BLASTX 7.6.2
Query= UN13631 /QuerySize=1099
(1098 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 303 2e-082
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 246 3e-065
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 101 1e-021
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 78 1e-014
TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY... 64 1e-010
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 54 2e-007
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 54 2e-007
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 54 2e-007
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 303 bits (774), Expect = 2e-082
Identities = 193/293 (65%), Positives = 210/293 (71%), Gaps = 45/293 (15%)
Frame = -1
Query: 1041 MSAEEETVPTNVEE-----TVTA----PAASEKKAKKTKEAKAPKKKPAAKAPRKRSSSS 889
MS EEE VPT V+ TV + PAA K+KKT AKA KK A AP K+ ++S
Sbjct: 1 MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60
Query: 888 SHPTYEEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLV 709
SHPTYEEMIKDAI TLKERTGSSQYAIQK IEEK K+LPPTFRKLLLVNLKRLVAS KLV
Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120
Query: 708 KVKGSFKLPSSATKSTAVAAPAPKPSAPVKKKAT-VAKPKA----------AKPAAKGSK 562
KVK SFK+PS+ + +T PKP+APVKKKAT VAKPK AK AAKG+K
Sbjct: 121 KVKASFKIPSARSAAT------PKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTK 174
Query: 561 K------TKAAVAVKPKAKVVAAKPKPKTKTVAAVSKTKAIAAAKPKAKERPAKAARTST 400
K KA V KPKAKV AA KPK+K+VAAVSKTKA+ AAKPKAKERPAKA+RTST
Sbjct: 175 KPAAKVVAKAKVTAKPKAKVTAA--KPKSKSVAAVSKTKAV-AAKPKAKERPAKASRTST 231
Query: 399 RTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAVKSPAKRVSTRKVKK* 241
RTSPGKK AAP K AVTK KAPAKSVK VKSPAKR STRK KK*
Sbjct: 232 RTSPGKKVAAPAKK---VAVTK----KAPAKSVK---VKSPAKRASTRKAKK* 274
Score = 243 bits (618), Expect = 2e-064
Identities = 153/263 (58%), Positives = 171/263 (65%), Gaps = 16/263 (6%)
Frame = -1
Query: 1014 TNVEETVTAPAASEKKAKKTKEAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKE 835
T V+ PAA K+KKT AKA KK A AP K+ ++SSHPTYEEMIKDAI TLKE
Sbjct: 19 TTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKE 78
Query: 834 RTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSSATKSTAV 655
RTGSSQYAIQK IEEK K+LPPTFRKLLLVNLKRLVAS KLVKVK SFK+PS+ + +T
Sbjct: 79 RTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAAT-- 136
Query: 654 AAPAPKPSAPVKKKAT-VAKPKAAKPAAKGSKKTKAAV--AVKPKAKVVA---AKPKPKT 493
PKP+APVKKKAT VAKPK AA K KAA KP AKVVA KPK
Sbjct: 137 ----PKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKA 192
Query: 492 KTVAAVSKTKAIAA-AKPKAKERPAKAARTSTRTSPGKKKAAPPAKKAAAAVTKKAKAKA 316
K AA K+K++AA +K KA KA + S + +P K AA A KA
Sbjct: 193 KVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKA 252
Query: 315 PAKSVKAKAVKSPAKRVSTRKVK 247
PAKSVK VKSPAKR STRK K
Sbjct: 253 PAKSVK---VKSPAKRASTRKAK 272
Score = 63 bits (151), Expect = 3e-010
Identities = 53/131 (40%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Frame = -1
Query: 624 VKKKATVAKPKAAK-------PAAKGSKKTKAAVAVKPKAKVVAAKPKPKTKTVAAVSKT 466
V K VA K K P+A+ + K A VK KA VVA KPK K AAV+
Sbjct: 108 VNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVA---KPKGKVAAAVAPA 164
Query: 465 KAIAAAKPKAKERPAKAARTSTRTSP-GKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKA 289
KA AAAK K A+ P K AA P K+ AAV +K KA A KAK
Sbjct: 165 KAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAV---SKTKAVAAKPKAKE 221
Query: 288 VKSPAKRVSTR 256
+ A R STR
Sbjct: 222 RPAKASRTSTR 232
Score = 59 bits (142), Expect = 4e-009
Identities = 69/227 (30%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Frame = -1
Query: 1017 PTNVEETVTAPAASE--KKAKKTKEAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITT 844
PT + T + P E K A T + + + A + + S PT+ +++ +
Sbjct: 53 PTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLL---LVN 109
Query: 843 LKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLV--KVKGSFKLPSSAT 670
LK S +KL++ K P+ R V V K KG +
Sbjct: 110 LKRLVAS-----EKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPA 164
Query: 669 KSTAVAAPAPKPSAPVKKKATV-AKPKAAKPAAKGSKKTKAAVAVKPKAKVVAAKPKPK- 496
K+ A A KP+A V KA V AKPKA AAK K+ AAV+ K K VAAKPK K
Sbjct: 165 KAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVS---KTKAVAAKPKAKE 221
Query: 495 -----TKTVAAVSKTKAIAAAKPK---AKERPAKAARTSTRTSPGKK 379
++T S K +AA K K+ PAK+ + SP K+
Sbjct: 222 RPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKSVKVK---SPAKR 265
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 246 bits (626), Expect = 3e-065
Identities = 158/254 (62%), Positives = 177/254 (69%), Gaps = 16/254 (6%)
Frame = -1
Query: 987 PAASEKKAKKTKEAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKERTGSSQYAI 808
PAA +K K KE K +KK A AP+KR + SSHPTYEEMIKDAI TLKERTGSSQYAI
Sbjct: 31 PAAKGRKTKNVKEVK--EKKTVAAAPKKR-TVSSHPTYEEMIKDAIVTLKERTGSSQYAI 87
Query: 807 QKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSSATKSTAVAAPAPKPSA 628
QK IEEK+K LPPTFRKLLL+NLKRLVASGKLVKVK SFKLPS++ K+++ A A K SA
Sbjct: 88 QKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSPKAAAEK-SA 146
Query: 627 PVKKK-ATVAKPKAAKPAAKGSKKTKAAVAVKPKA----KVVA-AKPKPKTKTVAAVSKT 466
P KKK ATVA KA + A S K K +AVKPK KV A AK KP + AA +K
Sbjct: 147 PAKKKPATVAVTKAKRKVAAAS-KAKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKR 205
Query: 465 KAIAAAKPKAKERPAKAARTSTRTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAV 286
KA+ AKPKAK RPAKAA+T+ TSP KK A K A A KK K K VK K V
Sbjct: 206 KAV-DAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKKTPVK---KVVKPKTV 261
Query: 285 KSPAKRVSTRKVKK 244
KSPAKR S+R VKK
Sbjct: 262 KSPAKRASSR-VKK 274
Score = 49 bits (116), Expect = 4e-006
Identities = 42/118 (35%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Frame = -1
Query: 669 KSTAVAAPAPKPSAPVKKKATVAKPKAAKPAAKGSKKTKAAVAVKPKAKVVAAKPKPKTK 490
K AA K + VK K AK AK AK + AA K K V AKPK K +
Sbjct: 161 KRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAAT---KRKAVDAKPKAKAR 217
Query: 489 TVAAVSKTKAIAAAKPKAKERPAKAARTST-RTSPGKKKAAP-----PAKKAAAAVTK 334
A K + AK KA K A +T + +P KK P PAK+A++ V K
Sbjct: 218 PAKAAKTAKVTSPAK-KAVAATKKVATVATKKKTPVKKVVKPKTVKSPAKRASSRVKK 274
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 101 bits (249), Expect = 1e-021
Identities = 70/168 (41%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Frame = -1
Query: 951 EAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKERTGSSQYAIQKLIEEKQKT-L 775
E K KK PAAK PRK +++HP Y +MIK+A+ LKE+ GSS YAI K IEEK K+ L
Sbjct: 3 EDKILKKTPAAKKPRK-PKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLL 61
Query: 774 PPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSSATKSTAVAAPAPKPSAPVKKKATVAKP 595
P +FRK L + LK VA GKLVK++ S+KL S TK + K + K+
Sbjct: 62 PESFRKTLSLQLKNSVAKGKLVKIRASYKL-SDTTK--MITRQQDKKNKKNMKQEDKEIT 118
Query: 594 KAAKPAAKGSKKTKAAVAVKPKAKVVAAKPKPKTKTVAAVSKTKAIAA 451
K + ++ KKT + + K KV A+ K ++V K KA+ A
Sbjct: 119 KRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSIK--SSVGKKKAMKA 164
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 78 bits (190), Expect = 1e-014
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Frame = -1
Query: 867 MIKDAITTLKERTGSSQYAIQKLIEEKQKT-LPPTFRKLLLVNLKRLVASGKLVKVKGSF 691
MIK+A+ LKE+ GSS YAI K IEEK K+ LP +FRK L + LK VA GKLVK++ S+
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 690 KLPSSATKSTAVAAPAPKPSAPVKKKATVAKPKAAKPAAKGSKKTKAAVAVKPKAKVVAA 511
KL S TK + K + K+ K + ++ KKT + + K KV A
Sbjct: 61 KL-SDTTK--MITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKA 117
Query: 510 KPKPKTKTVAAVSKTKAIAA 451
+ K ++V K KA+ A
Sbjct: 118 RQPKSIK--SSVGKKKAMKA 135
>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
binding | chr1:5138665-5139353 REVERSE
Length = 205
Score = 64 bits (155), Expect = 1e-010
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Frame = -1
Query: 894 SSSHPTYEEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGK 715
S S P Y +MI +AI +L ++ G ++ I K IE Q+TLPP+ LL +L ++ +G+
Sbjct: 20 SFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQ 79
Query: 714 LVKVKGSFKLPSSATKSTAVAAPAPKPSAPVKKKATVAKPKAA------KPAAKGSKKTK 553
L+ VK ++ P PK + A A AA P ++G
Sbjct: 80 LIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSRGRPPKP 139
Query: 552 AAVAVKPKAKVVAAKPKPKTKTVAAV-SKTKAIAAAKPKAKERPAKAAR 409
+ P+ KV+ +P+ + + ++ +AA +P A+ + R
Sbjct: 140 KDPSEPPQEKVITGSGRPRGRPPKRPRTDSETVAAPEPAAQATGERRGR 188
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 54 bits (128), Expect = 2e-007
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -1
Query: 873 EEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 694
+ +I +AI TLKE G ++ I IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 693 FKLPSSATKST 661
+++P+S S+
Sbjct: 181 YRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 54 bits (128), Expect = 2e-007
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -1
Query: 873 EEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 694
+ +I +AI TLKE G ++ I IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 693 FKLPSSATKST 661
+++P+S S+
Sbjct: 181 YRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 54 bits (128), Expect = 2e-007
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -1
Query: 873 EEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGS 694
+ +I +AI TLKE G ++ I IE+ Q PP F++LL LK L + GKLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 693 FKLPSSATKST 661
+++P+S S+
Sbjct: 181 YRIPNSTPLSS 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,210,802,533
Number of Sequences: 33410
Number of Extensions: 7210802533
Number of Successful Extensions: 248599830
Number of sequences better than 0.0: 0
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