BLASTX 7.6.2
Query= UN13742 /QuerySize=1660
(1659 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 173 6e-042
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 139 5e-032
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 134 2e-030
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 101 2e-020
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 101 2e-020
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 72 1e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 72 1e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 72 1e-011
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 72 1e-011
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 71 2e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 71 2e-011
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 70 4e-011
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 69 7e-011
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 69 1e-010
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 69 1e-010
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 69 1e-010
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 69 1e-010
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xeno... 68 2e-010
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 68 2e-010
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 68 2e-010
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 173 bits (436), Expect = 6e-042
Identities = 81/172 (47%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Frame = +3
Query: 237 DPSTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS--YGFVHYFDQRSAGL 410
D R++Y GN+ VTEVL+ ++F+ GP +SCK+I + S+ Y FV +++ R A
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 411 AIMSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTC 587
A+ ++NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSPE+T + +F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 588 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATK 743
SDARV+ D TG+S+G+GFVSF N+ DA+ AI M G+W+ RQIR NWAT+
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 139 bits (350), Expect = 5e-032
Identities = 63/126 (50%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Frame = +3
Query: 369 YGFVHYFDQRSAGLAIMSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPEVT 545
Y FV +++ R A A+ ++NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSPE+T
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 126
Query: 546 DAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIR 725
+ +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+ AI M G+W+ RQIR
Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 186
Query: 726 CNWATK 743
NWAT+
Sbjct: 187 TNWATR 192
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3
Length = 453
Score = 134 bits (337), Expect = 2e-030
Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Frame = +3
Query: 207 LPSGNLPPGFDPSTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLI--RKDKS-SYGF 377
+P+ + G + S R +Y GN+ +TE +L++ F GP+ + K++ + +K+ +Y F
Sbjct: 61 VPANAITGGRETSD-RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAF 119
Query: 378 VHYFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL 557
V Y A +A+ +LNG+ + +K+NWA+ + Q+ + FN+FVGDL+ V D L
Sbjct: 120 VEYHQSHDANIALQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETL 178
Query: 558 FESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
+F F + VMWD +TG SRG+GFVSF +Q DAQ A++ M G+ ++ R +R NWA
Sbjct: 179 RNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238
Query: 738 TK 743
K
Sbjct: 239 AK 240
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 101 bits (251), Expect = 2e-020
Identities = 46/99 (46%), Positives = 67/99 (67%)
Frame = +3
Query: 495 TSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 674
+ HF++FVGDLSPE+T + +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 675 TAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSV 791
AI +M G+W+ RQIR NWAT+ + + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 101 bits (251), Expect = 2e-020
Identities = 46/99 (46%), Positives = 67/99 (67%)
Frame = +3
Query: 495 TSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 674
+ HF++FVGDLSPE+T + +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 675 TAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSV 791
AI +M G+W+ RQIR NWAT+ + + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 72 bits (174), Expect = 1e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
F IF GDL EV D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 349 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 408
Query: 687 EMNGKWISSRQIR 725
EMNGK++ SR I+
Sbjct: 409 EMNGKYVGSRPIK 421
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 72 bits (174), Expect = 1e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
F IF GDL EV D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 381 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 440
Query: 687 EMNGKWISSRQIR 725
EMNGK++ SR I+
Sbjct: 441 EMNGKYVGSRPIK 453
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 72 bits (174), Expect = 1e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
F IF GDL EV D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 687 EMNGKWISSRQIR 725
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 72 bits (174), Expect = 1e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
F IF GDL EV D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 687 EMNGKWISSRQIR 725
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 71 bits (173), Expect = 2e-011
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 693 NGKWISSRQIRCN 731
+GK ++ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 71 bits (173), Expect = 2e-011
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +3
Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
S F IF GDL EV D L +FS + + A+V+ D++TG+++G+GFVSF++ D
Sbjct: 290 SDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVR 349
Query: 678 AINEMNGKWISSRQIR 725
A+ EMNGK++ SR I+
Sbjct: 350 AMREMNGKYVGSRPIK 365
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 70 bits (170), Expect = 4e-011
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +3
Query: 459 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGF 638
V+W T E + F IF GDL EV D L +FS + + A+V+ D++TG+++G+
Sbjct: 288 VSWE-DTSLLEWETDDFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGY 346
Query: 639 GFVSFRNQQDAQTAINEMNGKWISSRQIR 725
GFVSF++ D A+ EMNG+++ SR I+
Sbjct: 347 GFVSFKDPNDYVRAMREMNGRYVGSRPIK 375
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 69 bits (168), Expect = 7e-011
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
F IF GDL EV D L +FS + + A+V+ D++TG+++G+GFVSF++ D A
Sbjct: 293 FRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRATR 352
Query: 687 EMNGKWISSRQIR 725
EMNGK++ SR I+
Sbjct: 353 EMNGKYVGSRPIK 365
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 69 bits (166), Expect = 1e-010
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
S +FVG LS + + AL + FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=1 SV=1
Length = 172
Score = 69 bits (166), Expect = 1e-010
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
S +FVG LS + + AL + FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 69 bits (166), Expect = 1e-010
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 498 SSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 677
S +FVG LS + + AL + FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 678 AINEMNGKWISSRQIRCNWATKGA 749
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 69 bits (166), Expect = 1e-010
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
+ FVG L+ DA L +FS F D++++ D++TGRSRGFGFV+F++++ + AI+
Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65
Query: 687 EMNGKWISSRQIRCNWA 737
EMNGK + R I N A
Sbjct: 66 EMNGKELDGRTITVNEA 82
>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis
GN=cirbp PE=2 SV=1
Length = 166
Score = 68 bits (164), Expect = 2e-010
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+FVG L+ E T+ +L + FS + ++ V+ D+++ RSRGFGFV+F N +DA+ A+ M
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 693 NGKWISSRQIRCNWATKGA 749
NGK + RQIR + A K +
Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1
Length = 414
Score = 68 bits (164), Expect = 2e-010
Identities = 38/105 (36%), Positives = 54/105 (51%)
Frame = +3
Query: 483 QREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 662
+ E+T IFVG LS + D L + F ARV++++ T RSRG+G+V F N+
Sbjct: 160 KNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENK 219
Query: 663 QDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVVE 797
A+ AI EM GK I R I C+ +T D+ G + E
Sbjct: 220 SYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSE 264
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 68 bits (164), Expect = 2e-010
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +3
Query: 384 YFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFE 563
Y +R G G +G + ++ +G + S ++VG+LS V D AL
Sbjct: 218 YGSERGGGYGSQRSGGG--YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALEN 275
Query: 564 SFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
F+ +ARV++D+ +GRS+GFGFV+ + Q+ Q AIN +NG + RQIR + A
Sbjct: 276 LFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,281,224,270
Number of Sequences: 518415
Number of Extensions: 55281224270
Number of Successful Extensions: 373770181
Number of sequences better than 0.0: 0
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