BLASTX 7.6.2
Query= UN13426 /QuerySize=1280
(1279 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8AVP1|RPF1_XENLA Ribosome production factor 1 OS=Xenopus lae... 246 3e-064
sp|Q7TND5|RPF1_MOUSE Ribosome production factor 1 OS=Mus musculu... 231 1e-059
sp|Q5RJS9|RPF1_RAT Ribosome production factor 1 OS=Rattus norveg... 229 5e-059
sp|Q5R631|RPF1_PONAB Ribosome production factor 1 OS=Pongo abeli... 228 1e-058
sp|Q9H9Y2|RPF1_HUMAN Ribosome production factor 1 OS=Homo sapien... 227 2e-058
sp|Q6IQU6|RPF1_DANRE Ribosome production factor 1 OS=Danio rerio... 225 9e-058
sp|P54073|YUY1_CAEEL Brix domain-containing protein F44G4.1 OS=C... 217 1e-055
sp|Q9VKB4|RPF1_DROME Probable ribosome production factor 1 OS=Dr... 207 2e-052
sp|O14180|YDS4_SCHPO Brix domain-containing protein C4F8.04 OS=S... 201 1e-050
sp|P38805|RPF1_YEAST Ribosome production factor 1 OS=Saccharomyc... 187 2e-046
sp|Q755T8|IMP4_ASHGO U3 small nucleolar ribonucleoprotein protei... 136 3e-031
sp|O13823|IMP4_SCHPO U3 small nucleolar ribonucleoprotein protei... 136 3e-031
sp|P53941|IMP4_YEAST U3 small nucleolar ribonucleoprotein protei... 136 4e-031
sp|Q6FNN7|IMP4_CANGA U3 small nucleolar ribonucleoprotein protei... 132 5e-030
sp|O62518|YHPK_CAEEL Brix domain-containing protein ZK795.3 OS=C... 127 2e-028
sp|Q0VD01|IMP4_BOVIN U3 small nucleolar ribonucleoprotein protei... 125 1e-027
sp|Q8VHZ7|IMP4_MOUSE U3 small nucleolar ribonucleoprotein protei... 124 2e-027
sp|Q5PQR5|IMP4_RAT U3 small nucleolar ribonucleoprotein protein ... 124 2e-027
sp|Q6C804|IMP4_YARLI U3 small nucleolar ribonucleoprotein protei... 124 2e-027
sp|Q96G21|IMP4_HUMAN U3 small nucleolar ribonucleoprotein protei... 122 5e-027
>sp|Q8AVP1|RPF1_XENLA Ribosome production factor 1 OS=Xenopus laevis GN=rpf1
PE=2 SV=1
Length = 343
Score = 246 bits (627), Expect = 3e-064
Identities = 136/305 (44%), Positives = 187/305 (61%), Gaps = 21/305 (6%)
Frame = +2
Query: 56 ERSDQKKRMGFKRKKGDGDGEEMEAEDNRR------PSFNTAERRNVILPSMIKNKDKRA 217
E QKK + + GEE A + ++ P+F+ +E IKNK +R
Sbjct: 8 EAKKQKKMKNKSKVEETDAGEEAGASEEQQQVTRLPPAFSLSE---------IKNKQRRQ 58
Query: 218 KVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPDDE 397
++ K K EK+ E K+ R +K+ LG++ P K VPKTIEN R DET P DE
Sbjct: 59 FMFIKLKQEKRKE---KLILRKKRKKEREALGDKAPPKPVPKTIENQRVYDETTVDPADE 115
Query: 398 ELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLK 577
E+ D DEF P ++ TPK+LITT R F +L S+IPNSD R LK
Sbjct: 116 EVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSDVYYRRGLALK 175
Query: 578 KIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHG-NPTS 754
KI+ +DYT L+V++ +R+ P+ L++ LP+GPTAHFK+SN+ LRK++K G PT
Sbjct: 176 KIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVRLRKEMKRKGKEPTE 235
Query: 755 HEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYIFDVKE 934
H+PE+ILNNFTTRLG+ +GR F SL+P +P+F GR+V TFHNQRD+I FR+HRY+F K
Sbjct: 236 HKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFRYHRYLF--KS 293
Query: 935 DKQSG 949
+K+ G
Sbjct: 294 EKKVG 298
>sp|Q7TND5|RPF1_MOUSE Ribosome production factor 1 OS=Mus musculus GN=Rpf1 PE=2
SV=2
Length = 349
Score = 231 bits (588), Expect = 1e-059
Identities = 129/304 (42%), Positives = 181/304 (59%), Gaps = 11/304 (3%)
Frame = +2
Query: 56 ERSDQKKRMGFKRKKGDGDGEEMEAEDNRRPSFNTAERRNVILP-----SMIKNKDKRAK 220
E+S + G KRK + +E A + + P S IKNK +R
Sbjct: 6 EKSVGGGKRGLKRKAAAEEPQEAAAASDGTAESGVQPAKAAAFPPGFSISEIKNKQRRHL 65
Query: 221 VYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPDDEE 400
++ + K + ++++K+ A+ +K+ LG++ P K VPKTI+N R DET P+DEE
Sbjct: 66 MFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEE 122
Query: 401 LFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKK 580
+ D DEF R+ +PK+LITT R +L +VIP+S R LKK
Sbjct: 123 VAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKK 182
Query: 581 IVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHG-NPTSH 757
I+ +D+T LIV++ +R+ P+ L++ LPNGPTAHFK+S++ LRK+IK G +PT H
Sbjct: 183 IIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEH 242
Query: 758 EPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYIFDVKED 937
PE+ILNNFTTRLG+ +GR F SLFP P F GR+V TFHNQRD+I FR HRYIF K +
Sbjct: 243 VPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF--KSE 300
Query: 938 KQSG 949
K+ G
Sbjct: 301 KKVG 304
>sp|Q5RJS9|RPF1_RAT Ribosome production factor 1 OS=Rattus norvegicus GN=Rpf1
PE=2 SV=2
Length = 345
Score = 229 bits (582), Expect = 5e-059
Identities = 127/304 (41%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Frame = +2
Query: 56 ERSDQKKRMGFKRKKGDGDGEEMEAEDNRRPSFNTAERRNVILP-----SMIKNKDKRAK 220
E+S + G KRK + +E + + P S IKNK +R
Sbjct: 6 EKSGGGGKRGLKRKAPAEEPQETAVASDGTAESGVQSAKAAAFPPGFSISEIKNKQRRHL 65
Query: 221 VYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPDDEE 400
++ + K + ++++K+ A+ +++ LG++ P K VPKTI+N R DET P+DEE
Sbjct: 66 MFTRWKQQ---QRKEKLAAKKKLKREREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEE 122
Query: 401 LFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKK 580
+ D DEF R+ +PK+LITT R +L +VIP+S R LKK
Sbjct: 123 VAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKK 182
Query: 581 IVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHG-NPTSH 757
I+ +D+T LIV++ +R+ P+ L++ LPNGPTAHFK+S++ LRK+IK G +PT H
Sbjct: 183 IIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEH 242
Query: 758 EPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYIFDVKED 937
PE+ILNNFTTRLG+ +GR F SLFP P F GR+V TFHNQRD+I FR HRYIF K +
Sbjct: 243 VPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF--KSE 300
Query: 938 KQSG 949
K+ G
Sbjct: 301 KKVG 304
>sp|Q5R631|RPF1_PONAB Ribosome production factor 1 OS=Pongo abelii GN=RPF1 PE=2
SV=1
Length = 349
Score = 228 bits (579), Expect = 1e-058
Identities = 119/255 (46%), Positives = 167/255 (65%), Gaps = 6/255 (2%)
Frame = +2
Query: 188 SMIKNKDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREA 367
S IKNK++R ++ + K + ++++K+ A+ +K+ LG++ P K VPKTI+N R
Sbjct: 55 SEIKNKERRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 368 DETVCRPDDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSD 547
DET P+DEE+ D DEF ++ +PK+LITT R +L +VIPNS
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 548 YRKRGTYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKD 727
R LKKI+ +D+T LIV++ +R+ P+ L++ LPNGPTAHFK+S++ LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 728 IKNHG-NPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFR 904
IK G +PT H PE+ILNNFTTRLG+ +GR F SLFP P F GR+V TFHNQRD+I FR
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 905 HHRYIFDVKEDKQSG 949
HRYIF + +K+ G
Sbjct: 292 FHRYIF--RSEKKVG 304
>sp|Q9H9Y2|RPF1_HUMAN Ribosome production factor 1 OS=Homo sapiens GN=RPF1 PE=1
SV=2
Length = 349
Score = 227 bits (577), Expect = 2e-058
Identities = 119/255 (46%), Positives = 166/255 (65%), Gaps = 6/255 (2%)
Frame = +2
Query: 188 SMIKNKDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREA 367
S IKNK +R ++ + K + ++++K+ A+ +K+ LG++ P K VPKTI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 368 DETVCRPDDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSD 547
DET P+DEE+ D DEF ++ +PK+LITT R +L +VIPNS
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 548 YRKRGTYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKD 727
R LKKI+ +D+T LIV++ +R+ P+ L++ LPNGPTAHFK+S++ LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 728 IKNHG-NPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFR 904
IK G +PT H PE+ILNNFTTRLG+ +GR F SLFP P F GR+V TFHNQRD+I FR
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 905 HHRYIFDVKEDKQSG 949
HRYIF + +K+ G
Sbjct: 292 FHRYIF--RSEKKVG 304
>sp|Q6IQU6|RPF1_DANRE Ribosome production factor 1 OS=Danio rerio GN=rpf1 PE=2
SV=1
Length = 330
Score = 225 bits (571), Expect = 9e-058
Identities = 120/255 (47%), Positives = 168/255 (65%), Gaps = 6/255 (2%)
Frame = +2
Query: 188 SMIKNKDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREA 367
S IKNK +R ++ K K EK+ +K+ ++K + E++AL+ ++ P K VPKTIEN R
Sbjct: 36 SEIKNKQRRHTMFLKLKEEKR-KKRMELKKKKKKERKALD--DKAPPKEVPKTIENQRIY 92
Query: 368 DETVCRPDDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSD 547
DET P+DEE+ D DEF+ R PKVLITT R F +L +VIP++
Sbjct: 93 DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 152
Query: 548 YRKRGTYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKD 727
R LKK++ + +T L+V++ +R+ P+ +++ LP+GPTAHFK+S++ LRK+
Sbjct: 153 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 212
Query: 728 IKNHG-NPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFR 904
+K G NPT H PE+ILNNFTTRLG+ +GR F +LFP +P F GR+V TFHNQRDFI FR
Sbjct: 213 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 272
Query: 905 HHRYIFDVKEDKQSG 949
HRYIF K +K+ G
Sbjct: 273 FHRYIF--KNEKKVG 285
>sp|P54073|YUY1_CAEEL Brix domain-containing protein F44G4.1 OS=Caenorhabditis
elegans GN=F44G4.1 PE=2 SV=4
Length = 384
Score = 217 bits (552), Expect = 1e-055
Identities = 125/306 (40%), Positives = 174/306 (56%), Gaps = 14/306 (4%)
Frame = +2
Query: 44 TNERERSDQKKRMGFKRKKGDGDGEEMEAEDNRRPSFNTAERRNVILPSMIKNKDKRAKV 223
++E E +KK++ K K +E+E D + E+ + K KD +
Sbjct: 44 SDEDEPPKKKKKVVKKEIK-----QELELTDEKLQEL--LEKYEASKATATKTKDDFKHL 96
Query: 224 YAKQKHEKKVEKQKKIKARDAAEKQAL--ELGEEPPQKMVPKTIENTREADETVCRPDDE 397
Q+ + +K K E+ + ELGE PQK VPKTIE+ RE D T+ +D+
Sbjct: 97 PKSQRGKALKRALRKDKRARQGERAQIRDELGESAPQKEVPKTIESMREYDATMVNEEDD 156
Query: 398 ELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLK 577
E+ D DEF P RE +PKV+IT F ELQ IPNS+ R LK
Sbjct: 157 EVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTFKFCFELQKCIPNSEIFTRKNVLLK 216
Query: 578 KIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSH 757
I+E AK++++T L+VVH +R++P+ ++ LP GPTA+FK+++L +D+K G TSH
Sbjct: 217 TIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAYFKINSLTFTQDLKKFGESTSH 276
Query: 758 EPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYIFDVKED 937
PE+ILNNF TRLG+ + R LFP +P F GRRVVTFHNQRD+I FRHHRY F
Sbjct: 277 FPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTFHNQRDYIFFRHHRYEF----- 331
Query: 938 KQSGAK 955
K+ G+K
Sbjct: 332 KKEGSK 337
>sp|Q9VKB4|RPF1_DROME Probable ribosome production factor 1 OS=Drosophila
melanogaster GN=CG6712 PE=2 SV=1
Length = 394
Score = 207 bits (526), Expect = 2e-052
Identities = 122/294 (41%), Positives = 174/294 (59%), Gaps = 21/294 (7%)
Frame = +2
Query: 92 RKKGDGDGEEMEAEDNRRPSFNTAERRNVILP-----SMIKNKDKRAKVYAKQKHEKKVE 256
+++ D D EE +D+ + + + +P S ++NK++R +Y K K EK +
Sbjct: 64 KEEDDDDDEEENDDDDEEEDDDDDDDKKTRIPVLNPLSWMRNKEQRLALYKKMKKEKHKK 123
Query: 257 KQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADET----VCRPDDEELFADIDAD 424
K ++ +AR A A P TIE+ RE D+T + D+EEL ++ D
Sbjct: 124 KMQERRARRKAGVPA-----NPGH-----TIESLREKDQTEVANLNDSDNEELQKELQLD 173
Query: 425 EFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEYAKKK 604
+F+ R PKVLIT T+ F EL + PN+ + R +KKI + A+++
Sbjct: 174 DFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAERE 233
Query: 605 DYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIK-NHGNPTSHEPELILNN 781
++T +++V+ +RR+P+ LL+I LPNGPTAHFKLSN+ L DIK +H T H PE+ILNN
Sbjct: 234 EFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEITKHRPEVILNN 293
Query: 782 FTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYIFDVKEDKQ 943
FTTRLG VGR +LF +P FRGRR VTFHNQRD+I FRHHRY F KE K+
Sbjct: 294 FTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEF-TKEGKR 346
>sp|O14180|YDS4_SCHPO Brix domain-containing protein C4F8.04
OS=Schizosaccharomyces pombe GN=SPAC4F8.04 PE=2 SV=1
Length = 306
Score = 201 bits (510), Expect = 1e-050
Identities = 116/270 (42%), Positives = 161/270 (59%), Gaps = 7/270 (2%)
Frame = +2
Query: 194 IKNKDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADE 373
IKNK R + Y K H+K +K ++ K R E++ E + +P TIE+ R DE
Sbjct: 4 IKNKIVRQQQYMKALHQKNKDKLERRKERAKEEEKDPEKKRLRLSENIPATIESKRVYDE 63
Query: 374 TVCR-PDDEELFADIDADEFNPVLRRE-VTPKVLITTCRFNSTRGPAFISELQSVIPNSD 547
T+ DEEL A++ DEF+ E PK+L+TT + S + F SEL PN++
Sbjct: 64 TIIEDKPDEELQAELKDDEFSAYFSEERKVPKLLVTTSKRASRKCYDFASELLDCFPNAE 123
Query: 548 YRKR-GTYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRK 724
+RKR G ++ +I E A K+ YT L+V++ +R++ +AL ++ LPNGP+ +F LSNL K
Sbjct: 124 FRKRTGDIEVHEIAEAAAKRGYTDLLVLNEDRKKTNALTLVHLPNGPSFYFTLSNLQTAK 183
Query: 725 DIKNHGNPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFR 904
+I NHG T H PELI+NNF+TRLG V R FQSLF Q P +GR+VVT H QRDF+ FR
Sbjct: 184 EISNHGRSTGHIPELIINNFSTRLGMTVARAFQSLFIQTPQIQGRQVVTIHCQRDFLFFR 243
Query: 905 HHRYIFDVKEDKQSGAKGKDGVAKERVKPR 994
HRY F K + G G + + PR
Sbjct: 244 RHRYAFREKSNMPDGI----GTGLQELGPR 269
>sp|P38805|RPF1_YEAST Ribosome production factor 1 OS=Saccharomyces cerevisiae
GN=RPF1 PE=1 SV=1
Length = 295
Score = 187 bits (474), Expect = 2e-046
Identities = 103/251 (41%), Positives = 150/251 (59%), Gaps = 11/251 (4%)
Frame = +2
Query: 194 IKNKDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADE 373
I NK KR +++A KHEK E+ + R E++ EL E+ ++ V +TIENTR DE
Sbjct: 9 ITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDE 68
Query: 374 TVCRP---DDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNS 544
T+ + D+++L +++ P PK+ +TT F + L ++PN
Sbjct: 69 TINKEVEGDEDDLMRYFNSNSNEP-------PKIFLTTNVNAKKSAYEFANILIEILPNV 121
Query: 545 DYRKRG-TYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLR 721
+ KR Y LK+I + K+++T +++++ ++++ L I LP GPT +FKLS+ V
Sbjct: 122 TFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEV 181
Query: 722 KDIKNHGNPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILF 901
K I HG PTSH PELILNNF TRLG VGR FQS+ PQ P+ GR+V+T HNQRD+I F
Sbjct: 182 KKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFF 241
Query: 902 RHHRYIFDVKE 934
R HRY+F E
Sbjct: 242 RRHRYVFKDNE 252
>sp|Q755T8|IMP4_ASHGO U3 small nucleolar ribonucleoprotein protein IMP4
OS=Ashbya gossypii GN=IMP4 PE=3 SV=1
Length = 283
Score = 136 bits (342), Expect = 3e-031
Identities = 88/234 (37%), Positives = 125/234 (53%), Gaps = 10/234 (4%)
Frame = +2
Query: 227 AKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPD---DE 397
A+++ E K ++++ +K+ L K +PK + AD+T + D DE
Sbjct: 6 ARERREYLYRKAQELQESQLQQKRDLIKQALAQGKPLPKEV-----ADDTKLQRDYQYDE 60
Query: 398 ELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLK 577
ID DE++ L V PKV++TT R STR F E++ + P S RG Y +K
Sbjct: 61 SAQESID-DEYS-ALSGIVDPKVIVTTSRDPSTRLSQFAKEVKLLFPTSVRLNRGNYIMK 118
Query: 578 KIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSH 757
+V+ +K T L+V+H +R P AL I P+GPTA F L N+VLR DI N GN +
Sbjct: 119 NLVDACQKSGTTDLVVLHEHRGVPTALTISHFPHGPTASFSLHNVVLRHDILNAGNQSEV 178
Query: 758 EPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYI 919
P LI +NFTT LG RV + + +FP RV+TF N+ DFI R H Y+
Sbjct: 179 HPHLIFDNFTTPLGQRVVKILKHMFPPGVKRDSPRVITFANRGDFISVRQHVYV 232
>sp|O13823|IMP4_SCHPO U3 small nucleolar ribonucleoprotein protein imp4
OS=Schizosaccharomyces pombe GN=imp4 PE=2 SV=1
Length = 289
Score = 136 bits (342), Expect = 3e-031
Identities = 84/220 (38%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Frame = +2
Query: 257 KQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPDDEELFADIDADEFNP 436
++ K+ + A ++ALE G + K + + + ++ R EE ++D DE++
Sbjct: 21 QEAKLNEKRRALRKALE-GNKELNKDLQEDSQLQKDYKYDESRATQEETETNLD-DEYHR 78
Query: 437 VLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEYAKKKDYTS 616
+ RE PKVL+TT R S+R F E++ +IPNS RG + +VE A+ D T
Sbjct: 79 LGERE--PKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRGNIVVGSLVEAARANDITD 136
Query: 617 LIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELILNNFTTRL 796
++++H +R PD L+I LP GPT F L N+VLR DI N G + P LI N T++L
Sbjct: 137 IVILHEHRGIPDGLVISHLPYGPTLSFSLHNVVLRHDIPNTGTMSEAYPHLIFENLTSKL 196
Query: 797 GNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
G RV +LFP +P RVVTF N D+I FRHH Y
Sbjct: 197 GKRVKTALSALFPPDPKDTTPRVVTFANTDDYISFRHHIY 236
>sp|P53941|IMP4_YEAST U3 small nucleolar ribonucleoprotein protein IMP4
OS=Saccharomyces cerevisiae GN=IMP4 PE=1 SV=1
Length = 290
Score = 136 bits (341), Expect = 4e-031
Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 21/288 (7%)
Frame = +2
Query: 203 KDKRAKVYAKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMV-PKTIENTREADETV 379
+++R +Y K + + + Q+K + KQAL G+ P+++ ++++ D+++
Sbjct: 7 RERREYLYRKAQELQDSQLQQKRQ----IIKQALAQGKPLPKELAEDESLQKDFRYDQSL 62
Query: 380 CRPDDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKR 559
++ + D+ D+ + P++++TT R STR F E++ + PN+ R
Sbjct: 63 KESEEAD---DLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNR 119
Query: 560 GTYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNH 739
G Y + +V+ KK T L+V+H +R P +L I P+GPTA F L N+V+R DI N
Sbjct: 120 GNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINA 179
Query: 740 GNPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYI 919
GN + P LI +NFTT LG RV + LF P RV+TF N+ DFI R H Y+
Sbjct: 180 GNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVYV 239
Query: 920 FDVKEDKQSGAKGKDGVAKERVKPRLQECGPKFTLKLVTLQHGTFDTK 1063
+ ++GV V PR + F L+L TL++ D +
Sbjct: 240 -----------RTREGVEIAEVGPRFEM--RLFELRLGTLENKDADVE 274
>sp|Q6FNN7|IMP4_CANGA U3 small nucleolar ribonucleoprotein protein IMP4
OS=Candida glabrata GN=IMP4 PE=3 SV=1
Length = 288
Score = 132 bits (332), Expect = 5e-030
Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 7/239 (2%)
Frame = +2
Query: 209 KRAKVYAKQKHEKKVEKQK-KIKARDAAEKQALELGEEPPQKMV-PKTIENTREADETVC 382
++A+ + + K E Q+ +++ + KQAL G+ P+++ + ++ D+++
Sbjct: 4 RQARERREYLYRKAQELQETQLQQKRQIIKQALAQGKPLPKELAEDEQLQKDFRYDQSMA 63
Query: 383 RPDDEELFADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRG 562
+DE A +D DE++ V +V++TT R S+R F E++ + PN+ RG
Sbjct: 64 DNEDE---AGVD-DEYS-ASSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLNRG 118
Query: 563 TYDLKKIVEYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHG 742
Y + +V KK T LIV+H +R P +L + P GPTA F L N+VLR DI N G
Sbjct: 119 NYVMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILNRG 178
Query: 743 NPTSHEPELILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYI 919
N + P LI +NFTT LGNRV ++LFP P RV+TF N+ DFI R H Y+
Sbjct: 179 NQSEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYV 237
>sp|O62518|YHPK_CAEEL Brix domain-containing protein ZK795.3 OS=Caenorhabditis
elegans GN=ZK795.3 PE=2 SV=1
Length = 292
Score = 127 bits (318), Expect = 2e-028
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = +2
Query: 458 PKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEYAKKKDYTSLIVVHTN 637
PK++ITT R S+R F E++ + PN+ RG YD+K++V+ +K +D T LI+
Sbjct: 78 PKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQASKAQDSTDLIIFTET 137
Query: 638 RREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELILNNFTTRLGNRVGRF 817
R PD +L+ LP GPTA F ++N+V+R DI N G + P LI +N ++LG+R
Sbjct: 138 RGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGHRFTTI 197
Query: 818 FQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
+ LFP P +R++TF N D+I FRHH Y
Sbjct: 198 LKHLFP-VPKPDSKRIITFSNSEDYISFRHHVY 229
>sp|Q0VD01|IMP4_BOVIN U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos
taurus GN=IMP4 PE=2 SV=1
Length = 291
Score = 125 bits (312), Expect = 1e-027
Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 12/223 (5%)
Frame = +2
Query: 272 KARDAAEKQALELGEE-----PPQKMVPKTIENTREADETVCRPDD---EELFADIDADE 427
KAR+ AE+ A E ++ +++P + A + DD E + +D DE
Sbjct: 16 KAREEAERTAQERKDKVRRALEENRLIPTELRREALALQGSLEFDDAGGEGVTNHVD-DE 74
Query: 428 FNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEYAKKKD 607
+ + PKV+ITT R S+R F EL+ V P + RG +++ +V K
Sbjct: 75 YRWAGVED--PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANG 132
Query: 608 YTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELILNNFT 787
T L+VVH +R P L++ LP GPTA+F L N+V+R DI + G + +P LI++ F+
Sbjct: 133 VTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFS 192
Query: 788 TRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
+RLG RV + LFP P RRV+TF NQ D+I FRHH Y
Sbjct: 193 SRLGKRVSDILRYLFP-VPKDDSRRVITFANQDDYISFRHHVY 234
>sp|Q8VHZ7|IMP4_MOUSE U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus
musculus GN=Imp4 PE=2 SV=1
Length = 291
Score = 124 bits (310), Expect = 2e-027
Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 20/228 (8%)
Frame = +2
Query: 254 EKQKKIKARDAAEKQALELGEEPPQKMVPK--TIENTREADE-----TVCRPDDEELFAD 412
E Q+ ++ + K+ALE + P ++ + ++ + E D+ DDE +A
Sbjct: 20 EAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAG 79
Query: 413 IDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEY 592
++ PKV+ITT R S+R F EL+ V P + RG +++ +V
Sbjct: 80 VE------------DPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRA 127
Query: 593 AKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELI 772
K T L+VVH +R P L++ LP GPTA+F L N+V+R DI + G + +P LI
Sbjct: 128 CKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLI 187
Query: 773 LNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
+ F++RLG RV + LFP P RV+TF NQ D+I FRHH Y
Sbjct: 188 THGFSSRLGKRVSDILRYLFP-VPKDDSHRVITFANQDDYISFRHHVY 234
>sp|Q5PQR5|IMP4_RAT U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus
norvegicus GN=Imp4 PE=2 SV=1
Length = 291
Score = 124 bits (310), Expect = 2e-027
Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 20/228 (8%)
Frame = +2
Query: 254 EKQKKIKARDAAEKQALELGEEPPQKMVPK--TIENTREADE-----TVCRPDDEELFAD 412
E Q+ ++ + K+ALE + P ++ + ++ + E D+ DDE +A
Sbjct: 20 EAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAG 79
Query: 413 IDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEY 592
++ PKV+ITT R S+R F EL+ V P + RG +++ +V
Sbjct: 80 VE------------DPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRA 127
Query: 593 AKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELI 772
K T L+VVH +R P L++ LP GPTA+F L N+V+R DI + G + +P LI
Sbjct: 128 CKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLI 187
Query: 773 LNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
+ F++RLG RV + LFP P RV+TF NQ D+I FRHH Y
Sbjct: 188 THGFSSRLGKRVSDILRYLFP-VPKDDSHRVITFANQDDYISFRHHVY 234
>sp|Q6C804|IMP4_YARLI U3 small nucleolar ribonucleoprotein protein IMP4
OS=Yarrowia lipolytica GN=IMP4 PE=3 SV=1
Length = 283
Score = 124 bits (310), Expect = 2e-027
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 4/231 (1%)
Frame = +2
Query: 227 AKQKHEKKVEKQKKIKARDAAEKQALELGEEPPQKMVPKTIENTREADETVCRPDDEELF 406
A+++ E K +++ +K+ K +PK + + E +T+ DE +
Sbjct: 6 ARERREYLYRKSLQLQEATKIQKRQQLKAALASGKPLPKDVADDEELRKTIAY--DESVQ 63
Query: 407 ADIDADEFNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIV 586
+ID DE++ + PKV++TT R STR F E++ + P S RG L +V
Sbjct: 64 DEID-DEYS-AMSGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSIRLNRGGTVLPSLV 121
Query: 587 EYAKKKDYTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPE 766
K + LIV+H +R P A+ + P+GPTA+F L N+VLR D+ + GN + P
Sbjct: 122 SACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHDLPDTGNMSEVHPH 181
Query: 767 LILNNFTTRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRYI 919
LI +NFTT LG RV + + LFP RV+TF N+ DFI R H Y+
Sbjct: 182 LIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQHVYV 232
>sp|Q96G21|IMP4_HUMAN U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo
sapiens GN=IMP4 PE=1 SV=1
Length = 291
Score = 122 bits (306), Expect = 5e-027
Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 12/223 (5%)
Frame = +2
Query: 272 KARDAAEKQALELGEE-----PPQKMVPKTIENTREADETVCRPDD---EELFADIDADE 427
KAR+ A++ A E E +++P + A + DD E + + +D DE
Sbjct: 16 KAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFDDAGGEGVTSHVD-DE 74
Query: 428 FNPVLRREVTPKVLITTCRFNSTRGPAFISELQSVIPNSDYRKRGTYDLKKIVEYAKKKD 607
+ + PKV+ITT R S+R F EL+ V P + RG +++ +V K
Sbjct: 75 YRWAGVED--PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANG 132
Query: 608 YTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHEPELILNNFT 787
T L+VVH +R P L++ LP GPTA+F L N+V+R DI + G + +P LI + F+
Sbjct: 133 VTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFS 192
Query: 788 TRLGNRVGRFFQSLFPQEPNFRGRRVVTFHNQRDFILFRHHRY 916
+RLG RV + LFP P RV+TF NQ D+I FRHH Y
Sbjct: 193 SRLGKRVSDILRYLFP-VPKDDSHRVITFANQDDYISFRHHVY 234
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,759,707,213
Number of Sequences: 518415
Number of Extensions: 54759707213
Number of Successful Extensions: 366332288
Number of sequences better than 0.0: 0
|
