BLASTX 7.6.2

Query= UN13656 /QuerySize=1117
        (1116 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G75510.1 | Symbols:  | transcription initiatio...    406   1e-113
TAIR9_protein||AT3G52270.1 | Symbols:  | ATP binding / RNA polym...    205   7e-053

>TAIR9_protein||AT1G75510.1 | Symbols:  | transcription initiation factor IIF
        beta subunit (TFIIF-beta) family protein | chr1:28347254-28348629
        REVERSE

          Length = 262

 Score =  406 bits (1043), Expect = 1e-113
 Identities = 207/259 (79%), Positives = 224/259 (86%), Gaps = 4/259 (1%)
 Frame = +2

Query: 164 NIHELDLEKSDRPVWLMKSPVVVAKAWGK-QAPSSSSFSSSGF-NSLGKVVESFDPLQ-- 331
           +IH LD+EKSDR +WLMK PVVV KAW K  A SSSSF+SS     + K+V   DPL+  
Sbjct:   3 DIHNLDIEKSDRSIWLMKCPVVVDKAWHKIAASSSSSFASSDSPPDMAKIVREVDPLRDD 62

Query: 332 SQTEFFMEMVGAEYGNMPKSYALNMFKDFVPMGIFSESNLGDPASEGKVEHKFDMKPHGE 511
           S  EF M MVGAEYGNMPK YALNMF DFVPMG FS+ N G  A+EGKV+HKFDMKP+GE
Sbjct:  63 SPPEFKMYMVGAEYGNMPKCYALNMFTDFVPMGGFSDVNQGCAAAEGKVDHKFDMKPYGE 122

Query: 512 DIEEYAKLCRERTSKSMVKSRQIQVIDNDRGVHMRPMPGMLGLVSSNSKEKKKPAPVKQT 691
            IEEYA+LCRERTSK+MVK+RQIQVIDNDRGVHMRPMPGMLGLVSSNSKEK+KP PVKQT
Sbjct: 123 TIEEYARLCRERTSKAMVKNRQIQVIDNDRGVHMRPMPGMLGLVSSNSKEKRKPPPVKQT 182

Query: 692 EVKRTRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSNQG 871
           EVKRTRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSNQG
Sbjct: 183 EVKRTRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSNQG 242

Query: 872 TYELKPEYKKAGEDDDTGE 928
           TYELKPEYKK+ EDD  G+
Sbjct: 243 TYELKPEYKKSAEDDTGGQ 261

>TAIR9_protein||AT3G52270.1 | Symbols:  | ATP binding / RNA polymerase II
        transcription factor | chr3:19387180-19388902 REVERSE

          Length = 288

 Score =  205 bits (519), Expect = 7e-053
 Identities = 97/154 (62%), Positives = 125/154 (81%), Gaps = 3/154 (1%)
 Frame = +2

Query: 452 GDPASEGKVEHKFDMKPHGEDIEEYAKLCRERTSKSMVKSRQIQVIDNDRGVHMRPMPGM 631
           G  + EGK+++KFDM+PH E+IE Y +LCRERT+K M K+RQIQVIDN RG+HMRPMPGM
Sbjct: 137 GKMSVEGKIKNKFDMRPHNENIESYGRLCRERTNKYMGKNRQIQVIDNARGMHMRPMPGM 196

Query: 632 LGLVSSNSKEKKKPAPVKQTEVKRTRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQ 811
             ++ + + EKKK    + +E+KRTRRDR E+E +MF LFE Q NWTL+ L+QETDQP Q
Sbjct: 197 --IIPTAAPEKKK-LTNRTSEMKRTRRDRREMEEVMFNLFERQSNWTLRLLIQETDQPEQ 253

Query: 812 FLKEILNELCVYNKRGSNQGTYELKPEYKKAGED 913
           FLK++L +LC+YN +GSNQGTYELKPEYKKA ++
Sbjct: 254 FLKDLLKDLCIYNNKGSNQGTYELKPEYKKATQE 287


 Score =  64 bits (154), Expect = 2e-010
 Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
 Frame = +2

Query: 137 ELTMEDDKNNIHELDLEKSDRPVWLMKSPVVVAKAWGKQA-PSSSSFSSSGFNSLGKVVE 313
           ++ M+  KN    L+   ++R + LMK+P +VA +    + P         +    KV+ 
Sbjct:  10 KVEMKVRKNENEALETGLAERSMLLMKAPSLVASSLQSHSFPDDPYRPDDPYRPDAKVIL 69

Query: 314 SFDPLQSQ---TEFFMEMVGAEYGNMPKSYALNMFKDFVPMGIFSESN 448
             DPL  +   T+F ME+  A+ GNMP+ Y L+M KDF+PM +F ES+
Sbjct:  70 GVDPLAHEDEGTQFVMELARADSGNMPRRYTLDMSKDFIPMNVFCESS 117

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,210,802,533
Number of Sequences: 33410
Number of Extensions: 7210802533
Number of Successful Extensions: 248599830
Number of sequences better than 0.0: 0