BLASTX 7.6.2
Query= UN13742 /QuerySize=1660
(1659 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 749 1e-216
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 743 7e-215
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 701 5e-202
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 657 9e-189
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 653 1e-187
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 75 8e-014
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 75 8e-014
TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (... 72 1e-012
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 71 2e-012
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 71 2e-012
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 71 2e-012
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 71 2e-012
TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-bindin... 70 3e-012
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 70 4e-012
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 68 2e-011
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 68 2e-011
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 67 3e-011
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 64 2e-010
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 64 2e-010
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 64 2e-010
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 749 bits (1933), Expect = 1e-216
Identities = 366/425 (86%), Positives = 396/425 (93%), Gaps = 10/425 (2%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQAMMQQQHHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRS 257
+++ Q Q+ + QQAM+QQAMM QQH SLYHP +MA PPQMEPLPSGNLPPGFDP+TCRS
Sbjct: 8 KQQQQQQQQQHQQAMIQQAMM-QQHPSLYHPGVMA--PPQMEPLPSGNLPPGFDPTTCRS 64
Query: 258 VYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDQRSAGLAIMSLNGRH 437
VYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSSYGFVHYFD+R A +AIM+LNGRH
Sbjct: 65 VYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRH 124
Query: 438 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQK 617
+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALF+SFS FN+CSDARVMWDQK
Sbjct: 125 IFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQK 184
Query: 618 TGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVVE 797
TGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGATFGEDKHSSDGKSVVE
Sbjct: 185 TGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVE 244
Query: 798 LTNG-SEDGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRMFHALGAGVIEEVRV 974
LTNG SEDGRE +SNE+APENNPQ+TTVYVGNL+PEVTQLDLHR+F+ LGAGVIEEVRV
Sbjct: 245 LTNGSSEDGRE--LSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRV 302
Query: 975 QRDKGFGFVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGSKPTPTGTASNPLPPPAPVP 1154
QRDKGFGFVRYNTHDEAALAIQMGN+QPFLFSR I+CSWG+KPTP+GTASNPLPPPAP
Sbjct: 303 QRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPAS 362
Query: 1155 VPGLSPMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAAMYDGGFQNVAAAHQQL 1322
VP LS MDLLAYERQLALAKMHPQAQHSLR VN AG +AAMYDGG+QNVAAAHQQL
Sbjct: 363 VPSLSAMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 422
Query: 1323 MYYQ* 1337
MYYQ*
Sbjct: 423 MYYQ* 427
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 743 bits (1918), Expect = 7e-215
Identities = 366/429 (85%), Positives = 396/429 (92%), Gaps = 14/429 (3%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQAMMQQQHHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRS 257
+++ Q Q+ + QQAM+QQAMM QQH SLYHP +MA PPQMEPLPSGNLPPGFDP+TCRS
Sbjct: 8 KQQQQQQQQQHQQAMIQQAMM-QQHPSLYHPGVMA--PPQMEPLPSGNLPPGFDPTTCRS 64
Query: 258 VYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDQRSAGLAIMSLNGRH 437
VYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSSYGFVHYFD+R A +AIM+LNGRH
Sbjct: 65 VYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRH 124
Query: 438 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCS----DARVM 605
+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALF+SFS FN+CS DARVM
Sbjct: 125 IFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVM 184
Query: 606 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGK 785
WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGATFGEDKHSSDGK
Sbjct: 185 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGK 244
Query: 786 SVVELTNG-SEDGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRMFHALGAGVIE 962
SVVELTNG SEDGRE +SNE+APENNPQ+TTVYVGNL+PEVTQLDLHR+F+ LGAGVIE
Sbjct: 245 SVVELTNGSSEDGRE--LSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIE 302
Query: 963 EVRVQRDKGFGFVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGSKPTPTGTASNPLPPP 1142
EVRVQRDKGFGFVRYNTHDEAALAIQMGN+QPFLFSR I+CSWG+KPTP+GTASNPLPPP
Sbjct: 303 EVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPP 362
Query: 1143 APVPVPGLSPMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAAMYDGGFQNVAAA 1310
AP VP LS MDLLAYERQLALAKMHPQAQHSLR VN AG +AAMYDGG+QNVAAA
Sbjct: 363 APASVPSLSAMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAA 422
Query: 1311 HQQLMYYQ* 1337
HQQLMYYQ*
Sbjct: 423 HQQLMYYQ* 431
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 701 bits (1807), Expect = 5e-202
Identities = 358/433 (82%), Positives = 379/433 (87%), Gaps = 21/433 (4%)
Frame = +3
Query: 87 MQNQRLKQ-QQAMMQQAMMQQ----QHHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTC 251
MQN RLKQ QQ QQAMMQQ Q HSLYHP ++A PPQ+EP+PSGNLPPGFDPSTC
Sbjct: 1 MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLA--PPQLEPVPSGNLPPGFDPSTC 58
Query: 252 RSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDQRSAGLAIMSLNG 431
RSVY GNIHTQVTE LLQEIF STGPVES KLIRKDKSSYGFVHYFD+RSA LAI+SLNG
Sbjct: 59 RSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNG 118
Query: 432 RHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWD 611
RHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDA L++SFS F++CSDARVMWD
Sbjct: 119 RHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWD 178
Query: 612 QKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSV 791
QKTGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGAT G+DK SSDGKSV
Sbjct: 179 QKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSV 238
Query: 792 VELTNG-SEDGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRMFHALGAGVIEEV 968
VELT G SEDG+E NEE PENN Q+TTVYVGNLAPEVTQLDLHR FHALGAGVIEEV
Sbjct: 239 VELTTGSSEDGKE--TLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEV 296
Query: 969 RVQRDKGFGFVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGSKPTPTGTASNPLPPPAP 1148
RVQRDKGFGFVRYNTH EAALAIQMGN+QP+LF+R IKCSWG+KPTP GTASNPLPPPAP
Sbjct: 297 RVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAP 356
Query: 1149 VPVPGLSPMDLLAYERQLALAK-------MHPQAQHSLRH---VNAAGASAAMYDGGFQN 1298
PVPGLS DLL YERQLAL+K MH Q QH LR +NAAGA+AAMYDGGFQN
Sbjct: 357 APVPGLSAADLLNYERQLALSKMASVNALMHQQGQHPLRQAHGINAAGATAAMYDGGFQN 416
Query: 1299 VAAAHQQLMYYQ* 1337
VAAA QQLMYYQ*
Sbjct: 417 VAAA-QQLMYYQ* 428
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 657 bits (1693), Expect = 9e-189
Identities = 328/425 (77%), Positives = 364/425 (85%), Gaps = 21/425 (4%)
Frame = +3
Query: 96 QRLKQQQAMMQQAMMQQQHHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGNI 275
Q+ +QQQ MMQQA+MQQQ SLYHP L+A PPQ+EP+PSGNLPPGFDPSTCRSVY GNI
Sbjct: 6 QQQQQQQVMMQQALMQQQ--SLYHPGLLA--PPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 276 HTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDQRSAGLAIMSLNGRHLFGQPI 455
H QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFD+RSAGLAI+SLNGRHLFGQPI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 456 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRG 635
KVNWAYA+GQREDTSSHFNIFVGDLSPEVTDA LF FS + TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 636 FGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVVELTNG-S 812
FGFVSFRNQQDAQTAI+E+ GKW+ SRQIRCNWATKGAT GEDK SSD KSVVELT+G S
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVS 241
Query: 813 EDGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRMFHALGAGVIEEVRVQRDKGF 992
EDG++ +N EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGF
Sbjct: 242 EDGKD--TTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGF 299
Query: 993 GFVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGSKPTPTGTASNPLPPPAPVPVPGLSP 1172
GFVRY+TH EAALAIQMGN+ +L R +KCSWGSKPTP GTASNPLPPPAP P+PG S
Sbjct: 300 GFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSA 359
Query: 1173 MDLLAYERQLALAKM--------HPQAQHSLRH--VNAAGASAAMYDGGFQNVAAAHQQL 1322
DLLAYERQLA++KM HPQ QH+ + + A G++ A+YDGG+QN QQL
Sbjct: 360 SDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQNA----QQL 415
Query: 1323 MYYQ* 1337
MYYQ*
Sbjct: 416 MYYQ* 420
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 653 bits (1683), Expect = 1e-187
Identities = 326/424 (76%), Positives = 362/424 (85%), Gaps = 22/424 (5%)
Frame = +3
Query: 96 QRLKQQQAMMQQAMMQQQHHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGNI 275
Q+ +QQQ MMQQA+MQQQ SLYHP L+A PPQ+EP+PSGNLPPGFDPSTCRSVY GNI
Sbjct: 6 QQQQQQQVMMQQALMQQQ--SLYHPGLLA--PPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 276 HTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDQRSAGLAIMSLNGRHLFGQPI 455
H QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFD+RSAGLAI+SLNGRHLFGQPI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 456 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRG 635
KVNWAYA+GQREDTSSHFNIFVGDLSPEVTDA LF FS + TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 636 FGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSE 815
FGFVSFRNQQDAQTAI+E+ GKW+ SRQIRCNWATKGAT GEDK SSD KSVVELT+G
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG-- 239
Query: 816 DGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRMFHALGAGVIEEVRVQRDKGFG 995
DG++ +N EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGFG
Sbjct: 240 DGKD--TTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFG 297
Query: 996 FVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGSKPTPTGTASNPLPPPAPVPVPGLSPM 1175
FVRY+TH EAALAIQMGN+ +L R +KCSWGSKPTP GTASNPLPPPAP P+PG S
Sbjct: 298 FVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSAS 357
Query: 1176 DLLAYERQLALAKM--------HPQAQHSLRH--VNAAGASAAMYDGGFQNVAAAHQQLM 1325
DLLAYERQLA++KM HPQ QH+ + + A G++ A+YDGG+QN QQLM
Sbjct: 358 DLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQNA----QQLM 413
Query: 1326 YYQ* 1337
YYQ*
Sbjct: 414 YYQ* 417
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 75 bits (184), Expect = 8e-014
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+FVG LS D++L ++F+ F ++A V+ D++TGRSRGFGFVSF + A AI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 693 NGKWISSRQIRCNWATK 743
+GK ++ RQIR N AT+
Sbjct: 97 DGKELNGRQIRVNLATE 113
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 75 bits (184), Expect = 8e-014
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+FVG LS D++L ++F+ F ++A V+ D++TGRSRGFGFVSF + A AI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 693 NGKWISSRQIRCNWATK 743
+GK ++ RQIR N AT+
Sbjct: 97 DGKELNGRQIRVNLATE 113
>TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:1212065-1213795 REVERSE
Length = 246
Score = 72 bits (174), Expect = 1e-012
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
+ +F GDL EV D L ++F+ F T + A+V+ D++TG+++G+GFVSF N D A+
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALK 196
Query: 687 EMNGKWISSRQIR 725
EMNGK++ +R I+
Sbjct: 197 EMNGKYVGNRPIK 209
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 71 bits (173), Expect = 2e-012
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 693 NGKWISSRQIRCN 731
+GK ++ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 71 bits (173), Expect = 2e-012
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 693 NGKWISSRQIRCN 731
+GK ++ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 71 bits (173), Expect = 2e-012
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 693 NGKWISSRQIRCN 731
+GK ++ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 71 bits (173), Expect = 2e-012
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 693 NGKWISSRQIRCN 731
+GK ++ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein |
chr5:1192461-1195413 FORWARD
Length = 311
Score = 70 bits (171), Expect = 3e-012
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
IFVG LSPEVTD L +FS F D ++M ++ TGRSRGFGF++F +++ +I EM
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 693 NGKWISSRQIRCNWATK--GATFGEDKHSSDGK 785
+G+ R I N A G GE S G+
Sbjct: 69 HGRDFGDRVISVNRAEPKLGRDDGESHGSRGGR 101
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 70 bits (170), Expect = 4e-012
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
++VG+LSP TD L E+FSG+ DA VM D+ T RSRGFGFV++ + +A+ A++ M
Sbjct: 5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGM 64
Query: 693 NGKWISSRQI 722
+GK ++ R++
Sbjct: 65 DGKELNGRRV 74
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 68 bits (164), Expect = 2e-011
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +3
Query: 384 YFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFE 563
Y +R G G +G + ++ +G + S ++VG+LS V D AL
Sbjct: 218 YGSERGGGYGSQRSGGG--YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALEN 275
Query: 564 SFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
F+ +ARV++D+ +GRS+GFGFV+ + Q+ Q AIN +NG + RQIR + A
Sbjct: 276 LFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 68 bits (164), Expect = 2e-011
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +3
Query: 384 YFDQRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFE 563
Y +R G G +G + ++ +G + S ++VG+LS V D AL
Sbjct: 218 YGSERGGGYGSQRSGGG--YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALEN 275
Query: 564 SFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWA 737
F+ +ARV++D+ +GRS+GFGFV+ + Q+ Q AIN +NG + RQIR + A
Sbjct: 276 LFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 67 bits (162), Expect = 3e-011
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+++G LSP + +L ++FS FN ++ARVM ++ TGRSRG+GFV+F ++ A +AI+ M
Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92
Query: 693 NGKWISSRQIRCNWA 737
NG+ ++ I N A
Sbjct: 93 NGQELNGFNISVNVA 107
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 64 bits (155), Expect = 2e-010
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +3
Query: 471 YATGQREDTSSHFNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVS 650
Y G S ++VG+LS V D AL FS +ARV++D+ +GRS+GFGFV+
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVT 251
Query: 651 FRNQQDAQTAINEMNGKWISSRQIRCNWA 737
+ + Q+ Q AI ++G + RQIR + A
Sbjct: 252 YDSSQEVQNAIKSLDGADLDGRQIRVSEA 280
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 64 bits (155), Expect = 2e-010
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = +3
Query: 513 IFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 692
+F+G LS V + +L ++FS F ++ R+ +D+ +GRSRGFGFV F + DA +A + M
Sbjct: 43 LFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAM 102
Query: 693 NGKWISSRQIRCNWA 737
+GK + R +R ++A
Sbjct: 103 DGKGLLGRPLRISFA 117
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 64 bits (155), Expect = 2e-010
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 507 FNIFVGDLSPEVTDAALFESFSGFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 686
+ FVG L+ D L +FS F D++++ D+++GRSRGFGFV+F++++ + AI
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65
Query: 687 EMNGKWISSRQIRCNWATKGATFG 758
EMNGK + R I N A + G
Sbjct: 66 EMNGKELDGRVITVNEAQSRGSGG 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,253,900,872
Number of Sequences: 33410
Number of Extensions: 7253900872
Number of Successful Extensions: 248611356
Number of sequences better than 0.0: 0
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