BLASTX 7.6.2
Query= UN13419 /QuerySize=1161
(1160 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20050.1 | Symbols: QRT3 | QRT3 (QUARTET 3); p... 425 3e-119
TAIR9_protein||AT4G20050.2 | Symbols: QRT3 | QRT3 (QUARTET 3); p... 425 3e-119
TAIR9_protein||AT4G20040.1 | Symbols: | FUNCTIONS IN: molecular... 253 1e-067
>TAIR9_protein||AT4G20050.1 | Symbols: QRT3 | QRT3 (QUARTET 3);
polygalacturonase | chr4:10849911-10852090 REVERSE
Length = 482
Score = 425 bits (1092), Expect = 3e-119
Identities = 212/251 (84%), Positives = 231/251 (92%)
Frame = +1
Query: 157 IFETFLGQHITAGGAKGERSFSGTAVNLVGNDNAVTDTVIFSAGIGVMISGQANLLSGVH 336
I +FLGQHITAGG +GERSFSGTA+NL+GNDNAVTDTVIFSA IGVM+SGQANLLSGVH
Sbjct: 232 IRNSFLGQHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVH 291
Query: 337 CYNKATGFGGTGIYLKLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS 516
CYNKATGFGGTGIYL+LPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS
Sbjct: 292 CYNKATGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS 351
Query: 517 INGVVRGVNIVDNMFSGSGNGVQIVQLDQTNKAFENVDQVVVDRNNVNGMAMRSTVAKAS 696
I G +RGV+IVDNMFSGSG+GVQIVQLDQ N AF++V QVVVDRN+VNGM +STVA+ S
Sbjct: 352 IAGYIRGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGS 411
Query: 697 VDGNGTSWTVDFNPVLLFPNLIKHVQYTLVAREDGAFPVHAVRNVSDNRVVVQTNAPVTA 876
VDGNGTSWTVDFNPVLLFP+LI HVQYTLVA E G FP+HA+RNVSDNRVVV+TNAPVT
Sbjct: 412 VDGNGTSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTG 471
Query: 877 QVYVTVDQ*V* 909
VYVTV+Q V*
Sbjct: 472 TVYVTVNQGV* 482
Score = 113 bits (282), Expect = 2e-025
Identities = 54/61 (88%), Positives = 55/61 (90%)
Frame = +3
Query: 3 EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVQKGHETYIRNFSRST 182
EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILV+ GHETYIRN
Sbjct: 180 EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQ 239
Query: 183 H 185
H
Sbjct: 240 H 240
>TAIR9_protein||AT4G20050.2 | Symbols: QRT3 | QRT3 (QUARTET 3);
polygalacturonase | chr4:10849911-10852090 REVERSE
Length = 482
Score = 425 bits (1092), Expect = 3e-119
Identities = 212/251 (84%), Positives = 231/251 (92%)
Frame = +1
Query: 157 IFETFLGQHITAGGAKGERSFSGTAVNLVGNDNAVTDTVIFSAGIGVMISGQANLLSGVH 336
I +FLGQHITAGG +GERSFSGTA+NL+GNDNAVTDTVIFSA IGVM+SGQANLLSGVH
Sbjct: 232 IRNSFLGQHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVH 291
Query: 337 CYNKATGFGGTGIYLKLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS 516
CYNKATGFGGTGIYL+LPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS
Sbjct: 292 CYNKATGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS 351
Query: 517 INGVVRGVNIVDNMFSGSGNGVQIVQLDQTNKAFENVDQVVVDRNNVNGMAMRSTVAKAS 696
I G +RGV+IVDNMFSGSG+GVQIVQLDQ N AF++V QVVVDRN+VNGM +STVA+ S
Sbjct: 352 IAGYIRGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGS 411
Query: 697 VDGNGTSWTVDFNPVLLFPNLIKHVQYTLVAREDGAFPVHAVRNVSDNRVVVQTNAPVTA 876
VDGNGTSWTVDFNPVLLFP+LI HVQYTLVA E G FP+HA+RNVSDNRVVV+TNAPVT
Sbjct: 412 VDGNGTSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTG 471
Query: 877 QVYVTVDQ*V* 909
VYVTV+Q V*
Sbjct: 472 TVYVTVNQGV* 482
Score = 113 bits (282), Expect = 2e-025
Identities = 54/61 (88%), Positives = 55/61 (90%)
Frame = +3
Query: 3 EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVQKGHETYIRNFSRST 182
EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILV+ GHETYIRN
Sbjct: 180 EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQ 239
Query: 183 H 185
H
Sbjct: 240 H 240
>TAIR9_protein||AT4G20040.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase
fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat
(InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: QRT3
(QUARTET 3); polygalacturonase (TAIR:AT4G20050.2); Has 90 Blast hits to
90 proteins in 38 species: Archae - 0; Bacteria - 51; Metazoa - 0;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink). | chr4:10847348-10848963 REVERSE
Length = 484
Score = 253 bits (646), Expect = 1e-067
Identities = 131/245 (53%), Positives = 174/245 (71%), Gaps = 8/245 (3%)
Frame = +1
Query: 157 IFETFLGQHITAGGAKGERSFSGTAVNLVGNDNAVTDTVIFSAGIGVMISGQANLLSGVH 336
I +FLGQH T GG + ER F+GT +++ NDNA+TD VIFSAGIG+ ++G AN+++GVH
Sbjct: 242 ISNSFLGQHSTVGGDREERGFTGTGIDISSNDNAITDVVIFSAGIGISLNGGANMVTGVH 301
Query: 337 CYNKATGFGGTGIYLKLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKS 516
CYNKAT FGG GI +K LT RI N YLDYTGIV EDPV + ++ FLGDA I+L+S
Sbjct: 302 CYNKATWFGGIGILVK-SHLT--RIDNCYLDYTGIVIEDPVHVHVTNALFLGDANIVLRS 358
Query: 517 INGVVRGVNIVDNMFSGSG-NGVQIVQLDQTNKAFENVDQVVVDRNNVNGMAMRSTVAKA 693
++G + GVNIV+NMFSG+ N IV+L+ F +++QVV+D+NN GM ++ST KA
Sbjct: 359 VHGKISGVNIVNNMFSGTAKNNFPIVKLE---GEFHDINQVVIDQNNAEGMMLKSTTGKA 415
Query: 694 SVDGNGTSWTVDFNPVLLFPNLIKHVQYTLVAREDGAFPVHAVRNVSDNRVVVQTNAPVT 873
V NGT W DF+PVL+FPN I H Q++ A + G P +AV NVS+N VVV+T+ VT
Sbjct: 416 MVSANGTRWIADFSPVLVFPNRINHYQHSFFA-QSGQIPANAVTNVSNNMVVVETDRAVT 474
Query: 874 AQVYV 888
V +
Sbjct: 475 GTVSI 479
Score = 62 bits (148), Expect = 8e-010
Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 EYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVQKGHETYIRNFSRST 182
E +T +D+L D +RGG I VI+S R I NCY F T GI VQ GHETYI N
Sbjct: 191 EDVTFQDVLFDSRFRGGGILVIDSARIRITNCYFLHF-TTQGIKVQGGHETYISNSFLGQ 249
Query: 183 HNRWWSQRRE 212
H+ R E
Sbjct: 250 HSTVGGDREE 259
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,123,800,757
Number of Sequences: 33410
Number of Extensions: 7123800757
Number of Successful Extensions: 248504601
Number of sequences better than 0.0: 0
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