BLASTX 7.6.2
Query= UN13503 /QuerySize=6365
(6364 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATCG00800.1 | Symbols: | encodes a chloroplast r... 430 8e-120
TAIR9_protein||ATCG00810.1 | Symbols: RPL22 | encodes a chloropl... 317 7e-086
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 292 2e-078
TAIR9_protein||ATCG00860.1 | Symbols: YCF2.1 | Encodes an unknow... 292 2e-078
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 292 2e-078
TAIR9_protein||ATCG01280.1 | Symbols: YCF2.2 | hypothetical prot... 292 2e-078
TAIR9_protein||ATCG00790.1 | Symbols: RPL16 | chloroplast gene e... 264 6e-070
TAIR9_protein||ATCG00780.1 | Symbols: RPL14 | encodes a chloropl... 237 9e-062
TAIR9_protein||ATCG00840.1 | Symbols: RPL23.1, RPL23 | One of tw... 194 9e-049
TAIR9_protein||ATCG01300.1 | Symbols: RPL23.2 | One of two chlor... 194 9e-049
TAIR9_protein||AT2G28830.1 | Symbols: | binding / structural co... 193 2e-048
TAIR9_protein||ATCG00820.1 | Symbols: RPS19 | Encodes a 6.8-kDa ... 189 3e-047
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 121 8e-027
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 121 8e-027
TAIR9_protein||AT5G46160.1 | Symbols: | ribosomal protein L14 f... 102 3e-021
TAIR9_protein||AT5G46160.2 | Symbols: | ribosomal protein L14 f... 102 3e-021
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 87 1e-016
TAIR9_protein||ATMG00080.1 | Symbols: RPL16 | encodes a mitochon... 86 4e-016
>TAIR9_protein||ATCG00800.1 | Symbols: | encodes a chloroplast ribosomal
protein S3, a constituent of the small subunit of the ribosomal complex
| chrC:82826-83482 REVERSE
Length = 219
Score = 430 bits (1104), Expect = 8e-120
Identities = 213/219 (97%), Positives = 216/219 (98%)
Frame = -3
Query: 2915 MGQKINPLGFRLGTTQSHHSIWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 2736
MGQKINPLGFRLGTTQSHHS+WFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 2735 ARIEIQKRIDLVQIIIYMGFPKLLIEDKPRRIEELQMNVQKELNCANRKLNIAITRISNP 2556
ARIEIQKRIDL+QIIIYMGFPKLLIEDKPRR+EELQMNVQKELNC NRKLNIAITRISNP
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120
Query: 2555 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 2376
YG PNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 2375 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE* 2259
EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE*
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE* 219
>TAIR9_protein||ATCG00810.1 | Symbols: RPL22 | encodes a chloroplast ribosomal
protein L22, a constituent of the large subunit of the ribosomal
complex | chrC:83467-83949 REVERSE
Length = 161
Score = 317 bits (811), Expect = 7e-086
Identities = 154/161 (95%), Positives = 156/161 (96%)
Frame = -1
Query: 3382 MIKKKKKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL 3203
MIKK+KKKSYT VYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL
Sbjct: 1 MIKKRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL 60
Query: 3202 VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSFPIKRSTCHITIVLEDI 3023
VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRS+PIKRSTCHITIVLEDI
Sbjct: 61 VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDI 120
Query: 3022 SLYQQYEEYLMYFKKPGCSNENINLTCYDTYSSGGLWDKK* 2900
S YQQYEEYLMY KKPGCSNEN NLTCYDTYSSGGLWDKK*
Sbjct: 121 SFYQQYEEYLMYLKKPGCSNENRNLTCYDTYSSGGLWDKK* 161
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 292 bits (746), Expect = 2e-078
Identities = 143/145 (98%), Positives = 144/145 (99%)
Frame = -3
Query: 4214 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV 4035
TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV
Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV 190
Query: 4034 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY 3855
GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY
Sbjct: 191 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY 250
Query: 3854 PALGRRTRKRKKYSETLILRRRSK* 3780
PALGRRTRKRKKYSETLILRRRSK*
Sbjct: 251 PALGRRTRKRKKYSETLILRRRSK* 275
Score = 267 bits (682), Expect = 7e-071
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = -2
Query: 5286 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITVRHRGGGHKRLY 5107
MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQHHCGKGRNARGIIT RHRGGGHKRLY
Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60
Query: 5106 RKIDFRRNTKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 4927
RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61 RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
Query: 4926 PIKMGNALPLS 4894
PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131
>TAIR9_protein||ATCG00860.1 | Symbols: YCF2.1 | Encodes an unknown protein. This
gene is regulated by AtSIG6 transcriptionally. | chrC:86474-93358
FORWARD
Length = 2295
Score = 292 bits (746), Expect = 2e-078
Identities = 145/149 (97%), Positives = 147/149 (98%)
Frame = +1
Query: 5917 MKGHQFKSWIFELREIVREIKNSHYFLDSWTQINSVGSFIHIFFHQERFRKLLDPRIFSI 6096
MKGHQFKSWIFELREIVREIKN+HYFLDSWTQ NSVGSFIHIFFHQERFRKLLDPRIFSI
Sbjct: 1 MKGHQFKSWIFELREIVREIKNAHYFLDSWTQFNSVGSFIHIFFHQERFRKLLDPRIFSI 60
Query: 6097 LLLRNSQGSTSNRYFTIKGVLLFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN 6276
LLLRNSQGSTSNRYFTIKGV+LFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN
Sbjct: 61 LLLRNSQGSTSNRYFTIKGVVLFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN 120
Query: 6277 DTSEESFGSSNINRLIVSLLYLTKGKKIS 6363
DTSEESFGS NINRLIVSLLYLTKGKKIS
Sbjct: 121 DTSEESFGSCNINRLIVSLLYLTKGKKIS 149
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 292 bits (746), Expect = 2e-078
Identities = 143/145 (98%), Positives = 144/145 (99%)
Frame = -3
Query: 4214 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV 4035
TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV
Sbjct: 131 TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV 190
Query: 4034 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY 3855
GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY
Sbjct: 191 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY 250
Query: 3854 PALGRRTRKRKKYSETLILRRRSK* 3780
PALGRRTRKRKKYSETLILRRRSK*
Sbjct: 251 PALGRRTRKRKKYSETLILRRRSK* 275
Score = 267 bits (682), Expect = 7e-071
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = -2
Query: 5286 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITVRHRGGGHKRLY 5107
MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQHHCGKGRNARGIIT RHRGGGHKRLY
Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60
Query: 5106 RKIDFRRNTKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 4927
RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61 RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
Query: 4926 PIKMGNALPLS 4894
PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131
>TAIR9_protein||ATCG01280.1 | Symbols: YCF2.2 | hypothetical protein |
chrC:145291-152175 REVERSE
Length = 2295
Score = 292 bits (746), Expect = 2e-078
Identities = 145/149 (97%), Positives = 147/149 (98%)
Frame = +1
Query: 5917 MKGHQFKSWIFELREIVREIKNSHYFLDSWTQINSVGSFIHIFFHQERFRKLLDPRIFSI 6096
MKGHQFKSWIFELREIVREIKN+HYFLDSWTQ NSVGSFIHIFFHQERFRKLLDPRIFSI
Sbjct: 1 MKGHQFKSWIFELREIVREIKNAHYFLDSWTQFNSVGSFIHIFFHQERFRKLLDPRIFSI 60
Query: 6097 LLLRNSQGSTSNRYFTIKGVLLFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN 6276
LLLRNSQGSTSNRYFTIKGV+LFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN
Sbjct: 61 LLLRNSQGSTSNRYFTIKGVVLFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRN 120
Query: 6277 DTSEESFGSSNINRLIVSLLYLTKGKKIS 6363
DTSEESFGS NINRLIVSLLYLTKGKKIS
Sbjct: 121 DTSEESFGSCNINRLIVSLLYLTKGKKIS 149
>TAIR9_protein||ATCG00790.1 | Symbols: RPL16 | chloroplast gene encoding a
ribosomal protein L16, which is a constituent of 50S large ribosomal
subunit | chrC:81189-82652 REVERSE
Length = 136
Score = 264 bits (674), Expect = 6e-070
Identities = 128/134 (95%), Positives = 131/134 (97%)
Frame = -3
Query: 983 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMIRNIRRGG 804
+PKRT+FRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAM RN+RRGG
Sbjct: 3 SPKRTRFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGG 62
Query: 803 KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAA 624
KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAA
Sbjct: 63 KIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAA 122
Query: 623 SKMPIKTQFIICE* 582
SKMPIKTQFII E*
Sbjct: 123 SKMPIKTQFIISE* 136
>TAIR9_protein||ATCG00780.1 | Symbols: RPL14 | encodes a chloroplast ribosomal
protein L14, a constituent of the large subunit of the ribosomal
complex | chrC:80696-81064 REVERSE
Length = 123
Score = 237 bits (603), Expect = 9e-062
Identities = 120/123 (97%), Positives = 121/123 (98%)
Frame = -2
Query: 465 MIQPQTYLNVADNSGARKLMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 286
MIQPQTYLNVADNSGAR+LMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1 MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 60
Query: 285 VIVRTCKELKRKNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 106
VIVRTCKELKR NGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE
Sbjct: 61 VIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 120
Query: 105 VL* 97
VL*
Sbjct: 121 VL* 123
>TAIR9_protein||ATCG00840.1 | Symbols: RPL23.1, RPL23 | One of two chloroplast
genes that encode chloroplast ribosomal protein L23, a constituent of
the large subunit of the ribosomal complex | chrC:85862-86143 REVERSE
Length = 94
Score = 194 bits (491), Expect = 9e-049
Identities = 93/94 (98%)
Frame = -2
Query: 5586 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK 5407
MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK
Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK 60
Query: 5406 RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT* 5305
RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT*
Sbjct: 61 RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT* 94
>TAIR9_protein||ATCG01300.1 | Symbols: RPL23.2 | One of two chloroplast genes
that encode chloroplast ribosomal protein L23, a constituent of the
large subunit of the ribosomal complex | chrC:152506-152787 FORWARD
Length = 94
Score = 194 bits (491), Expect = 9e-049
Identities = 93/94 (98%)
Frame = -2
Query: 5586 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK 5407
MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK
Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVK 60
Query: 5406 RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT* 5305
RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT*
Sbjct: 61 RMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT* 94
>TAIR9_protein||AT2G28830.1 | Symbols: | binding / structural constituent of
ribosome / ubiquitin-protein ligase | chr2:12367001-12370608 REVERSE
Length = 963
Score = 193 bits (489), Expect = 2e-048
Identities = 101/141 (71%), Positives = 116/141 (82%), Gaps = 3/141 (2%)
Frame = -3
Query: 1001 KKPINYNPKRTKFRKQHRGRL-KGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMI 825
K I+ P+RTKF+K HRGR+ KG+SS+G IC RYALQTLEPAWITSRQIEAGRRAM
Sbjct: 825 KSSISDIPRRTKFQKHHRGRINKGVSSQG-YIC-SRYALQTLEPAWITSRQIEAGRRAMT 882
Query: 824 RNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIAR 645
RNI RG + V IF DKPVTVRP ETRMG GKG+P +WVAVVKPGKI+YEMGGV E +AR
Sbjct: 883 RNIGRGLTVRVHIFADKPVTVRPPETRMGRGKGAPAFWVAVVKPGKIIYEMGGVSEKVAR 942
Query: 644 KAISIAASKMPIKTQFIICE* 582
+AISIAASK+P KT+FII +*
Sbjct: 943 EAISIAASKLPAKTKFIISK* 963
>TAIR9_protein||ATCG00820.1 | Symbols: RPS19 | Encodes a 6.8-kDa protein of the
small ribosomal subunit. | chrC:84005-84283 REVERSE
Length = 93
Score = 189 bits (478), Expect = 3e-047
Identities = 92/93 (98%)
Frame = -1
Query: 3724 VTRSLKKNPFVAKHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPV 3545
VTRSLKKNPFVAKHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPV
Sbjct: 1 VTRSLKKNPFVAKHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPV 60
Query: 3544 YIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR* 3446
YIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR*
Sbjct: 61 YIIDLMVGHKLGEFSPTINFRGHAKNDNRSRR* 93
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 121 bits (302), Expect = 8e-027
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 8/138 (5%)
Frame = -3
Query: 4208 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 4032
M +GT IHNIE+ G+G ++ RAAG AK++ + K L KLPSG+ + I+ C AT+G
Sbjct: 68 MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127
Query: 4031 QVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK---PVTPW 3861
V N K L +AG WLG RP VRGV MNP DHPHGGGEG++ + V+PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187
Query: 3860 GYPALG----RRTRKRKK 3819
G P G +K+KK
Sbjct: 188 GKPCKGGYKSASVKKKKK 205
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 121 bits (302), Expect = 8e-027
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 8/138 (5%)
Frame = -3
Query: 4208 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 4032
M +GT IHNIE+ G+G ++ RAAG AK++ + K L KLPSG+ + I+ C AT+G
Sbjct: 68 MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127
Query: 4031 QVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK---PVTPW 3861
V N K L +AG WLG RP VRGV MNP DHPHGGGEG++ + V+PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187
Query: 3860 GYPALG----RRTRKRKK 3819
G P G +K+KK
Sbjct: 188 GKPCKGGYKSASVKKKKK 205
>TAIR9_protein||AT5G46160.1 | Symbols: | ribosomal protein L14 family protein /
huellenlos paralog (HLP) | chr5:18711456-18712341 REVERSE
Length = 174
Score = 102 bits (254), Expect = 3e-021
Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 9/134 (6%)
Frame = -2
Query: 483 KKRYKNMIQPQTYLNVADNSGARKLMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLER 304
+++ + IQ T L V DNSGA+K+MCI+ + ++ A +GD IVA +KEA+PN +++
Sbjct: 41 QQQRRTFIQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKK 98
Query: 303 SEVIRAVIVRTCKELKRKNGTIIRYDDNAAVVIDQ-------EGNPKGTRVFGAIPRELR 145
V+ V+VR + R +G+ +R+DDNA V++D + P GTRVFG +P ELR
Sbjct: 99 GAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELR 158
Query: 144 QLNFTKIVSLAPEV 103
+ KI++LA V
Sbjct: 159 KKKHLKILALAQHV 172
>TAIR9_protein||AT5G46160.2 | Symbols: | ribosomal protein L14 family protein /
huellenlos paralog (HLP) | chr5:18711456-18712341 REVERSE
Length = 173
Score = 102 bits (254), Expect = 3e-021
Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 9/134 (6%)
Frame = -2
Query: 483 KKRYKNMIQPQTYLNVADNSGARKLMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLER 304
+++ + IQ T L V DNSGA+K+MCI+ + ++ A +GD IVA +KEA+PN +++
Sbjct: 40 QQQRRTFIQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKK 97
Query: 303 SEVIRAVIVRTCKELKRKNGTIIRYDDNAAVVIDQ-------EGNPKGTRVFGAIPRELR 145
V+ V+VR + R +G+ +R+DDNA V++D + P GTRVFG +P ELR
Sbjct: 98 GAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELR 157
Query: 144 QLNFTKIVSLAPEV 103
+ KI++LA V
Sbjct: 158 KKKHLKILALAQHV 171
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 87 bits (214), Expect = 1e-016
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 15/112 (13%)
Frame = -3
Query: 4208 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATV 4035
+P G I N+E+ +G G LARA+G A +IA +S T +KLPSG +++ C A +
Sbjct: 108 IPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMI 167
Query: 4034 GQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 3906
GQV G +K L +AG+ CW PVVRGV MNPV+HPHGGG
Sbjct: 168 GQVAGGGRTEKPLLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPHGGG 215
>TAIR9_protein||ATMG00080.1 | Symbols: RPL16 | encodes a mitochondrial ribosomal
protein L16, which is a constituent of the large ribosomal subunit |
chrM:25076-25615 REVERSE
Length = 180
Score = 86 bits (210), Expect = 4e-016
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Frame = -3
Query: 977 KRTKFRK-------QHRGRLKGISSRGNRIC-FGRYALQTLEPAWITSRQIEAG--RRAM 828
K +K+RK + G G G + C GR + + +E A R+ G RAM
Sbjct: 43 KYSKYRKGRCSRGCKPDGTKLGFGRYGTKSCKAGRLSYRAIEAA----RRAIIGHFHRAM 98
Query: 827 IRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIA 648
RR GKIWVR+F D P+T +P E RMG GKG+P W+A V G+I +EM GV A
Sbjct: 99 SGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLANA 158
Query: 647 RKAISIAASKMPIKTQFI 594
R+A ++AA K T+F+
Sbjct: 159 RQAATLAAHKPCSSTKFV 176
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,144,605,207
Number of Sequences: 33410
Number of Extensions: 7144605207
Number of Successful Extensions: 248532340
Number of sequences better than 0.0: 0
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