BLASTX 7.6.2
Query= UN13509 /QuerySize=728
(727 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 250 2e-064
gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Ara... 250 2e-064
gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungie... 249 4e-064
gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungie... 245 8e-063
gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT... 243 2e-062
gi|145323962|ref|NP_001077570.1| high mobility group B3 protein ... 241 9e-062
gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Ara... 235 5e-060
gi|145323960|ref|NP_001077569.1| high mobility group B2 protein ... 232 5e-059
gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [G... 229 4e-058
gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [... 228 6e-058
gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [G... 226 4e-057
gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [G... 216 3e-054
gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, puta... 215 7e-054
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis ... 194 1e-047
gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa] 194 2e-047
gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum ... 191 8e-047
gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [... 191 1e-046
gi|224081483|ref|XP_002306429.1| high mobility group family [Pop... 191 1e-046
gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum] 188 7e-046
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 250 bits (636), Expect = 2e-064
Identities = 122/141 (86%), Positives = 133/141 (94%), Gaps = 1/141 (0%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKG KSKA+T+S+KL+V KKPAK +K AAKDPNKPKRPSSAFFVFMEDFR TYK++HP N
Sbjct: 522 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 581
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGG+KWKSLSD+EKAPYVAKAD RKVEYEKNMKAYNKKLEEGPKED EESDK
Sbjct: 582 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EESDK 640
Query: 470 SVSEVNDEDDADDGSDEEEDD 532
SVSEVNDEDDA+DGS+EEEDD
Sbjct: 641 SVSEVNDEDDAEDGSEEEEDD 661
Score = 228 bits (579), Expect = 1e-057
Identities = 114/145 (78%), Positives = 128/145 (88%), Gaps = 4/145 (2%)
Frame = +2
Query: 95 QKNRAMKGGKSKADTKSSKLAVNKKPAKAS---KAAAKDPNKPKRPSSAFFVFMEDFRQT 265
Q MKG KSK +T+SSKL+V KKPAK + KAAAKDPNKPKRP+SAFFVFMEDFR+T
Sbjct: 373 QPESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRET 432
Query: 266 YKKDHPNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPK 445
+KK++P NKSVA VGKA G KWKSLSD+EKAPYVAKA+ RKVEYEKN+KAYNKKLEEGPK
Sbjct: 433 FKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPK 492
Query: 446 EDEEESDKSVSEVNDEDDADDGSDE 520
ED EESDKSVSEVNDEDDA+DGS+E
Sbjct: 493 ED-EESDKSVSEVNDEDDAEDGSEE 516
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis
thaliana]
Length = 141
Score = 250 bits (636), Expect = 2e-064
Identities = 122/141 (86%), Positives = 133/141 (94%), Gaps = 1/141 (0%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKG KSKA+T+S+KL+V KKPAK +K AAKDPNKPKRPSSAFFVFMEDFR TYK++HP N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGG+KWKSLSD+EKAPYVAKAD RKVEYEKNMKAYNKKLEEGPKED EESDK
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EESDK 119
Query: 470 SVSEVNDEDDADDGSDEEEDD 532
SVSEVNDEDDA+DGS+EEEDD
Sbjct: 120 SVSEVNDEDDAEDGSEEEEDD 140
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 249 bits (634), Expect = 4e-064
Identities = 121/141 (85%), Positives = 131/141 (92%), Gaps = 1/141 (0%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKGGKSK +T+SSKL+VNKKP K K AAKDPNKPKRP+SAFFVFME+FR+TYKK+HPNN
Sbjct: 1 MKGGKSKTETRSSKLSVNKKPTKGGKGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNN 60
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGGQKWKSLSD+EKAPY AKAD RKVEYEKNM AYNKK EEGPKED EESDK
Sbjct: 61 KSVAAVGKAGGQKWKSLSDSEKAPYQAKADKRKVEYEKNMNAYNKKQEEGPKED-EESDK 119
Query: 470 SVSEVNDEDDADDGSDEEEDD 532
SVSEV+DEDDA+DGSDEEEDD
Sbjct: 120 SVSEVHDEDDAEDGSDEEEDD 140
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 245 bits (623), Expect = 8e-063
Identities = 122/144 (84%), Positives = 132/144 (91%), Gaps = 4/144 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKA---SKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKGGKSK +T+SSKL+V KKPAK SKAAAKDPNKPKRP+SAFFVFMEDFR+T+KK+H
Sbjct: 1 MKGGKSKTETRSSKLSVTKKPAKGAGRSKAAAKDPNKPKRPASAFFVFMEDFRETFKKEH 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEE 460
P NKSVAAVGKA G KWKSLSD EKAPYVAKA+ RKV+YEKNMKAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVAAVGKAAGDKWKSLSDAEKAPYVAKAEKRKVDYEKNMKAYNKKLEEGPKED-EE 119
Query: 461 SDKSVSEVNDEDDADDGSDEEEDD 532
SDKSVSEVNDEDDA+DGSDEEEDD
Sbjct: 120 SDKSVSEVNDEDDAEDGSDEEEDD 143
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304
[Arabidopsis lyrata subsp. lyrata]
Length = 141
Score = 243 bits (620), Expect = 2e-062
Identities = 118/137 (86%), Positives = 129/137 (94%), Gaps = 1/137 (0%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKGGKSK +T+++KL+V KKPAK K AAKDPNKPKRPSSAFFVFMEDFR+TYKK+HP N
Sbjct: 3 MKGGKSKTETRNAKLSVTKKPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHPKN 62
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGG+KWKSLSD+EKAPYVAKAD RKVEYEKNMKAYNKKLEEGPKED EESDK
Sbjct: 63 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EESDK 121
Query: 470 SVSEVNDEDDADDGSDE 520
SVSEVNDEDDA+DGS+E
Sbjct: 122 SVSEVNDEDDAEDGSEE 138
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis
thaliana]
Length = 140
Score = 241 bits (614), Expect = 9e-062
Identities = 118/137 (86%), Positives = 129/137 (94%), Gaps = 1/137 (0%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKG KSKA+T+S+KL+V KKPAK +K AAKDPNKPKRPSSAFFVFMEDFR TYK++HP N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGG+KWKSLSD+EKAPYVAKAD RKVEYEKNMKAYNKKLEEGPKED EESDK
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EESDK 119
Query: 470 SVSEVNDEDDADDGSDE 520
SVSEVNDEDDA+DGS+E
Sbjct: 120 SVSEVNDEDDAEDGSEE 136
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis
thaliana]
Length = 144
Score = 235 bits (599), Expect = 5e-060
Identities = 117/144 (81%), Positives = 131/144 (90%), Gaps = 4/144 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKAS---KAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKG KSK +T+SSKL+V KKPAK + KAAAKDPNKPKRP+SAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEE 460
P NKSVA VGKA G KWKSLSD+EKAPYVAKA+ RKVEYEKN+KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 461 SDKSVSEVNDEDDADDGSDEEEDD 532
SDKSVSEVNDEDDA+DGS+EEEDD
Sbjct: 120 SDKSVSEVNDEDDAEDGSEEEEDD 143
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis
thaliana]
Length = 143
Score = 232 bits (590), Expect = 5e-059
Identities = 115/143 (80%), Positives = 130/143 (90%), Gaps = 4/143 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKAS---KAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKG KSK +T+SSKL+V KKPAK + KAAAKDPNKPKRP+SAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEE 460
P NKSVA VGKA G KWKSLSD+EKAPYVAKA+ RKVEYEKN+KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 461 SDKSVSEVNDEDDADDGSDEEED 529
SDKSVSEVNDEDDA+DGS+EE+D
Sbjct: 120 SDKSVSEVNDEDDAEDGSEEEDD 142
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium
hirsutum]
Length = 142
Score = 229 bits (582), Expect = 4e-058
Identities = 109/142 (76%), Positives = 125/142 (88%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKGGKSK+DTKS+KL+V K K S AAKDPNKPKRP+SAFFVFME+FR+ YKKDHP N
Sbjct: 1 MKGGKSKSDTKSAKLSVKSKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKDHPKN 60
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEESDK 469
KSVAAVGKAGG KWKSLS+ EKAPYVAKA+ RKVEYEKNMKAYNK+ EGPK+++ ESDK
Sbjct: 61 KSVAAVGKAGGDKWKSLSEAEKAPYVAKAEKRKVEYEKNMKAYNKRQAEGPKDEDVESDK 120
Query: 470 SVSEVNDEDDADDGSDEEEDDD 535
SVSEVNDEDD ++GS +EEDD+
Sbjct: 121 SVSEVNDEDDDEEGSGDEEDDE 142
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis
thaliana]
Length = 142
Score = 228 bits (581), Expect = 6e-058
Identities = 113/142 (79%), Positives = 129/142 (90%), Gaps = 4/142 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKAS---KAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKG KSK +T+SSKL+V KKPAK + KAAAKDPNKPKRP+SAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEE 460
P NKSVA VGKA G KWKSLSD+EKAPYVAKA+ RKVEYEKN+KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 461 SDKSVSEVNDEDDADDGSDEEE 526
SDKSVSEVNDEDDA+DGS+E++
Sbjct: 120 SDKSVSEVNDEDDAEDGSEEDD 141
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium
hirsutum]
Length = 148
Score = 226 bits (574), Expect = 4e-057
Identities = 113/148 (76%), Positives = 127/148 (85%), Gaps = 6/148 (4%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPA----KASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKD 277
MKGGKSK+DTKSS+LAVNKK + K S AAKDPNKPKRP+SAFFVFME+FR+ YKK+
Sbjct: 1 MKGGKSKSDTKSSRLAVNKKSSAKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKE 60
Query: 278 HPNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEE 457
HP NKSVAAVGKAGG+KWKSLSD EKAPY+AKA+ RKVEYEKNMKAY K+ E PKE+E
Sbjct: 61 HPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAEKRKVEYEKNMKAYTKRQAEAPKEEES 120
Query: 458 ESDKSVSEVNDEDDADD--GSDEEEDDD 535
ES+KSVSEVNDE+D DD GS EEEDDD
Sbjct: 121 ESEKSVSEVNDEEDEDDEEGSGEEEDDD 148
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium
hirsutum]
Length = 146
Score = 216 bits (549), Expect = 3e-054
Identities = 106/146 (72%), Positives = 122/146 (83%), Gaps = 4/146 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNK----KPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKD 277
MKGGKSK+D KS+KL+VNK K K S AAKDPNKPKRP+SAFFVFME+FR+ YKK+
Sbjct: 1 MKGGKSKSDAKSAKLSVNKKSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKE 60
Query: 278 HPNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEE 457
HP NKSVAAVGKAGG KWKSLS+ EK PYV KA+ RKVEYEKNMKAYNK+ EGP+EDEE
Sbjct: 61 HPKNKSVAAVGKAGGDKWKSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQAEGPQEDEE 120
Query: 458 ESDKSVSEVNDEDDADDGSDEEEDDD 535
ES+KSVSEVNDE++ DD +EDD+
Sbjct: 121 ESEKSVSEVNDEEEDDDEGSGDEDDE 146
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus
communis]
Length = 145
Score = 215 bits (546), Expect = 7e-054
Identities = 105/145 (72%), Positives = 125/145 (86%), Gaps = 4/145 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASK---AAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKGGKSKAD K+SKL+VNKKP KA+K AAKDPNKPKRP+SAFFVFME+FR+ YKK+H
Sbjct: 1 MKGGKSKADAKNSKLSVNKKPVKATKKAGKAAKDPNKPKRPASAFFVFMEEFREQYKKEH 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEE 460
P NKSVAAVGKAGG +WKS+S++EKAP+VAKA+ RK+EYEK +KAYNK EGPKE EEE
Sbjct: 61 PKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAEKRKIEYEKKLKAYNKGQAEGPKE-EEE 119
Query: 461 SDKSVSEVNDEDDADDGSDEEEDDD 535
S+KS+SEVNDE++ D+ EEDDD
Sbjct: 120 SEKSMSEVNDEEEDDEEGSAEEDDD 144
>gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 194 bits (492), Expect = 1e-047
Identities = 97/146 (66%), Positives = 115/146 (78%), Gaps = 4/146 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASK---AAAKDPNKPKRPSSAFFVFMEDFRQTYKKDH 280
MKGGKSK K + + K A ASK AAKDPNKPKRP+SAFFVFME+FR+ YKK+H
Sbjct: 1 MKGGKSKGAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60
Query: 281 PNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPK-EDEE 457
PNNKSVAAVGKAGG KWKS+SD EKAPY+ KA+ RK EY K+M+AYNK++ EG +EE
Sbjct: 61 PNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEE 120
Query: 458 ESDKSVSEVNDEDDADDGSDEEEDDD 535
ESDKS SEVND+D+ DD S E+EDD+
Sbjct: 121 ESDKSKSEVNDDDEDDDESGEDEDDE 146
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 194 bits (491), Expect = 2e-047
Identities = 102/149 (68%), Positives = 115/149 (77%), Gaps = 6/149 (4%)
Frame = +2
Query: 92 RQKNRAMKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYK 271
+ ++ K +K TK A KK K AAKDPNKPKRP+SAFFVFME+FR+ YK
Sbjct: 7 KSDTKSAKLSVNKKPTKGGAAAAAKKSGK----AAKDPNKPKRPASAFFVFMEEFREQYK 62
Query: 272 KDHPNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKED 451
K+HP NKSVAAVGKAGG KWKSLS EKAPYVAKAD RKVEYEK MKAYNK+ EGPKE
Sbjct: 63 KEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGPKE- 121
Query: 452 EEESDKSVSEVNDED-DADDGSDEEEDDD 535
EEES+KSVSEVNDED D ++GS EE+DDD
Sbjct: 122 EEESEKSVSEVNDEDEDDEEGSAEEDDDD 150
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 191 bits (485), Expect = 8e-047
Identities = 98/142 (69%), Positives = 113/142 (79%), Gaps = 4/142 (2%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKA--AAKDPNKPKRPSSAFFVFMEDFRQTYKKDHP 283
MKG KSKA +KL V KK ++ KA AAKDPNKPKRP SAFFVFME+FR+TYK+ HP
Sbjct: 1 MKGAKSKAKA-DTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHP 59
Query: 284 NNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEES 463
NNKSVA VGKAGG KWK LSD EKAPY AKA+ RK EY+KNM AYNKKL G D+EES
Sbjct: 60 NNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAG-DADDEES 118
Query: 464 DKSVSEVNDEDDADDGSDEEED 529
DKS SEV+D+D+ DDGS++E+D
Sbjct: 119 DKSKSEVHDDDEDDDGSEQEDD 140
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis
thaliana]
Length = 147
Score = 191 bits (483), Expect = 1e-046
Identities = 91/107 (85%), Positives = 100/107 (93%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKDHPNN 289
MKG KSKA+T+S+KL+V KKPAK +K AAKDPNKPKRPSSAFFVFMEDFR TYK++HP N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 290 KSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKL 430
KSVAAVGKAGG+KWKSLSD+EKAPYVAKAD RKVEYEKNMKAYNKKL
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus
trichocarpa]
Length = 144
Score = 191 bits (483), Expect = 1e-046
Identities = 95/144 (65%), Positives = 115/144 (79%), Gaps = 7/144 (4%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPA----KASKAAAKDPNKPKRPSSAFFVFMEDFRQTYKKD 277
MKGG+SK+D++++ + +K A KASK AAKDPNKPKRP+SAFFVFMEDFR+ YK+
Sbjct: 1 MKGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKES 60
Query: 278 HPNNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEE 457
HPNNKSVAAVGKAGG KWKSLS+ EKAPY AKA+ RK EY K+M AYNK+L G +++
Sbjct: 61 HPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGG---NDD 117
Query: 458 ESDKSVSEVNDEDDADDGSDEEED 529
ESDKS SEVNDED+ D+ EEED
Sbjct: 118 ESDKSKSEVNDEDEEDESDGEEED 141
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 188 bits (477), Expect = 7e-046
Identities = 99/144 (68%), Positives = 113/144 (78%), Gaps = 6/144 (4%)
Frame = +2
Query: 110 MKGGKSKADTKSSKLAVNKKPAKASKA--AAKDPNKPKRPSSAFFVFMEDFRQTYKKDHP 283
MKGGKSKA SKL V KK + KA AAKDPNKPKRP SAFFVFME+FR+TYK+ HP
Sbjct: 1 MKGGKSKAGA-DSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHP 59
Query: 284 NNKSVAAVGKAGGQKWKSLSDTEKAPYVAKADNRKVEYEKNMKAYNKKLEEGPKEDEEES 463
NNKSVAAVGKAGG WK LS+ EKAPY AKA+ RK EY+KNM AYN+K + +E+ES
Sbjct: 60 NNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRK--QAGDAEEDES 117
Query: 464 DKSVSEVNDEDDA-DDGSDEEEDD 532
DKS SEV+D+DD DDGS+EEEDD
Sbjct: 118 DKSKSEVHDDDDEDDDGSEEEEDD 141
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,628,988,984
Number of Sequences: 15229318
Number of Extensions: 1572628988984
Number of Successful Extensions: 405575147
Number of sequences better than 0.0: 0
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