BLASTX 7.6.2
Query= UN13751 /QuerySize=1001
(1000 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 268 4e-071
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 132 3e-030
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 132 3e-030
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 131 1e-029
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 84 1e-015
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 83 3e-015
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 82 5e-015
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 80 3e-014
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 79 3e-014
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 78 8e-014
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 75 6e-013
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 72 4e-012
>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia
oleracea GN=PSRP2 PE=1 SV=1
Length = 260
Score = 268 bits (685), Expect = 4e-071
Identities = 140/243 (57%), Positives = 175/243 (72%), Gaps = 10/243 (4%)
Frame = -1
Query: 883 FHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATMETEEKPALDPNAES 704
F S++ LQS +N F LK K S + P + R + + + + E
Sbjct: 28 FSSQNLVQLQSFSNGFGLKLKTRVS-----TNPPLLKVRAVVTEETSSSSTASSSSDGEG 82
Query: 703 SRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVI 524
+RR+Y+GNIPR + N++L +VEEHGA+E +VMYDKYSGRSRRFGF TMK+VEDANAVI
Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVI 142
Query: 523 EKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTK 344
EKLN T I GR++KVNITEKP+E D++ Q+ED+ FV+SPYKVY+GNLAK+VT
Sbjct: 143 EKLNDTEIGGRKIKVNITEKPLEGM-----DIATTQAEDSQFVESPYKVYIGNLAKTVTN 197
Query: 343 EMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILAFNNSLLEGQKIRV 164
E+L+ F EKGKVL AKV R PGTSK GFGFV+FSS+E+VEAAI A NNS+LEGQKIRV
Sbjct: 198 ELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257
Query: 163 NKA 155
NKA
Sbjct: 258 NKA 260
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 132 bits (332), Expect = 3e-030
Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 13/246 (5%)
Frame = -1
Query: 853 SQTNAFALKAKAFPSVPTAISLPRTS-RTRLIPRATM----ETEEKPALDPNAESSR--- 698
SQT + + + S+ ++S P + +R + + T+ + E+ D E R
Sbjct: 25 SQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIEDVEDGDEGVEEERNFS 84
Query: 697 ---RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 527
++++GN+ + + L +L E G VE V+V+YDK +GRSR FGF TM S E+ A
Sbjct: 85 PDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 526 IEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQ--SEDAAFVDSPYKVYVGNLAKS 353
++ NG ++GR ++VN P + +SS + S + S DS +VYVGNLA
Sbjct: 145 CQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWG 204
Query: 352 VTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILAFNNSLLEGQK 173
V ++ LE+LF E+GKV+ AKV + + GFGFVT+SS E+V AI + + L G+
Sbjct: 205 VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRA 264
Query: 172 IRVNKA 155
IRV+ A
Sbjct: 265 IRVSPA 270
Score = 73 bits (178), Expect = 2e-012
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -1
Query: 709 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 530
+SS RVY+GN+ V + L L E G V +V+YD+ SGRSR FGF T S E+ N
Sbjct: 191 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 250
Query: 529 VIEKLNGTTIEGREVKVNITE 467
IE L+G + GR ++V+ E
Sbjct: 251 AIESLDGVDLNGRAIRVSPAE 271
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 132 bits (332), Expect = 3e-030
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Frame = -1
Query: 715 NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDA 536
N ++++GN+P + + L +L E G VE V+V+YDK +GRSR FGF TM S E+
Sbjct: 82 NFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141
Query: 535 NAVIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAK 356
A ++ NG ++GR ++VN P + +SS S DS +VYVGNLA
Sbjct: 142 EAACQQFNGYELDGRALRVNSGPPPEKRENSSFRG----GSRGGGSFDSSNRVYVGNLAW 197
Query: 355 SVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILAFNNSLLEGQ 176
V ++ LE+LF E+GKV+ AKV + + GFGFVT+SS E+V AI + + L G+
Sbjct: 198 GVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 257
Query: 175 KIRVNKA 155
IRV+ A
Sbjct: 258 AIRVSPA 264
Score = 73 bits (178), Expect = 2e-012
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -1
Query: 709 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 530
+SS RVY+GN+ V + L L E G V +V+YD+ SGRSR FGF T S E+ N
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244
Query: 529 VIEKLNGTTIEGREVKVNITE 467
IE L+G + GR ++V+ E
Sbjct: 245 AIESLDGVDLNGRAIRVSPAE 265
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 131 bits (328), Expect = 1e-029
Identities = 71/195 (36%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Frame = -1
Query: 739 EEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFA 560
E++ ++ + R+Y+GN+P ++T+ QL+++ E G V V+++YD+ + RSR F F
Sbjct: 101 EKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFV 160
Query: 559 TMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDSPYK 380
TM SVE+A I +G+ + GR VKVN E P + ++S FVDSP+K
Sbjct: 161 TMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVP--RGGEREVMSAKIRSTYQGFVDSPHK 218
Query: 379 VYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILAF 200
+YV NL+ ++T + L F ++ +SAKV + + GFGF+TFSS E + +A+
Sbjct: 219 LYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM 278
Query: 199 NNSLLEGQKIRVNKA 155
N LEG+ +R+N A
Sbjct: 279 NEVELEGRPLRLNVA 293
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 84 bits (207), Expect = 1e-015
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -1
Query: 709 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 530
E + RVY+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 529 VIEKLNGTTIEGREVKVNITEK 464
I L+G +EGR ++VN+ E+
Sbjct: 301 AISALDGQNLEGRAIRVNVAEE 322
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 83 bits (203), Expect = 3e-015
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Frame = -1
Query: 907 SIKP----TLFSFHSES-STSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATME 743
S+KP + FS S S + SL S + + K F S ++R L +E
Sbjct: 21 SLKPNSTLSFFSLPSSSLNLSLSSSSIGHSASIKPFES-------SFSTRVALSDFDQLE 73
Query: 742 TEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGF 563
+ + A P ++++GN+P +V + L L E G VE V+V+YDK SGRSR FGF
Sbjct: 74 DDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGF 133
Query: 562 ATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSS 440
TM + E+ A ++ NG I+GR ++VN P + +SS
Sbjct: 134 VTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSS 174
Score = 74 bits (179), Expect = 2e-012
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = -1
Query: 715 NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDA 536
+ +SS RVY+GN+ V + L +L E G V +V+YD+ SGRSR FGF T S ++
Sbjct: 203 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262
Query: 535 NAVIEKLNGTTIEGREVKVNITEK 464
N I+ LNG ++GR ++V+ E+
Sbjct: 263 NDAIDSLNGIDLDGRSIRVSAAEE 286
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 82 bits (201), Expect = 5e-015
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Frame = -1
Query: 907 SIKP-TLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATMETEEK 731
S+KP + SF S S+SL ++ + + ++ S +R L +E + +
Sbjct: 21 SLKPNSTLSFFSLPSSSLNLSLSSSSTGLCSIKPFESSFS----TRVALSGFDQLEDDVE 76
Query: 730 PALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMK 551
A P ++++GN+P +V + L L E G VE V+V+YDK +GRSR FGF TM
Sbjct: 77 VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMS 136
Query: 550 SVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSS 440
+ E+ A ++ NG I+GR ++VN P + +SS
Sbjct: 137 TKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSS 173
Score = 73 bits (178), Expect = 2e-012
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = -1
Query: 715 NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDA 536
+ +SS RVY+GN+ V + L +L E G V +V+YD+ SGRSR FGF T S ++
Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261
Query: 535 NAVIEKLNGTTIEGREVKVNITEK 464
N I+ LNG ++GR ++V+ E+
Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEE 285
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 80 bits (195), Expect = 3e-014
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = -1
Query: 736 EKPALDPNA-ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFA 560
E+P P E S R+Y+GNIP + + +L +L EHG V +V+YD+ +GRSR FGF
Sbjct: 217 ERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFV 276
Query: 559 TMKSVEDANAVIEKLNGTTIEGREVKVNITE 467
TM S + + I L+G +++GR ++VN+ E
Sbjct: 277 TMASEAEMSDAIANLDGQSLDGRTIRVNVAE 307
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 79 bits (194), Expect = 3e-014
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = -1
Query: 760 PRATMETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGR 581
PR + E + +P S RVY+GN+P V +L +L EHG V +V+ D+ +GR
Sbjct: 133 PRGSPERAPRGDFEP----SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGR 188
Query: 580 SRRFGFATMKSVEDANAVIEKLNGTTIEGREVKVNITEK 464
SR FGF TM S + N I L+G T++GR V+VN+ E+
Sbjct: 189 SRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEE 227
Score = 68 bits (165), Expect = 8e-011
Identities = 37/76 (48%), Positives = 47/76 (61%)
Frame = -1
Query: 382 KVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILA 203
+VYVGNL V LE LF E GKV+SA+V T + GFGFVT SS+ +V AI A
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209
Query: 202 FNNSLLEGQKIRVNKA 155
+ L+G+ +RVN A
Sbjct: 210 LDGQTLDGRAVRVNVA 225
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 78 bits (191), Expect = 8e-014
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -1
Query: 730 PALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMK 551
P + + + ++++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM
Sbjct: 81 PPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMS 140
Query: 550 SVEDANAVIEKLNGTTIEGREVKVNITEKP 461
SV + A ++ NG ++GR ++VN P
Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPP 170
Score = 66 bits (160), Expect = 3e-010
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = -1
Query: 712 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 533
A S RVY+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T S ++
Sbjct: 200 AGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQ 259
Query: 532 AVIEKLNGTTIEGREVKVNITE 467
I+ L+G ++GR+++V+ E
Sbjct: 260 NAIKSLDGADLDGRQIRVSEAE 281
Score = 66 bits (159), Expect = 4e-010
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = -1
Query: 382 KVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILA 203
+VYVGNL+ V LESLF E+GKV+ A+V + + GFGFVT+ S ++V+ AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 202 FNNSLLEGQKIRVNKA 155
+ + L+G++IRV++A
Sbjct: 265 LDGADLDGRQIRVSEA 280
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 75 bits (183), Expect = 6e-013
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = -1
Query: 697 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 518
R+Y+GNIP + + +L ++ EHG V +V++D+ SGRSR FGF TM S + + I
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 517 LNGTTIEGREVKVNITEK 464
L+G T++GR ++VN E+
Sbjct: 252 LDGQTLDGRTIRVNAAEE 269
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 72 bits (176), Expect = 4e-012
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1
Query: 697 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 518
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 517 LNGTTIEGREVKVNITEKPIESSSSSS 437
NG EGR ++VN P + S S
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFS 186
Score = 68 bits (164), Expect = 1e-010
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 706 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 527
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 526 IEKLNGTTIEGREVKVNITE 467
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,281,224,270
Number of Sequences: 518415
Number of Extensions: 55281224270
Number of Successful Extensions: 373770181
Number of sequences better than 0.0: 0
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