BLASTX 7.6.2
Query= UN13408 /QuerySize=875
(874 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L... 365 2e-101
TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L... 347 7e-096
TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L... 346 1e-095
TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIB... 342 2e-094
>TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L18A (RPL18aB) |
chr2:14532916-14534161 REVERSE
Length = 179
Score = 365 bits (936), Expect = 2e-101
Identities = 175/179 (97%), Positives = 178/179 (99%)
Frame = -1
Query: 838 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 659
MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 658 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 479
LAINEI+EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 478 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 302
PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPP+RKLKTTYKA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM* 179
>TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L18A (RPL18aC) |
chr3:4910773-4911933 FORWARD
Length = 179
Score = 347 bits (889), Expect = 7e-096
Identities = 166/179 (92%), Positives = 169/179 (94%)
Frame = -1
Query: 838 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 659
MG FRFHQYQVVGRALPTE D PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60
Query: 658 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 479
LAINEIFEKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120
Query: 478 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 302
PCIQIIKTATVPAKLCKRE TKQFHNSKIKFPLVFRKVRPP+RKLKTTYKASKPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 179
>TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L18A (RPL18aA)
| chr1:10498458-10499373 REVERSE
Length = 179
Score = 346 bits (887), Expect = 1e-095
Identities = 166/179 (92%), Positives = 170/179 (94%)
Frame = -1
Query: 838 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 659
M R HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQM
Sbjct: 1 MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60
Query: 658 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 479
LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 478 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 302
PCIQIIKTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 179
>TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1); structural constituent of ribosome | chr1:10498458-10501311
REVERSE
Length = 313
Score = 342 bits (877), Expect = 2e-094
Identities = 164/173 (94%), Positives = 168/173 (97%)
Frame = -1
Query: 820 HQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 641
HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQMLAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200
Query: 640 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 461
FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260
Query: 460 KTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 302
KTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+KPNLFM*
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 313
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,123,800,757
Number of Sequences: 33410
Number of Extensions: 7123800757
Number of Successful Extensions: 248504601
Number of sequences better than 0.0: 0
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