BLASTX 7.6.2
Query= UN13596 /QuerySize=1010
(1009 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297801882|ref|XP_002868825.1| hypothetical protein ARALYDRAFT... 173 4e-041
gi|297805392|ref|XP_002870580.1| hypothetical protein ARALYDRAFT... 172 9e-041
gi|15240377|ref|NP_198607.1| putative E3 ubiquitin-protein ligas... 163 5e-038
gi|15240373|ref|NP_198603.1| putative E3 ubiquitin-protein ligas... 157 3e-036
gi|297805394|ref|XP_002870581.1| hypothetical protein ARALYDRAFT... 143 6e-032
gi|297801884|ref|XP_002868826.1| hypothetical protein ARALYDRAFT... 140 4e-031
gi|297801876|ref|XP_002868822.1| hypothetical protein ARALYDRAFT... 138 1e-030
gi|297805390|ref|XP_002870579.1| hypothetical protein ARALYDRAFT... 137 3e-030
gi|297801888|ref|XP_002868828.1| hypothetical protein ARALYDRAFT... 135 1e-029
gi|15219709|ref|NP_176836.1| E3 ubiquitin-protein ligase SINA-li... 135 2e-029
gi|22327429|ref|NP_198605.2| E3 ubiquitin-protein ligase SINA-li... 133 6e-029
gi|7657876|emb|CAB89182.1| SIAH1 protein [Brassica napus var. na... 123 6e-026
gi|15219708|ref|NP_176835.1| E3 ubiquitin-protein ligase SINA-li... 122 1e-025
gi|15864565|emb|CAC80703.1| SIAH1 protein [Brassica napus] 121 2e-025
gi|9758493|dbj|BAB09039.1| unnamed protein product [Arabidopsis ... 119 9e-025
gi|15240805|ref|NP_198609.1| E3 ubiquitin-protein ligase SINA-li... 119 9e-025
gi|297801870|ref|XP_002868819.1| seven in absentia family protei... 119 9e-025
gi|224135291|ref|XP_002327611.1| predicted protein [Populus tric... 118 2e-024
gi|255583779|ref|XP_002532642.1| ubiquitin-protein ligase, putat... 118 2e-024
gi|158564027|sp|Q9FKD6.2|SINL8_ARATH RecName: Full=E3 ubiquitin-... 116 6e-024
>gi|297801882|ref|XP_002868825.1| hypothetical protein ARALYDRAFT_356210
[Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 173 bits (438), Expect = 4e-041
Identities = 110/264 (41%), Positives = 146/264 (55%), Gaps = 24/264 (9%)
Frame = +3
Query: 15 NNNSTSRKRQRSQ-TEG---TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKL 182
+NN+ +KRQRS EG + LL LD DCPICF LTIPIFQCDNGH+ACS+CC KL
Sbjct: 139 SNNTLLKKRQRSSILEGKTRSGMLLGLDVLDCPICFEALTIPIFQCDNGHLACSSCCHKL 198
Query: 183 SQKCATCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTC 353
S KC TC+ P +R RAME VLE + V C NA GC+ VS S H C F+Q +C
Sbjct: 199 SNKCPTCASPVGHNRCRAMESVLESVFVTCRNAKFGCAKNVSYGKVSIHEKECTFSQCSC 258
Query: 354 PFSSCDFTCSFKDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILK 533
P C++T S+ ++Y H + H + +S+ F CG V + + + IL
Sbjct: 259 PALDCNYTGSYNNIYSHFVDNHRNKS----------TSISFVCGGSVDVQMNISTGNILV 308
Query: 534 EQTTTKGEGEIVVVEGFDRPDGRMFYACCIGPGT---DKFSYQLKLSLASGDDLLYDS-N 701
Q + K G + ++ F +P G CI P T K +Y L S+ G L Y S
Sbjct: 309 LQESKK--GLLFALQCFYKPHGLYVTVRCIAPSTPEVGKLAYCLYYSM-DGHTLTYKSPE 365
Query: 702 LQRVREVSNEPPLANFMLVPSCML 773
+++V EVS+E P NFM VP +L
Sbjct: 366 VKKVLEVSSETPQDNFMFVPHSLL 389
>gi|297805392|ref|XP_002870580.1| hypothetical protein ARALYDRAFT_915957
[Arabidopsis lyrata subsp. lyrata]
Length = 286
Score = 172 bits (435), Expect = 9e-041
Identities = 100/263 (38%), Positives = 146/263 (55%), Gaps = 29/263 (11%)
Frame = +3
Query: 30 SRKRQRSQTEG--------TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLS 185
S+KRQ S ++G + L++L+ DCPIC+ TIPIFQCDNGH+ACS+CC KL+
Sbjct: 21 SQKRQLSSSDGAKRDAKKRSIMLMELEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLN 80
Query: 186 QKCATCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCP 356
KC C+ P +R RAME VLE + V CPNA GC+ S S H C F+Q +CP
Sbjct: 81 NKCPACASPVGHNRCRAMESVLESILVPCPNAKLGCTKKFSYGKESTHEKECIFSQCSCP 140
Query: 357 FSSCDFTCSFKDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILKE 536
C++TCS+KDLY+H H + HL K F CG+ I + +++++++
Sbjct: 141 ALDCNYTCSYKDLYRHYHTTH-LEVYHLNK---------FCCGSFFSIRINISEKMLIRL 190
Query: 537 QTTTKGEGEIVVVEGFDRPDGRMFYACCIGPGTDK---FSYQLKLSLASGDDLLYDS-NL 704
+ T + + V+ F P G CI P + FSY L ++ G + Y S +
Sbjct: 191 EYT---KALLFAVQCFQEPYGVYVTVSCIAPSAPEVGNFSYDLSYTV-DGQTMTYKSPKM 246
Query: 705 QRVREVSNEPPLANFMLVPSCML 773
+ + EVS + P NFML+P+ +L
Sbjct: 247 KMILEVSFQTPQENFMLIPNNLL 269
>gi|15240377|ref|NP_198607.1| putative E3 ubiquitin-protein ligase SINA-like 9
[Arabidopsis thaliana]
Length = 276
Score = 163 bits (411), Expect = 5e-038
Identities = 103/270 (38%), Positives = 136/270 (50%), Gaps = 35/270 (12%)
Frame = +3
Query: 3 ISEDNNNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKL 182
IS+ + KRQRS LLDLD DCPIC LT PIFQCDNGH+AC +CC KL
Sbjct: 11 ISQGDGGERVAKRQRS----AIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKL 66
Query: 183 SQKCATCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTC 353
S KC C+LP SR+RAME VLE + + CPN GC+ SAH C F+Q +C
Sbjct: 67 SNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSC 126
Query: 354 PFSSCDFTCSFKDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILK 533
P S CD+T S+KDLY H HS + ++ F+C + + +I++K
Sbjct: 127 PSSVCDYTGSYKDLYAHYKLTHS--------TNIFWNIKRFRCANFFTTSMLISDKILIK 178
Query: 534 EQTTTK---------GEGEIVVVEGFDRPDGRMFYACCIGPGTDKFSYQLKLSLASGDDL 686
K + V F P P +FSYQL ++ G +
Sbjct: 179 RVHEKKLLLAVQCFREPCGVYVTVSFIAPS---------APEVGEFSYQLSYNV-DGHTV 228
Query: 687 LYDS-NLQRVREVSNEPPLANFMLVPSCML 773
Y+S ++RV +VS E P NFML+P +L
Sbjct: 229 TYESPEVKRVCKVSIETPQENFMLIPHSLL 258
>gi|15240373|ref|NP_198603.1| putative E3 ubiquitin-protein ligase SINA-like 6
[Arabidopsis thaliana]
Length = 281
Score = 157 bits (396), Expect = 3e-036
Identities = 94/257 (36%), Positives = 133/257 (51%), Gaps = 20/257 (7%)
Frame = +3
Query: 24 STSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATC 203
S+ R+R +A L DLD DCPIC+ L IP+FQC NGH+ACS+CC KL KC C
Sbjct: 21 SSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPAC 80
Query: 204 SLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDF 374
+LP R RAMERVLE + V C A GC+ + S H C F+ +CP C++
Sbjct: 81 ALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNY 140
Query: 375 TCSFKDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILKEQTTTKG 554
T S+KDLY+H HS + + GVS+ + M + I K+++
Sbjct: 141 TGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLF-------- 192
Query: 555 EGEIVVVEGFDRPDGRMFYACCIGPG---TDKFSYQLKLSLASGDDLLYDS-NLQRVREV 722
VV+ F+ P G CI P +FSY L + G + Y S +++V +V
Sbjct: 193 -----VVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLKV 247
Query: 723 SNEPPLANFMLVPSCML 773
S++ P +FML+P +L
Sbjct: 248 SSQRPKDSFMLIPHSLL 264
>gi|297805394|ref|XP_002870581.1| hypothetical protein ARALYDRAFT_915958
[Arabidopsis lyrata subsp. lyrata]
Length = 269
Score = 143 bits (359), Expect = 6e-032
Identities = 68/138 (49%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Frame = +3
Query: 15 NNNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKC 194
++N +K+QR++ + +LD D DCP+CF LTIPIFQCDNGH+ACS+CC KLS KC
Sbjct: 11 SSNINLQKKQRTEDKTRPAMLDFDVLDCPVCFEPLTIPIFQCDNGHLACSSCCPKLSNKC 70
Query: 195 ATCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSS 365
TC+L R RAME VLE + + CPNA GC+ +S S H C F+Q CP +
Sbjct: 71 PTCTLHVGNKRCRAMESVLESIFIPCPNANFGCTKSISYGKESTHEKECIFSQCYCPALN 130
Query: 366 CDFTCSFKDLYKHSLAKH 419
C++T S+KDLY H H
Sbjct: 131 CNYTSSYKDLYTHYRTTH 148
>gi|297801884|ref|XP_002868826.1| hypothetical protein ARALYDRAFT_916594
[Arabidopsis lyrata subsp. lyrata]
Length = 272
Score = 140 bits (352), Expect = 4e-031
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Frame = +3
Query: 36 KRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT 215
KRQ+++ E + +LDLDF DCPIC T+PIFQCDNGH+AC++CC KLS KC TC+LP
Sbjct: 18 KRQQTKDETRSAMLDLDFLDCPICIEPFTVPIFQCDNGHLACASCCPKLSNKCPTCTLPV 77
Query: 216 -LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQR-TCPFSSCDFTCS 383
R+RAME VLE + + CPNA GC+ VS S H C F+ +CP C++T S
Sbjct: 78 GHIRSRAMESVLESIFIPCPNAKLGCTTNVSYGKQSIHEKECSFSLLCSCPLQDCNYTSS 137
Query: 384 FKDLYKHSLAKH 419
+ ++Y+H ++ H
Sbjct: 138 YSNMYRHFISDH 149
>gi|297801876|ref|XP_002868822.1| hypothetical protein ARALYDRAFT_494184
[Arabidopsis lyrata subsp. lyrata]
Length = 270
Score = 138 bits (347), Expect = 1e-030
Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 11/161 (6%)
Frame = +3
Query: 36 KRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT 215
KR RS ATLLDLD DCP+C L PIFQCDNGH+ACS+CC KL KC +C+ P
Sbjct: 20 KRHRS-----ATLLDLDILDCPVCCEALATPIFQCDNGHLACSSCCPKLRNKCPSCAFPV 74
Query: 216 -LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSF 386
+R RAME +LE V CPN GC+ SAH C F+Q +CP CD+T S+
Sbjct: 75 GHNRCRAMESILESTLVPCPNEMFGCTKTCFYGKESAHEKECIFSQCSCPSRECDYTGSY 134
Query: 387 KDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLV--RIH 503
KDLY H HS + + K G+ ++++MF ++ R+H
Sbjct: 135 KDLYAHYKLTHSKFSWSI-KCGIPYTAVMFISNKILIKRVH 174
>gi|297805390|ref|XP_002870579.1| hypothetical protein ARALYDRAFT_915956
[Arabidopsis lyrata subsp. lyrata]
Length = 246
Score = 137 bits (344), Expect = 3e-030
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 11/157 (7%)
Frame = +3
Query: 72 LLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAMERVL 248
L+DL+ DCPIC+ TIPIFQCDNGH+ACS+CC LS KC TC+LP +R R ME VL
Sbjct: 2 LMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPTLSNKCPTCALPIGHNRCRGMESVL 61
Query: 249 ELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLAKHS 422
E + + CPNA GC+ VS S H C F+Q +CP C++T S+KDLY H H
Sbjct: 62 ESILIPCPNAKLGCTKKVSYGKESTHEKECIFSQCSCPVEDCNYTSSYKDLYTHYRITH- 120
Query: 423 IAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILK 533
+ L K S +V+++++++K+I+++
Sbjct: 121 MKVYQLHKFICDIPS-------IVKMNISSDKKILIR 150
>gi|297801888|ref|XP_002868828.1| hypothetical protein ARALYDRAFT_916596
[Arabidopsis lyrata subsp. lyrata]
Length = 340
Score = 135 bits (339), Expect = 1e-029
Identities = 64/132 (48%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Frame = +3
Query: 18 NNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCA 197
+N ++RQR++ E + +LDLDF DCPIC TIPIFQCDNGH+AC++CC KLS KC
Sbjct: 12 SNIHLQRRQRTEDETRSAMLDLDFLDCPICVEPFTIPIFQCDNGHLACASCCPKLSNKCP 71
Query: 198 TCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSC 368
C+LP +R RAME +LE + V C NA GC+ VS S H C F+ CP +C
Sbjct: 72 ACTLPVGHNRCRAMESILESISVPCQNAKFGCTKKVSYGKQSTHEKECIFSPCFCPIQNC 131
Query: 369 DFTCSFKDLYKH 404
+++ +KD+Y H
Sbjct: 132 NYSGLYKDVYYH 143
>gi|15219709|ref|NP_176836.1| E3 ubiquitin-protein ligase SINA-like 3
[Arabidopsis thaliana]
Length = 303
Score = 135 bits (338), Expect = 2e-029
Identities = 87/250 (34%), Positives = 126/250 (50%), Gaps = 28/250 (11%)
Frame = +3
Query: 48 SQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSR 224
S+ +ATLL+LD DCPIC++ L PI+QCDNGH+ACS+CC+K+ KC CSL R
Sbjct: 33 SEVARSATLLELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFR 92
Query: 225 NRAMERVLELLRVRCPNA--GCSMVV--SCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKD 392
+R +E+++E + V CPNA GC+ + SAH C FT CP C +T + D
Sbjct: 93 SRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKYTGVYTD 152
Query: 393 LYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTL--VRIHLTANKR--IILKEQTTTKGEG 560
LY+H A+H FKCG +H+T K ++L+E +G
Sbjct: 153 LYRHYHAEHKT------------DHSWFKCGEYNNAWLHVTGEKLSFLVLQEYE----DG 196
Query: 561 EIVVVEGFDRPDGRMFYACCI---GPGTDKFSYQLKLSLASGDDLLYDSNLQRVREVSNE 731
+VVV+ G CI PG +FS L S + ++++VS E
Sbjct: 197 PLVVVQCSMESHGICVTVNCIAPCAPGVGEFSCHLIYRNGSEKITFESKKMNKIQKVSPE 256
Query: 732 PPLANFMLVP 761
+AN+ +P
Sbjct: 257 NHVANYKPIP 266
>gi|22327429|ref|NP_198605.2| E3 ubiquitin-protein ligase SINA-like 7
[Arabidopsis thaliana]
Length = 286
Score = 133 bits (333), Expect = 6e-029
Identities = 64/142 (45%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Frame = +3
Query: 3 ISEDNNNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKL 182
+S+ S+S +R + + L+DL+ DCPIC+ TIPIFQCDNGH+ACS+CC KL
Sbjct: 20 LSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKL 79
Query: 183 SQKCATCSLPT-LSRNRAMERVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTC 353
+ KC C+ P +R RAME VLE + + CPNA GC VS H C F+ C
Sbjct: 80 NNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCAC 139
Query: 354 PFSSCDFTCSFKDLYKHSLAKH 419
P C++T S+KDLY H H
Sbjct: 140 PALDCNYTSSYKDLYTHYRITH 161
>gi|7657876|emb|CAB89182.1| SIAH1 protein [Brassica napus var. napus]
Length = 351
Score = 123 bits (307), Expect = 6e-026
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAME 239
+ TLLDLD DCP+CF LT +FQCDNGH+ACS+CC +L KC C+LP +R R ME
Sbjct: 47 SGTLLDLDLLDCPVCFQALTQHVFQCDNGHIACSSCCRELRNKCPACALPIGNNRCRIME 106
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
RV+E + V CPNA GC+ S AH C F CP C++ +KDLY H A
Sbjct: 107 RVVESVTVPCPNAKHGCTEKFSYGKELAHEKECRFALCYCPAPDCNYAGVYKDLYTHYDA 166
Query: 414 KH 419
H
Sbjct: 167 NH 168
>gi|15219708|ref|NP_176835.1| E3 ubiquitin-protein ligase SINA-like 2
[Arabidopsis thaliana]
Length = 313
Score = 122 bits (305), Expect = 1e-025
Identities = 58/122 (47%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPTLS-RNRAME 239
+ TL +LD DCPIC + LT PIFQCDNGH+ACS+CC KL KC +C+LP + R+R ME
Sbjct: 33 SGTLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIME 92
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
RV+E + V CPN GC+ S H C F CP +C+++ +KDLY H
Sbjct: 93 RVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYV 152
Query: 414 KH 419
H
Sbjct: 153 NH 154
>gi|15864565|emb|CAC80703.1| SIAH1 protein [Brassica napus]
Length = 351
Score = 121 bits (302), Expect = 2e-025
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAME 239
+ LLDLD DCP+CF LT +FQCDNGH+ACS+CC +L KC C+LP +R R ME
Sbjct: 47 SGALLDLDLLDCPVCFQALTQHVFQCDNGHIACSSCCRELRNKCPACALPIGNNRCRIME 106
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
RV+E + V CPNA GC+ S AH C F CP C++ +KDLY H A
Sbjct: 107 RVVESVTVPCPNAKHGCTEKFSYGKELAHEKECRFALCYCPAPDCNYAGVYKDLYTHYDA 166
Query: 414 KH 419
H
Sbjct: 167 NH 168
>gi|9758493|dbj|BAB09039.1| unnamed protein product [Arabidopsis thaliana]
Length = 291
Score = 119 bits (297), Expect = 9e-025
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAME 239
+ TLLD D DCPIC L IPIFQCDNGH+AC+ CC K+ +C +C+LP R RAME
Sbjct: 44 SVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAME 103
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
+V+E RV C NA GC S +H C FT +CP C +T +KDL H A
Sbjct: 104 KVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRA 163
Query: 414 KH 419
+H
Sbjct: 164 EH 165
>gi|15240805|ref|NP_198609.1| E3 ubiquitin-protein ligase SINA-like 10
[Arabidopsis thaliana]
Length = 349
Score = 119 bits (297), Expect = 9e-025
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAME 239
+ TLLD D DCPIC L IPIFQCDNGH+AC+ CC K+ +C +C+LP R RAME
Sbjct: 102 SVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAME 161
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
+V+E RV C NA GC S +H C FT +CP C +T +KDL H A
Sbjct: 162 KVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRA 221
Query: 414 KH 419
+H
Sbjct: 222 EH 223
>gi|297801870|ref|XP_002868819.1| seven in absentia family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 350
Score = 119 bits (297), Expect = 9e-025
Identities = 58/122 (47%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 63 TATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAME 239
+ TLLD D DCPIC L IPIFQCDNGH+AC+ CC K+ +C +C+LP R RAME
Sbjct: 103 SVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAME 162
Query: 240 RVLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLA 413
+V+E RV CPNA GC + +H C FT CP C+++ +KDL H A
Sbjct: 163 KVIETSRVSCPNAKYGCKENTAYGNRFSHEKVCVFTPCFCPIVDCNYSGYYKDLNNHVRA 222
Query: 414 KH 419
+H
Sbjct: 223 EH 224
>gi|224135291|ref|XP_002327611.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 118 bits (294), Expect = 2e-024
Identities = 58/121 (47%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Frame = +3
Query: 66 ATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAMER 242
ATL D + DCPIC LTIP+FQCDNGH ACS+CC KL KC +C++P +R RA+E+
Sbjct: 116 ATLSDPEVLDCPICCEPLTIPVFQCDNGHTACSSCCIKLQHKCPSCTMPIGYNRCRAIEK 175
Query: 243 VLELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLAK 416
VLE L+V C N+ GC + S H C TCP +C++ S K LY+H K
Sbjct: 176 VLESLKVSCSNSSYGCKESICYSKKYEHDKSCTHAPCTCPLPACNYQGSSKRLYQHCRIK 235
Query: 417 H 419
H
Sbjct: 236 H 236
>gi|255583779|ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus
communis]
Length = 374
Score = 118 bits (294), Expect = 2e-024
Identities = 58/124 (46%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Frame = +3
Query: 69 TLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKLSQKCATCSLPT-LSRNRAMERV 245
TL D + DCPIC+ L+IP+FQC+NGH ACS+CC KL+ KC +CSLP +R RA+E+V
Sbjct: 113 TLTDPEVLDCPICYECLSIPVFQCENGHTACSSCCRKLAHKCPSCSLPIGYNRCRAIEKV 172
Query: 246 LELLRVRCPNA--GCSMVVSCSGTSAHVDHCPFTQRTCPFSSCDFTCSFKDLYKHSLAKH 419
LE +++ C N GC +VS S H C +CP S C F S + LY+H KH
Sbjct: 173 LESVKLPCHNLKYGCKEMVSYSKKLDHDKICNNAPCSCPLSGCSFVGSSRQLYQHFSIKH 232
Query: 420 SIAA 431
+A
Sbjct: 233 KGSA 236
>gi|158564027|sp|Q9FKD6.2|SINL8_ARATH RecName: Full=E3 ubiquitin-protein ligase
SINA-like 8; AltName: Full=Seven in absentia-like protein 8
Length = 263
Score = 116 bits (290), Expect = 6e-024
Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Frame = +3
Query: 3 ISEDNNNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHMACSTCCEKL 182
IS+ + KRQRS ATLLDLD DCPIC LT PIFQC+NGH+ACS+CC KL
Sbjct: 9 ISQGHGGERVAKRQRS-----ATLLDLDILDCPICCEGLTCPIFQCENGHLACSSCCPKL 63
Query: 183 SQKCATCSLPTLSRNRAMERVLELLRVRCPN--AGCSMVVSCSGTSAHVDHCPFTQRTCP 356
KC C ME +LE + V CPN GC+ S H + C F+ +CP
Sbjct: 64 RNKCPAC---------PMENILESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCP 114
Query: 357 FSSCDFTCSFKDLYKHSLAKH 419
C+++ ++DLY H H
Sbjct: 115 SLDCEYSGRYEDLYDHYKLTH 135
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,628,988,984
Number of Sequences: 15229318
Number of Extensions: 1572628988984
Number of Successful Extensions: 405575147
Number of sequences better than 0.0: 0
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