BLASTX 7.6.2
Query= UN13700 /QuerySize=1166
(1165 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79590.1 | Symbols: SYP52, ATSYP52 | SYP52 (SY... 407 1e-113
TAIR9_protein||AT1G79590.2 | Symbols: SYP52, ATSYP52 | SYP52 (SY... 407 1e-113
TAIR9_protein||AT1G16240.1 | Symbols: SYP51, ATSYP51 | SYP51 (SY... 382 3e-106
TAIR9_protein||AT1G16240.2 | Symbols: SYP51, ATSYP51 | SYP51 (SY... 382 3e-106
TAIR9_protein||AT1G16240.3 | Symbols: SYP51, ATSYP51 | SYP51 (SY... 306 2e-083
TAIR9_protein||AT1G16230.1 | Symbols: | syntaxin-related family... 202 4e-052
TAIR9_protein||AT1G16225.1 | Symbols: | FUNCTIONS IN: molecular... 149 3e-036
>TAIR9_protein||AT1G79590.1 | Symbols: SYP52, ATSYP52 | SYP52 (SYNTAXIN OF
PLANTS 52); SNAP receptor | chr1:29947064-29948304 FORWARD
Length = 234
Score = 407 bits (1044), Expect = 1e-113
Identities = 211/234 (90%), Positives = 221/234 (94%), Gaps = 3/234 (1%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M SSSD W+REYNEALKLSEDINGMMSERN+SG+TGPDAQRRASAIRRKITILGTRLD+L
Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60
Query: 375 QSLLV---GKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDA 545
QSLLV GKQHVSEKE+NRRKDMVGNLRSK NQVASALNMSNFANRDSL G D KPDDA
Sbjct: 61 QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120
Query: 546 MNRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDY 725
+NRVSGMDNQGIV FQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLI+DLDY
Sbjct: 121 INRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDY 180
Query: 726 HVDVTDSRLRRVQKSLAVMNKNMKGGCSCMSMLLSVLGIVGLALVIWLLVKYL* 887
VD+TDSRLRRVQKSLA+MNK+MK GCSCMSMLLSVLGIVGLALVIWLLVKYL*
Sbjct: 181 DVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL* 234
>TAIR9_protein||AT1G79590.2 | Symbols: SYP52, ATSYP52 | SYP52 (SYNTAXIN OF
PLANTS 52); SNAP receptor | chr1:29947064-29948304 FORWARD
Length = 234
Score = 407 bits (1044), Expect = 1e-113
Identities = 211/234 (90%), Positives = 221/234 (94%), Gaps = 3/234 (1%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M SSSD W+REYNEALKLSEDINGMMSERN+SG+TGPDAQRRASAIRRKITILGTRLD+L
Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60
Query: 375 QSLLV---GKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDA 545
QSLLV GKQHVSEKE+NRRKDMVGNLRSK NQVASALNMSNFANRDSL G D KPDDA
Sbjct: 61 QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120
Query: 546 MNRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDY 725
+NRVSGMDNQGIV FQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLI+DLDY
Sbjct: 121 INRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDY 180
Query: 726 HVDVTDSRLRRVQKSLAVMNKNMKGGCSCMSMLLSVLGIVGLALVIWLLVKYL* 887
VD+TDSRLRRVQKSLA+MNK+MK GCSCMSMLLSVLGIVGLALVIWLLVKYL*
Sbjct: 181 DVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL* 234
>TAIR9_protein||AT1G16240.1 | Symbols: SYP51, ATSYP51 | SYP51 (SYNTAXIN OF
PLANTS 51); SNAP receptor | chr1:5555183-5556340 REVERSE
Length = 233
Score = 382 bits (980), Expect = 3e-106
Identities = 194/233 (83%), Positives = 218/233 (93%), Gaps = 2/233 (0%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M SSSD+W+R YNEALKLSE+INGM+SER+SS VTGPDAQRRASAIRRKITI G +LD+L
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 375 QSLL--VGKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAM 548
QSLL + + +SEKE+NRRKDMVGNLRSKANQ+A+ALNMSNFANRDSLLGPD KPDD+M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 549 NRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYH 728
+RV+GMDNQGIVG+QRQVMREQDEGLE+LE TVMSTKHIALAV+EEL LQTRLI+DLDYH
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 729 VDVTDSRLRRVQKSLAVMNKNMKGGCSCMSMLLSVLGIVGLALVIWLLVKYL* 887
VDVTDSRLRRVQKSLAVMNKNM+ GCSCMSMLLSVLGIVGLA+VIW+LVKY+*
Sbjct: 181 VDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKYM* 233
>TAIR9_protein||AT1G16240.2 | Symbols: SYP51, ATSYP51 | SYP51 (SYNTAXIN OF
PLANTS 51); SNAP receptor | chr1:5555183-5556340 REVERSE
Length = 233
Score = 382 bits (980), Expect = 3e-106
Identities = 194/233 (83%), Positives = 218/233 (93%), Gaps = 2/233 (0%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M SSSD+W+R YNEALKLSE+INGM+SER+SS VTGPDAQRRASAIRRKITI G +LD+L
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 375 QSLL--VGKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAM 548
QSLL + + +SEKE+NRRKDMVGNLRSKANQ+A+ALNMSNFANRDSLLGPD KPDD+M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 549 NRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYH 728
+RV+GMDNQGIVG+QRQVMREQDEGLE+LE TVMSTKHIALAV+EEL LQTRLI+DLDYH
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 729 VDVTDSRLRRVQKSLAVMNKNMKGGCSCMSMLLSVLGIVGLALVIWLLVKYL* 887
VDVTDSRLRRVQKSLAVMNKNM+ GCSCMSMLLSVLGIVGLA+VIW+LVKY+*
Sbjct: 181 VDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKYM* 233
>TAIR9_protein||AT1G16240.3 | Symbols: SYP51, ATSYP51 | SYP51 (SYNTAXIN OF
PLANTS 51); SNAP receptor | chr1:5555193-5556340 REVERSE
Length = 229
Score = 306 bits (783), Expect = 2e-083
Identities = 156/193 (80%), Positives = 178/193 (92%), Gaps = 2/193 (1%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M SSSD+W+R YNEALKLSE+INGM+SER+SS VTGPDAQRRASAIRRKITI G +LD+L
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 375 QSLL--VGKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAM 548
QSLL + + +SEKE+NRRKDMVGNLRSKANQ+A+ALNMSNFANRDSLLGPD KPDD+M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 549 NRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYH 728
+RV+GMDNQGIVG+QRQVMREQDEGLE+LE TVMSTKHIALAV+EEL LQTRLI+DLDYH
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 729 VDVTDSRLRRVQK 767
VDVTDSRLR ++
Sbjct: 181 VDVTDSRLRSAEE 193
Score = 50 bits (117), Expect = 3e-006
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 761 AEEPSGDEQEYERRLLVHVNAIVSAWNRWSCSCHLAAG* 877
AEEP EQEYE+ LL+HVNA+VSA +R SC C++ G*
Sbjct: 191 AEEPCCHEQEYEKWLLLHVNALVSAGDRRSCCCNMDVG* 229
>TAIR9_protein||AT1G16230.1 | Symbols: | syntaxin-related family protein |
chr1:5553467-5554324 REVERSE
Length = 194
Score = 202 bits (513), Expect = 4e-052
Identities = 112/189 (59%), Positives = 139/189 (73%), Gaps = 4/189 (2%)
Frame = +3
Query: 195 MGSSSDAWIREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL 374
M S D+WIRE NE LKLSE+I+GM+ ER+S T A R AS++RRKITIL TR+ TL
Sbjct: 1 MASLCDSWIREQNETLKLSEEIDGMILERSSLAETSSYALRHASSMRRKITILATRVQTL 60
Query: 375 QSLLVGKQ--HVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAM 548
+ LL Q +S KE++RRK NLRSKANQ+ASAL+M F+N D LL P+ DD M
Sbjct: 61 KYLLAESQGKSISGKEMSRRKGTFENLRSKANQMASALDMLKFSNIDILLRPE--KDDIM 118
Query: 549 NRVSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYH 728
+RV G+DNQGIVG RQVM+E DE L+ LEETVM KH AL +NE++ LQTRLI+ LD+H
Sbjct: 119 SRVIGLDNQGIVGLHRQVMKEHDEALDMLEETVMRVKHNALVMNEQIGLQTRLIDGLDHH 178
Query: 729 VDVTDSRLR 755
VDV+DS +R
Sbjct: 179 VDVSDSGVR 187
>TAIR9_protein||AT1G16225.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil region
(InterPro:IPR000727); BEST Arabidopsis thaliana protein match is:
syntaxin-related family protein (TAIR:AT1G16230.1); Has 85 Blast hits
to 85 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 22; Plants - 56; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink). | chr1:5551041-5552028 REVERSE
Length = 200
Score = 149 bits (376), Expect = 3e-036
Identities = 91/171 (53%), Positives = 117/171 (68%), Gaps = 6/171 (3%)
Frame = +3
Query: 267 MMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTLQSLLVGKQ--HVSEKEVNRRKDMV 440
M+ ER+S T A+ AS +RRKITIL + TL++LL Q +S KE++R KDMV
Sbjct: 1 MILERSSLAETSSYARGHASYMRRKITILANGVQTLKNLLAESQGKSISAKEMSRCKDMV 60
Query: 441 GNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAMNRVSGMDNQGIVGFQRQVMREQDE 620
+LRSKA Q+ASAL+M F+N SLLG DD M+RV MDNQ IVGFQR M+ QD+
Sbjct: 61 EDLRSKAYQMASALDMLKFSNIGSLLG----QDDIMSRVIDMDNQEIVGFQRTTMKVQDK 116
Query: 621 GLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYHVDVTDSRLRRVQKSL 773
LE LE+ VM K ALA+N EL LQTRLI+ LD+HVDV+ S + +Q+S+
Sbjct: 117 ALEMLEKGVMHLKREALAMNMELGLQTRLIDRLDHHVDVSASDVEELQRSI 167
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,232,316,549
Number of Sequences: 33410
Number of Extensions: 7232316549
Number of Successful Extensions: 248605574
Number of sequences better than 0.0: 0
|
