Identities = 252/377 (66%), Positives = 303/377 (80%), Gaps = 8/377 (2%)
Frame = -2
Query: 1295 EEDKIFAKNFYIDDLPDVPAG-LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVD 1119
+E+K K F I DLPDVP G LPPHL+L++ R VV K DA + T +++YSG+Y S GVD
Sbjct: 5 QENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTR-VVCKSDAPIHTDNIVYSGAYASIGVD 63
Query: 1118 NTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYN 939
N+++L F ++FKV+VI T+ DMEFDMIGIDAA ANAFRRILI+E+P+MAIEKVLIA N
Sbjct: 64 NSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANN 123
Query: 938 TSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTN 759
TSLI DEVLAHR+GLIPI ADPRLFEYL+ D PNEKNTIVFKLH C +G+ R V +
Sbjct: 124 TSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSE 183
Query: 758 ELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPG 579
EL+WLP GS+ +KES + SKP TYTSF+ QD +P+ P++PS I+++KL PG
Sbjct: 184 ELKWLPGGSQLLKES--EKADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPG 237
Query: 578 QEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIE 399
QEIELEAHA+KG+GKTHAKWSPV TAWYRMLPEVVLL ++EDE AE L K CP+NVFDIE
Sbjct: 238 QEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIE 297
Query: 398 DMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTE 219
D+GNG+KRATVA+PR CTLC+ECIR + V LR VKDHFIF IESTG+LPP+VLFTE
Sbjct: 298 DIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTE 357
Query: 218 AVKILEDKCERVIADLS 168
AVK+LEDKCERVI +LS
Sbjct: 358 AVKVLEDKCERVITELS 374
>gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 474 bits (1218), Expect = 2e-131
Identities = 243/368 (66%), Positives = 293/368 (79%), Gaps = 3/368 (0%)
Frame = -2
Query: 1265 YIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYED 1086
+I L +VP+ LPPHL+L + R V+ DA V T V YSG+Y GVDN+V+L +F E+
Sbjct: 22 FILSLDNVPSKLPPHLELFKTR-VLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCEN 80
Query: 1085 FKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAH 906
FKV+V T++D+EFDMIGID A ANAFRRILIAEVP+MAIE+V IA NTS++ DEVL+H
Sbjct: 81 FKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSH 140
Query: 905 RIGLIPIAADPRLFEYLTET-DQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSE 729
R+GLIPI ADPRLFEY D NEKNTIVFKLHV+C GQ R+ V +++L+WLPNGSE
Sbjct: 141 RLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSE 200
Query: 728 FIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAI 549
E + SKPKT+TSF+CSQDSLPEF++N I ++ DI+++KL PGQEIELEAHA+
Sbjct: 201 LPCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAV 260
Query: 548 KGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRAT 369
KGIGKTHAKWSPV TAWYRMLPEVVLL VEDE AE L CP+NVFDIED+G G++RA
Sbjct: 261 KGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAK 320
Query: 368 VAQPRNCTLCKECIR-DHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILEDKC 192
VA+PR+CTLC+ECIR + D V LR VK+HFIF IESTG+LPP+VLFTEAVKILEDKC
Sbjct: 321 VARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 380
Query: 191 ERVIADLS 168
ERVI +LS
Sbjct: 381 ERVITELS 388
>gi|224061238|ref|XP_002300385.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 468 bits (1203), Expect = 1e-129
Identities = 246/383 (64%), Positives = 289/383 (75%), Gaps = 8/383 (2%)
Frame = -2
Query: 1310 ERMVTEEDKIFAK--NFYIDDLPDVPAG-LPPHLKLKQNRAVVSKKDASVDTTDVIYSGS 1140
ERM +EE++ K F +L DV G LPPH++ KQ V K DA +T + YSGS
Sbjct: 10 ERMSSEEEEQQQKEEGFSYWNLKDVERGQLPPHIR-KQGTRVYCKPDAPTNTETLQYSGS 68
Query: 1139 YVSSGVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIE 960
Y S GVDN+++L +F E+F++ VI+ + MEFDMIGIDAA ANAFRRILI+EVP+MAIE
Sbjct: 69 YASMGVDNSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIE 128
Query: 959 KVLIAYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQS 780
KV IA NTS+I DEVLAHR+GLIPI DPRLFEYL+ D PNEKNTIV KLH +C +GQ
Sbjct: 129 KVFIANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQP 188
Query: 779 RLHVLTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDIL 600
R V + EL+WLPNGSEF KES SKP TYTSFSC QDSLPEFA NPI+ DI+
Sbjct: 189 RCSVYSQELKWLPNGSEFAKES--EKPDSKPSTYTSFSCGQDSLPEFAGNPISTVE-DII 245
Query: 599 ISKLSPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCP 420
++KL PGQEIELEAHA+KG+GKTHAKWSPVGTAWYRM PEVVLL ++ E AE L++ CP
Sbjct: 246 LAKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCP 305
Query: 419 MNVFDIEDMGNGRKRATVAQPRNCTLCKECIR-DHDLVDLVDLRSVKDHFIFKIESTGSL 243
VFDIED GN +K+A VA R CTLC+ECIR D + V L VKDHFIF IESTG+L
Sbjct: 306 SGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGAL 365
Query: 242 PPDVLFTEAVKILEDKCERVIAD 174
PP+VLFTEAVKILE KCERVI +
Sbjct: 366 PPEVLFTEAVKILEAKCERVITE 388
>gi|42571933|ref|NP_974057.1| DNA-directed RNA polymerase subunit [Arabidopsis
thaliana]
Length = 302
Score = 437 bits (1122), Expect = 3e-120
Identities = 221/277 (79%), Positives = 245/277 (88%), Gaps = 4/277 (1%)
Frame = -2
Query: 1304 MVTEEDKIFAKNFYIDDLPDVPAGLPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSS- 1128
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q R VVSK +A T IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTR-VVSKNNAPAHTASAIYSGTYVSST 59
Query: 1127 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 948
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 947 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHV 768
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 767 LTNELQWLPNGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKL 588
LT++L+WLPNGSE ++ES TSKPKTYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 587 SPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEV 477
+PGQEIELEAHA+KGIGKTHAKWSPVGTAWYRM PEV
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEV 274
>gi|242064360|ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420
[Sorghum bicolor]
Length = 370
Score = 426 bits (1094), Expect = 6e-117
Identities = 213/365 (58%), Positives = 278/365 (76%), Gaps = 7/365 (1%)
Frame = -2
Query: 1274 KNFYIDDLPDVPAG-LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGN 1098
K+ +D+ P+ LP +L++++ R VV DA + T YSG++ + GVDN+V +
Sbjct: 7 KSKEVDNAPNQQENKLPDYLEVQRTR-VVCNADAPIHTQGYQYSGTFAAMGVDNSVSVEK 65
Query: 1097 FYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDE 918
F ++FK+++ TE DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEK+ + NTS+I DE
Sbjct: 66 FCKNFKIEINRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADE 125
Query: 917 VLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPN 738
VL+HR+GLIP+ ADPRLF+Y++E D PNE+NT+V+KLHV CPKG R+ V ++EL+WLP
Sbjct: 126 VLSHRLGLIPLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEWLPE 185
Query: 737 GSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEA 558
GS+ + + + S K KT+TSFS SQ E + P+ DI I++L PGQ IELEA
Sbjct: 186 GSQ-LSMAAPAQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIELEA 241
Query: 557 HAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRK 378
HA+KG+GK HAKWSPV TAWYRMLPEVV+L ++E + AE LVK CP+NVFDIED+GNG K
Sbjct: 242 HAVKGVGKVHAKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNGGK 301
Query: 377 RATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILED 198
RA VA+PR CTLC+EC+ + + V+LR V+DHFIF IESTG+LPP+VLFTEAVKILE+
Sbjct: 302 RAVVAKPRACTLCRECVMGPN-GNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEE 360
Query: 197 KCERV 183
KCERV
Sbjct: 361 KCERV 365
>gi|115452445|ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
Length = 379
Score = 424 bits (1089), Expect = 2e-116
Identities = 218/361 (60%), Positives = 272/361 (75%), Gaps = 11/361 (3%)
Frame = -2
Query: 1232 LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 1053
LP HL++++ R VV K DA V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTR-VVCKGDAPVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 1052 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 873
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 872 RLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFIKESGDSTSTS 693
RLFEY++E D P E+NTIV+KLHV C KG RL V + +L+WLP GS+ + + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 692 KPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAIKGIGKTHAKWSP 513
K KTYTSFS SQ + E P+ DI I++L PGQ IELE HA+KGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 512 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 333
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 332 CIRD------HDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILEDKCERVIADL 171
C+ V+ V+LR V+DHFIF IESTG+LPP++LFTEAV+ILE+KCERVI++L
Sbjct: 319 CVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFTEAVRILEEKCERVISEL 378
Query: 170 S 168
S
Sbjct: 379 S 379
>gi|212276110|ref|NP_001130839.1| hypothetical protein LOC100191943 [Zea mays]
Length = 372
Score = 414 bits (1063), Expect = 2e-113
Identities = 212/366 (57%), Positives = 271/366 (74%), Gaps = 7/366 (1%)
Frame = -2
Query: 1277 AKNFYIDDLPDVPAG-LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLG 1101
+K +DD+P+ LP +L+L++ R VV DA + T YSG++ + G+DN+V +
Sbjct: 8 SKKEKVDDVPNEQENKLPDYLELQRTR-VVCNADAPIHTQGFQYSGAFAAMGIDNSVSVD 66
Query: 1100 NFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVD 921
F ++FK+++ TE MEFDMIGIDA+ ANAFRRILI+EVP+MAIEKV +A N S+I D
Sbjct: 67 KFCKNFKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIAD 126
Query: 920 EVLAHRIGLIPIAADPRLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLP 741
EVL+HR+GLIP+ ADPRLFEY++E D PNE+NTIV+KLHV CPK R+ V ++EL+WLP
Sbjct: 127 EVLSHRLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSELEWLP 186
Query: 740 NGSEFIKESGDSTSTSKPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELE 561
GS+ + S + S K KT+TSFS SQ E + P+ + DI I++L PGQ IELE
Sbjct: 187 EGSQ-LSMSAPAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAIELE 242
Query: 560 AHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGR 381
AHA+KG G HAKWSPV TAWYRMLPEVV+L EVE +AE LV C +NVFDIED+ NG
Sbjct: 243 AHAVKGTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLANGG 302
Query: 380 KRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILE 201
KRA VA+PR CTLC+EC+ + V+LR V+DHFIF IESTGS+PP+VLFTEAVKILE
Sbjct: 303 KRAVVARPRACTLCRECVMGPN-EKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILE 361
Query: 200 DKCERV 183
+KC RV
Sbjct: 362 EKCARV 367
>gi|108707637|gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisation domain
containing protein, expressed [Oryza sativa Japonica Group]
Length = 352
Score = 361 bits (925), Expect = 2e-097
Identities = 183/302 (60%), Positives = 227/302 (75%), Gaps = 5/302 (1%)
Frame = -2
Query: 1232 LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 1053
LP HL++++ R VV K DA V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTR-VVCKGDAPVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 1052 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 873
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 872 RLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFIKESGDSTSTS 693
RLFEY++E D P E+NTIV+KLHV C KG RL V + +L+WLP GS+ + + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 692 KPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAIKGIGKTHAKWSP 513
K KTYTSFS SQ + E P+ DI I++L PGQ IELE HA+KGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 512 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 333
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 332 CI 327
C+
Sbjct: 319 CV 320
>gi|218191485|gb|EEC73912.1| hypothetical protein OsI_08749 [Oryza sativa Indica
Group]
Length = 332
Score = 322 bits (824), Expect = 1e-085
Identities = 165/292 (56%), Positives = 210/292 (71%), Gaps = 5/292 (1%)
Frame = -2
Query: 1232 LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 1053
LP HL++++ R VV K DA V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTR-VVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 1052 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 873
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 872 RLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFIKESGDSTSTS 693
R FEY++E D PNE+NTIV+KLHV C KG RL V + +L+WLP GS + + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 692 KPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAIKGIGKTHAKWSP 513
K KTYTSFS SQ + E P+ DI I++L PGQ I LE H +KG+GK HAKWSP
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIVLEVHGVKGMGKVHAKWSP 256
Query: 512 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQP 357
V TAWYRM PEVV E++ + AE+LVK CP+NVFDIED+GN +T P
Sbjct: 257 VATAWYRMFPEVVFRKEIKGDNAEKLVKKCPVNVFDIEDLGNVTIESTGGLP 308
>gi|298708063|emb|CBJ30416.1| conserved unknown protein [Ectocarpus
siliculosus]
Length = 361
Score = 265 bits (675), Expect = 2e-068
Identities = 145/305 (47%), Positives = 192/305 (62%), Gaps = 25/305 (8%)
Frame = -2
Query: 1052 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 873
++ FD++G+DA+ ANA RRIL+AEV ++AIE V + N+S+I DE+LAHR+GLIPI A+P
Sbjct: 57 ELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANP 116
Query: 872 RLFEYL----TETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFIKESGDS 705
R+FE++ E D+P E NT VFKL VK P P +G S
Sbjct: 117 RMFEFVGEEGGEQDEPTEFNTCVFKLEVKNPAD--------------PADMPDPMPTGTS 162
Query: 704 TSTSKPKTYTSFSCSQDSLPE-------FADNPITPSHLDILISKLSPGQEIELEAHAIK 546
+ +T FS + + P + + P H DILI+KL PGQEI E H K
Sbjct: 163 YAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRK 222
Query: 545 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 366
GIGK HAK+SPV TA YR+LP V L EVE ++AE LV CP+NVFDIED+G KRA V
Sbjct: 223 GIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 282
Query: 365 AQPRNCTLCKECIRDHDLVDLVDLRSVKDHFIFKIESTGSLPPDVLFTEAVKILEDKCER 186
A+PR+CT+C+ECIR+ D V L V DHFIF IES G LPP L +++++L KC+
Sbjct: 283 ARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDS 342
Query: 185 VIADL 171
+IA++
Sbjct: 343 MIAEV 347
>gi|297599856|ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japonica Group]
Length = 300
Score = 229 bits (583), Expect = 1e-057
Identities = 121/221 (54%), Positives = 158/221 (71%), Gaps = 5/221 (2%)
Frame = -2
Query: 1232 LPPHLKLKQNRAVVSKKDASVDTTDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 1053
LP HL++++ R VV K DA V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTR-VVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 1052 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 873
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 872 RLFEYLTETDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFIKESGDSTSTS 693
R FEY++E D PNE+NTIV+KLHV C KG RL V + +L+WLP GS + + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 692 KPKTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEI 570
K KTYTSFS SQ + E P+ DI I++L PGQ +
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQVV 237
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,628,988,984
Number of Sequences: 15229318
Number of Extensions: 1572628988984
Number of Successful Extensions: 405575147
Number of sequences better than 0.0: 0
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