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SwissProt blast output of UN13742


BLASTX 7.6.2

Query= UN13742 /QuerySize=1660
        (1659 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P...    173   6e-042
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P...    139   5e-032
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-...    134   2e-030
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie...    101   2e-020
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P...    101   2e-020
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB...     72   1e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=...     72   1e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=...     72   1e-011
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ...     72   1e-011
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho...     71   2e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical...     71   2e-011
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r...     70   4e-011
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G...     69   7e-011
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric...     69   1e-010
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ...     69   1e-010
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus...     69   1e-010
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra...     69   1e-010
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xeno...     68   2e-010
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote...     68   2e-010
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...     68   2e-010

>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1

          Length = 375

 Score =  173 bits (436), Expect = 6e-042
 Identities = 81/172 (47%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
 Frame = +3

Query: 237 DPSTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS--YGFVHYFDQRSAGL 410
           D    R++Y GN+   VTEVL+ ++F+  GP +SCK+I +  S+  Y FV +++ R A  
Sbjct:   4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63

Query: 411 AIMSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTC 587
           A+ ++NGR + G+ +KVNWA   + Q++DTS+HF++FVGDLSPE+T   +  +F+ F   
Sbjct:  64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123

Query: 588 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATK 743
           SDARV+ D  TG+S+G+GFVSF N+ DA+ AI  M G+W+  RQIR NWAT+
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175

>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1

          Length = 392

 Score =  139 bits (350), Expect = 5e-032
 Identities = 63/126 (50%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +3

Query: 369 YGFVHYFDQRSAGLAIMSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPEVT 545
           Y FV +++ R A  A+ ++NGR + G+ +KVNWA   + Q++DTS+HF++FVGDLSPE+T
Sbjct:  67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 126

Query: 546 DAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIR 725
              +  +F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA+ AI  M G+W+  RQIR
Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 186

Query: 726 CNWATK 743
            NWAT+
Sbjct: 187 TNWATR 192

>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
        PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3

          Length = 453

 Score =  134 bits (337), Expect = 2e-030
 Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
 Frame = +3

Query: 207 LPSGNLPPGFDPSTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLI--RKDKS-SYGF 377
           +P+  +  G + S  R +Y GN+   +TE +L++ F   GP+ + K++  + +K+ +Y F
Sbjct:  61 VPANAITGGRETSD-RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAF 119

Query: 378 VHYFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL 557
           V Y     A +A+ +LNG+ +    +K+NWA+ + Q+  +   FN+FVGDL+  V D  L
Sbjct: 120 VEYHQSHDANIALQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETL 178

Query: 558 FESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
             +F  F +     VMWD +TG SRG+GFVSF +Q DAQ A++ M G+ ++ R +R NWA
Sbjct: 179 RNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238

Query: 738 TK 743
            K
Sbjct: 239 AK 240

>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
        SV=3

          Length = 386

 Score =  101 bits (251), Expect = 2e-020
 Identities = 46/99 (46%), Positives = 67/99 (67%)
 Frame = +3

Query: 495 TSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 674
           +  HF++FVGDLSPE+T   +  +F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161

Query: 675 TAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSV 791
            AI +M G+W+  RQIR NWAT+     +  + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200

>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1

          Length = 386

 Score =  101 bits (251), Expect = 2e-020
 Identities = 46/99 (46%), Positives = 67/99 (67%)
 Frame = +3

Query: 495 TSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 674
           +  HF++FVGDLSPE+T   +  +F+ F   SDARV+ D  TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161

Query: 675 TAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSV 791
            AI +M G+W+  RQIR NWAT+     +  + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200

>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1

          Length = 448

 Score =  72 bits (174), Expect = 1e-011
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           F IF GDL  EV D  L  +FS F +   A+V+ D++TG+++G+GFVSF++  D   A+ 
Sbjct: 349 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 408

Query: 687 EMNGKWISSRQIR 725
           EMNGK++ SR I+
Sbjct: 409 EMNGKYVGSRPIK 421

>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
        SV=1

          Length = 480

 Score =  72 bits (174), Expect = 1e-011
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           F IF GDL  EV D  L  +FS F +   A+V+ D++TG+++G+GFVSF++  D   A+ 
Sbjct: 381 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 440

Query: 687 EMNGKWISSRQIR 725
           EMNGK++ SR I+
Sbjct: 441 EMNGKYVGSRPIK 453

>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
        SV=1

          Length = 474

 Score =  72 bits (174), Expect = 1e-011
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           F IF GDL  EV D  L  +FS F +   A+V+ D++TG+++G+GFVSF++  D   A+ 
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434

Query: 687 EMNGKWISSRQIR 725
           EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447

>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
        SV=1

          Length = 474

 Score =  72 bits (174), Expect = 1e-011
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           F IF GDL  EV D  L  +FS F +   A+V+ D++TG+++G+GFVSF++  D   A+ 
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434

Query: 687 EMNGKWISSRQIR 725
           EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447

>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
        OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1

          Length = 158

 Score =  71 bits (173), Expect = 2e-011
 Identities = 35/73 (47%), Positives = 52/73 (71%)
 Frame = +3

Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
           +F+G LS    DA+L ++F+ F    DA+V+ D++TGRSRGFGFV+F ++  A  AI+EM
Sbjct:  37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96

Query: 693 NGKWISSRQIRCN 731
           +GK ++ R IR N
Sbjct:  97 DGKELNGRHIRVN 109

>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
        PE=2 SV=1

          Length = 392

 Score =  71 bits (173), Expect = 2e-011
 Identities = 34/76 (44%), Positives = 51/76 (67%)
 Frame = +3

Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
           S  F IF GDL  EV D  L  +FS + +   A+V+ D++TG+++G+GFVSF++  D   
Sbjct: 290 SDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVR 349

Query: 678 AINEMNGKWISSRQIR 725
           A+ EMNGK++ SR I+
Sbjct: 350 AMREMNGKYVGSRPIK 365

>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2

          Length = 402

 Score =  70 bits (170), Expect = 4e-011
 Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +3

Query: 459 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGF 638
           V+W   T   E  +  F IF GDL  EV D  L  +FS + +   A+V+ D++TG+++G+
Sbjct: 288 VSWE-DTSLLEWETDDFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGY 346

Query: 639 GFVSFRNQQDAQTAINEMNGKWISSRQIR 725
           GFVSF++  D   A+ EMNG+++ SR I+
Sbjct: 347 GFVSFKDPNDYVRAMREMNGRYVGSRPIK 375

>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
        SV=1

          Length = 392

 Score =  69 bits (168), Expect = 7e-011
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           F IF GDL  EV D  L  +FS + +   A+V+ D++TG+++G+GFVSF++  D   A  
Sbjct: 293 FRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRATR 352

Query: 687 EMNGKWISSRQIR 725
           EMNGK++ SR I+
Sbjct: 353 EMNGKYVGSRPIK 365

>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
        GN=CIRBP PE=2 SV=1

          Length = 172

 Score =  69 bits (166), Expect = 1e-010
 Identities = 37/84 (44%), Positives = 52/84 (61%)
 Frame = +3

Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
           S    +FVG LS +  + AL + FS +   S+  V+ D++T RSRGFGFV+F N  DA+ 
Sbjct:   3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
           A+  MNGK +  RQIR + A K +
Sbjct:  63 AMMAMNGKSVDGRQIRVDQAGKSS 86

>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
        GN=Cirbp PE=1 SV=1

          Length = 172

 Score =  69 bits (166), Expect = 1e-010
 Identities = 37/84 (44%), Positives = 52/84 (61%)
 Frame = +3

Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
           S    +FVG LS +  + AL + FS +   S+  V+ D++T RSRGFGFV+F N  DA+ 
Sbjct:   3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
           A+  MNGK +  RQIR + A K +
Sbjct:  63 AMMAMNGKSVDGRQIRVDQAGKSS 86

>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
        GN=Cirbp PE=2 SV=1

          Length = 172

 Score =  69 bits (166), Expect = 1e-010
 Identities = 37/84 (44%), Positives = 52/84 (61%)
 Frame = +3

Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
           S    +FVG LS +  + AL + FS +   S+  V+ D++T RSRGFGFV+F N  DA+ 
Sbjct:   3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
           A+  MNGK +  RQIR + A K +
Sbjct:  63 AMMAMNGKSVDGRQIRVDQAGKSS 86

>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
        GN=GRP10 PE=2 SV=1

          Length = 169

 Score =  69 bits (166), Expect = 1e-010
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +3

Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
           +  FVG L+    DA L  +FS F    D++++ D++TGRSRGFGFV+F++++  + AI+
Sbjct:   6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65

Query: 687 EMNGKWISSRQIRCNWA 737
           EMNGK +  R I  N A
Sbjct:  66 EMNGKELDGRTITVNEA 82

>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis
        GN=cirbp PE=2 SV=1

          Length = 166

 Score =  68 bits (164), Expect = 2e-010
 Identities = 34/79 (43%), Positives = 53/79 (67%)
 Frame = +3

Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
           +FVG L+ E T+ +L + FS +   ++  V+ D+++ RSRGFGFV+F N +DA+ A+  M
Sbjct:   8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67

Query: 693 NGKWISSRQIRCNWATKGA 749
           NGK +  RQIR + A K +
Sbjct:  68 NGKSVDGRQIRVDQAGKSS 86

>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
        OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1

          Length = 414

 Score =  68 bits (164), Expect = 2e-010
 Identities = 38/105 (36%), Positives = 54/105 (51%)
 Frame = +3

Query: 483 QREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 662
           + E+T     IFVG LS  + D  L + F        ARV++++ T RSRG+G+V F N+
Sbjct: 160 KNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENK 219

Query: 663 QDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVVE 797
             A+ AI EM GK I  R I C+ +T       D+    G +  E
Sbjct: 220 SYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSE 264

>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
        thaliana GN=RBP29 PE=1 SV=2

          Length = 342

 Score =  68 bits (164), Expect = 2e-010
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +3

Query: 384 YFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFE 563
           Y  +R  G       G   +G   + ++   +G    + S   ++VG+LS  V D AL  
Sbjct: 218 YGSERGGGYGSQRSGGG--YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALEN 275

Query: 564 SFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
            F+      +ARV++D+ +GRS+GFGFV+  + Q+ Q AIN +NG  +  RQIR + A
Sbjct: 276 LFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,281,224,270
Number of Sequences: 518415
Number of Extensions: 55281224270
Number of Successful Extensions: 373770181
Number of sequences better than 0.0: 0