BLASTX 7.6.2
Query= UN13659 /QuerySize=1079
(1078 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17360.1 | Symbols: | 40S ribosomal protein S... 510 1e-144
TAIR9_protein||AT5G07090.1 | Symbols: | 40S ribosomal protein S... 509 1e-144
TAIR9_protein||AT5G58420.1 | Symbols: | 40S ribosomal protein S... 507 7e-144
TAIR9_protein||AT5G07090.2 | Symbols: | 40S ribosomal protein S... 474 6e-134
>TAIR9_protein||AT2G17360.1 | Symbols: | 40S ribosomal protein S4 (RPS4A) |
chr2:7546598-7548138 FORWARD
Length = 262
Score = 510 bits (1311), Expect = 1e-144
Identities = 250/261 (95%), Positives = 256/261 (98%)
Frame = +2
Query: 107 MARGLKKHLKRLNAPHHWGLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 286
MARGLKKHLKRLNAP HW LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 287 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHCIRDEEAK 466
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLH I+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 467 FKLCKVRAILLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 646
FKLCKVR+I G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 647 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 826
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 827 GKGIKLTIIEEARKRLSAQQA 889
GKGIKLTIIEEARKRLSAQQA
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261
>TAIR9_protein||AT5G07090.1 | Symbols: | 40S ribosomal protein S4 (RPS4B) |
chr5:2202410-2203805 FORWARD
Length = 263
Score = 509 bits (1310), Expect = 1e-144
Identities = 249/263 (94%), Positives = 257/263 (97%)
Frame = +2
Query: 107 MARGLKKHLKRLNAPHHWGLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 286
MARGLKKHLKRLNAP HW LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 287 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHCIRDEEAK 466
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLH I+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 467 FKLCKVRAILLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 646
FKLCKVR+I G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 647 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 826
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 827 GKGIKLTIIEEARKRLSAQQAA* 895
GKGIKLTIIEEARKRL++QQAA*
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA* 263
>TAIR9_protein||AT5G58420.1 | Symbols: | 40S ribosomal protein S4 (RPS4D) |
chr5:23619599-23620896 FORWARD
Length = 263
Score = 507 bits (1304), Expect = 7e-144
Identities = 248/263 (94%), Positives = 256/263 (97%)
Frame = +2
Query: 107 MARGLKKHLKRLNAPHHWGLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 286
MARGLKKHLKRLNAP HW LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 287 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHCIRDEEAK 466
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLH I+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 467 FKLCKVRAILLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 646
FKLCKVR+I G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLE NKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 647 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 826
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 827 GKGIKLTIIEEARKRLSAQQAA* 895
GKGIKLTIIEEARKRL++QQAA*
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA* 263
>TAIR9_protein||AT5G07090.2 | Symbols: | 40S ribosomal protein S4 (RPS4B) |
chr5:2202783-2203805 FORWARD
Length = 245
Score = 474 bits (1218), Expect = 6e-134
Identities = 232/244 (95%), Positives = 240/244 (98%)
Frame = +2
Query: 164 LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTD 343
LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTD
Sbjct: 2 LDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTD 61
Query: 344 KTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHCIRDEEAKFKLCKVRAILLGRKGIPYL 523
KTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLH I+DEEAKFKLCKVR+I G+KGIPYL
Sbjct: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYL 121
Query: 524 NTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNRE 703
NTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNRE
Sbjct: 122 NTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNRE 181
Query: 704 KHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEARKRLSAQ 883
KHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKLTIIEEARKRL++Q
Sbjct: 182 KHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQ 241
Query: 884 QAA* 895
QAA*
Sbjct: 242 QAA* 245
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,210,802,533
Number of Sequences: 33410
Number of Extensions: 7210802533
Number of Successful Extensions: 248599830
Number of sequences better than 0.0: 0
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