BLASTX 7.6.2
Query= UN13403 /QuerySize=1036
(1035 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4FV84|MRT4_BOVIN mRNA turnover protein 4 homolog OS=Bos taur... 208 7e-053
sp|Q9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog OS=Homo sap... 205 7e-052
sp|Q9D0I8|MRT4_MOUSE mRNA turnover protein 4 homolog OS=Mus musc... 205 7e-052
sp|Q86HD3|MRT4_DICDI mRNA turnover protein 4 homolog OS=Dictyost... 172 5e-042
sp|Q9USZ6|MRT4_SCHPO mRNA turnover protein 4 homolog OS=Schizosa... 102 5e-021
sp|Q7S302|MRT4_NEUCR mRNA turnover protein 4 homolog OS=Neurospo... 98 7e-020
sp|P33201|MRT4_YEAST mRNA turnover protein 4 OS=Saccharomyces ce... 96 3e-019
sp|Q6FJ04|MRT4_CANGA mRNA turnover protein 4 homolog OS=Candida ... 94 1e-018
sp|Q75DK9|MRT4_ASHGO mRNA turnover protein 4 homolog OS=Ashbya g... 91 2e-017
sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Meth... 61 1e-008
sp|A6VIP9|RLA0_METM7 Acidic ribosomal protein P0 homolog OS=Meth... 61 1e-008
sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Meth... 60 2e-008
sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Meth... 60 3e-008
sp|P54049|RLA0_METJA Acidic ribosomal protein P0 homolog OS=Meth... 55 7e-007
sp|A6UTF8|RLA0_META3 Acidic ribosomal protein P0 homolog OS=Meth... 53 3e-006
sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Meth... 52 6e-006
>sp|A4FV84|MRT4_BOVIN mRNA turnover protein 4 homolog OS=Bos taurus GN=MRTO4
PE=2 SV=1
Length = 239
Score = 208 bits (528), Expect = 7e-053
Identities = 109/239 (45%), Positives = 152/239 (63%), Gaps = 3/239 (1%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MPKSKRD+ V+L+KT KKG K+ ++ +R V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
+ + FF G NKVM VALGRS SDE + + + SK L G+ GLL T+ KEEV+ F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKY 119
Query: 483 EDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 662
+ D++R G+ A TV L GPLEQF H MEP LR+ G+P L KG V LLSD+ VC+EG
Sbjct: 120 TEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 179
Query: 663 KPLSPESSRILRLLGIKLATFKLNLVCRWSPSDFELYREGLDL--SDVETS*KSQDFDD 833
L+PE +R+L+L G ++A FK+++ W + G DL S E+ +S++ DD
Sbjct: 180 DVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGDDLPESAPESEGESEEEDD 238
>sp|Q9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog OS=Homo sapiens GN=MRTO4
PE=1 SV=2
Length = 239
Score = 205 bits (519), Expect = 7e-052
Identities = 108/239 (45%), Positives = 149/239 (62%), Gaps = 3/239 (1%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MPKSKRD+ V+L+KT KKG K+ ++ +R V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
+ + FF G NKVM VALGRS SDE + + + SK L G+ GLL T+ KEEV F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKY 119
Query: 483 EDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 662
+ D++R G+ A TV L GPLEQF H MEP LR+ G+P L +G V LLSD+ VC+EG
Sbjct: 120 TEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEG 179
Query: 663 KPLSPESSRILRLLGIKLATFKLNLVCRWSPSDFELYREGLDL--SDVETS*KSQDFDD 833
L+PE +R+L+L G ++A FK+ + W + G DL S E++ +S DD
Sbjct: 180 DVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASESTEESDSEDD 238
>sp|Q9D0I8|MRT4_MOUSE mRNA turnover protein 4 homolog OS=Mus musculus GN=Mrto4
PE=2 SV=1
Length = 239
Score = 205 bits (519), Expect = 7e-052
Identities = 109/239 (45%), Positives = 150/239 (62%), Gaps = 3/239 (1%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MPKSKRD+ V+L+KT KKG K+ ++ +R V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
+ + FF G NKVM VALGRS SDE + + + SK L G+ GLL T+ KEEV F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKY 119
Query: 483 EDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 662
+ DF+R G+ A TV L GPL+QF H MEP LR+ G+P L KG V LLSD+ VC+EG
Sbjct: 120 TEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 179
Query: 663 KPLSPESSRILRLLGIKLATFKLNLVCRWSPSD--FELYREGLDLSDVETS*KSQDFDD 833
L+PE +RIL+L G ++A FK+ + W F+ + L S E+ +S++ DD
Sbjct: 180 DVLTPEQARILKLFGYEMAEFKVIIKYMWDAQSGRFQQMDDDLPESAPESEGESEEEDD 238
>sp|Q86HD3|MRT4_DICDI mRNA turnover protein 4 homolog OS=Dictyostelium
discoideum GN=mrt4 PE=3 SV=1
Length = 223
Score = 172 bits (434), Expect = 5e-042
Identities = 83/219 (37%), Positives = 133/219 (60%), Gaps = 1/219 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
M KSKR+ V ++K K K+ +V+ I+D V++Y +Y+F+FENMRN K K R ++
Sbjct: 1 MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
KF G NKV+ V LG+S DE++P + K ++ L G+ GL T+ PK++V F Y
Sbjct: 61 -STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNY 119
Query: 483 EDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 662
+ DF R+G + ET+ +KEGP+ TH ME +LR G+P L G + + ++ +CE G
Sbjct: 120 SEKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAG 179
Query: 663 KPLSPESSRILRLLGIKLATFKLNLVCRWSPSDFELYRE 779
++PE S++L+L +++ FK ++ W+ +F L E
Sbjct: 180 VAVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTLCEE 218
>sp|Q9USZ6|MRT4_SCHPO mRNA turnover protein 4 homolog OS=Schizosaccharomyces
pombe GN=SPBC11G11.03 PE=2 SV=1
Length = 241
Score = 102 bits (253), Expect = 5e-021
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MPKS+R + +TL++T+KKG K + +G++ +++ + +++F NMRN K R +
Sbjct: 1 MPKSRRSKVLTLAQTEKKGHEGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
+ + F+G KVM ALG + +E + K +K+LHG GLL T+ +EV F ++
Sbjct: 61 K-GSRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESF 119
Query: 483 EDSDFSRTGSTAVETVELKEGPL 551
+DF+R G+ A T + GP+
Sbjct: 120 VQNDFARAGAVAPFTHVIPAGPV 142
>sp|Q7S302|MRT4_NEUCR mRNA turnover protein 4 homolog OS=Neurospora crassa
GN=NCU07547 PE=3 SV=1
Length = 252
Score = 98 bits (243), Expect = 7e-020
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MPKSKR + L++ KK R KE + IR+ + Y +VFS +NMRN K+ R++
Sbjct: 1 MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
+ + F G K+ ALG + D G+ K SK L G GL+ T+ E++ F
Sbjct: 61 -NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNL 119
Query: 483 EDSDFSRTGSTAVETVELKEGPL 551
DF+R GS A T+ + GPL
Sbjct: 120 TQVDFARAGSVATRTITIPSGPL 142
>sp|P33201|MRT4_YEAST mRNA turnover protein 4 OS=Saccharomyces cerevisiae
GN=MRT4 PE=1 SV=1
Length = 236
Score = 96 bits (238), Expect = 3e-019
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MP+SKR + VTL++T KKGR +KE I + +R+A++ Y V+V +++R +E R +
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
K +G KV+Q ALG +E + +++ SK+ G GLL TD V+ F +Y
Sbjct: 61 -AGSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSY 119
Query: 483 EDSDFSRTGSTAVETVELKEG 545
SD+SR + A T + EG
Sbjct: 120 VRSDYSRPNTKAPLTFTIPEG 140
>sp|Q6FJ04|MRT4_CANGA mRNA turnover protein 4 homolog OS=Candida glabrata
GN=MRT4 PE=3 SV=1
Length = 239
Score = 94 bits (233), Expect = 1e-018
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MP+SKR + VTL++T KKGR +KE I + +R+A++ Y V+V +++R +E R+ +
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVFVLQLDDVRTPVLQEIREAW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
K +G KV++ ALG + E + + K +K G GLL T+ + V+ F AY
Sbjct: 61 -VGSKLLMGKRKVLEKALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKEYFEAY 119
Query: 483 EDSDFSRTGSTAVETVELKEG 545
D+SR S A T E+ EG
Sbjct: 120 SRLDYSRPNSRAPITFEVPEG 140
>sp|Q75DK9|MRT4_ASHGO mRNA turnover protein 4 homolog OS=Ashbya gossypii GN=MRT4
PE=3 SV=1
Length = 236
Score = 91 bits (223), Expect = 2e-017
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +3
Query: 123 MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQF 302
MP+SKR + VTL++T+KKGR +KE I + +R A++ Y V+V E++R +E R +
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRQALDTYRYVWVLRLEDVRTPVLQEIRSAW 60
Query: 303 RQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 482
K +G KV++ ALG + E + + K G GLL TD E V + F Y
Sbjct: 61 -AGSKLIMGRRKVLEKALGGTRETEYKENVSGLVKQCEGMCGLLFTDETPETVTAYFREY 119
Query: 483 EDSDFSRTGSTAVETVELKEG 545
+D+SR S A VE+ G
Sbjct: 120 RKADYSRAKSRAPLRVEIPAG 140
>sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1
Length = 335
Score = 61 bits (147), Expect = 1e-008
Identities = 44/194 (22%), Positives = 90/194 (46%)
Frame = +3
Query: 159 SKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNK 338
+K++ K K VN +++ ++ S + + + ++ +E R + R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 339 VMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTA 518
+M+ A+ A + P K + L A ++ T+M ++ + + + G+TA
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATA 123
Query: 519 VETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILR 698
+E+K G L+ G+P ++KG + + D VV +EG+ +S + + +L
Sbjct: 124 PCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLS 183
Query: 699 LLGIKLATFKLNLV 740
LGIK T LN++
Sbjct: 184 ALGIKPVTVGLNVL 197
>sp|A6VIP9|RLA0_METM7 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1
Length = 335
Score = 61 bits (147), Expect = 1e-008
Identities = 44/194 (22%), Positives = 90/194 (46%)
Frame = +3
Query: 159 SKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNK 338
+K++ K K VN +++ ++ S + + + ++ +E R + R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 339 VMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTA 518
+M+ A+ A + P K + L A ++ T+M ++ + + + G+TA
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATA 123
Query: 519 VETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILR 698
+E+K G L+ G+P ++KG + + D VV +EG+ +S + + +L
Sbjct: 124 PCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVLS 183
Query: 699 LLGIKLATFKLNLV 740
LGIK T LN++
Sbjct: 184 ALGIKPVTVGLNVL 197
>sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1
Length = 335
Score = 60 bits (145), Expect = 2e-008
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Frame = +3
Query: 159 SKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNK 338
+K++ K K VN +++ ++ S + + + ++ +E R + R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 339 VMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRT---- 506
+M+ A+ A + P K + A ++ T+M + F Y+ D S++
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEM------NPFKLYKTLDESKSPAPV 117
Query: 507 --GSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPE 680
G+ A +E+K G L+ G+P ++KG + + D VV +EG+ +S +
Sbjct: 118 KGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQK 177
Query: 681 SSRILRLLGIKLATFKLNLV 740
S +L LGIK T LN++
Sbjct: 178 LSVVLSALGIKPVTVGLNVL 197
>sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2
Length = 336
Score = 60 bits (143), Expect = 3e-008
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Frame = +3
Query: 159 SKTKKKGRAHKEVIVNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNK 338
+K++ K K VN +++ ++ + + + + ++ +E R + R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 339 VMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFS---RTG 509
+++ A+ A + P K L A ++VT+M LF E+S + G
Sbjct: 64 LIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEM---NPFKLFKTLEESKSPAPIKGG 120
Query: 510 STAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSR 689
+ A +E+K G L+ G+P ++KG + + D VV +EG +SP+ +
Sbjct: 121 AIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAV 180
Query: 690 ILRLLGIKLATFKLNLV 740
+L LGIK T LN++
Sbjct: 181 VLSALGIKPVTVGLNVL 197
>sp|P54049|RLA0_METJA Acidic ribosomal protein P0 homolog OS=Methanocaldococcus
jannaschii GN=rplP0 PE=1 SV=2
Length = 338
Score = 55 bits (131), Expect = 7e-007
Identities = 38/155 (24%), Positives = 73/155 (47%)
Frame = +3
Query: 276 KFKEFRQQFRQNGKFFLGSNKVMQVALGRSASDEMRPGIFKASKMLHGDAGLLVTDMPKE 455
+ +E R + R K + N ++ AL +A + P + + + + A +LVTDM
Sbjct: 42 QLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPF 101
Query: 456 EVESLFNAYEDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELL 635
++ L + R G A +++++G L+ G+P + KG + +
Sbjct: 102 KLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIK 161
Query: 636 SDFVVCEEGKPLSPESSRILRLLGIKLATFKLNLV 740
D VV ++G+ +SP+ + +L LGIK LN++
Sbjct: 162 EDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNIL 196
>sp|A6UTF8|RLA0_META3 Acidic ribosomal protein P0 homolog OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1
Length = 338
Score = 53 bits (126), Expect = 3e-006
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Frame = +3
Query: 201 VNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNKVMQVALGRSASDEM 380
VN ++ +++ + + + ++ +E R R + N +++ A+ A +
Sbjct: 17 VNNLKKLLKEGQVIALVDMMEVPAVQLQEIRDNIRDLMTLRMSRNTLIKRAIEELAEESN 76
Query: 381 RPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFS---RTGSTAVETVELKEGPL 551
P K ++ L A +++TDM L+ ED + G+ A + ++ G
Sbjct: 77 DPKFAKLAECLERGAAIVITDM---NPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGST 133
Query: 552 EQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILRLLGIKLATFKL 731
L+ G+P ++KG + + D V+ +EG+ +SP+ + +L LGIK L
Sbjct: 134 GMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVLSALGIKPTKVGL 193
Query: 732 NLVCRW 749
+L+ +
Sbjct: 194 DLLAAY 199
>sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Methanococcus
thermolithotrophicus GN=rplP0 PE=3 SV=1
Length = 338
Score = 52 bits (123), Expect = 6e-006
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Frame = +3
Query: 201 VNGIRDAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNKVMQVALGRSASDEM 380
VN +++ ++ V + + + +E R + R + N +++ A+ A +
Sbjct: 18 VNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETG 77
Query: 381 RPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTAVETVELKEGPLEQF 560
P K + + A ++ TDM ++ + + G+ A +E+K G
Sbjct: 78 NPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMP 137
Query: 561 THEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILRLLGIKLATFKLNLV 740
L+ G+P + KG + + D VV + G+ +S + + +L LGIK T LNL+
Sbjct: 138 PGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVTVGLNLL 197
Query: 741 CRWSPSDFELYR-EGLDLSDVETS*KSQDFDDQLF*VS 851
+ D +Y + L + + E K QD + F +S
Sbjct: 198 AAY--EDGVIYTPDVLKIDEEEFVQKIQDAYSKAFNLS 233
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0
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