BLASTX 7.6.2
Query= UN13751 /QuerySize=1001
(1000 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 386 1e-107
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 386 1e-107
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 142 5e-034
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 84 1e-016
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 78 7e-015
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 75 4e-014
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 72 4e-013
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 72 4e-013
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 62 7e-010
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 386 bits (991), Expect = 1e-107
Identities = 206/259 (79%), Positives = 229/259 (88%), Gaps = 9/259 (3%)
Frame = -1
Query: 925 FLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATM 746
FLT VVSIKPT+FSF SES T L ++ N F+ +K FPS+ S R+SRTR IP A
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNVFS--SKPFPSLAGTFS--RSSRTRFIPYAVT 59
Query: 745 ETEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRF 569
ETEEKP ALDP++E++RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRF
Sbjct: 60 ETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119
Query: 568 GFATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDS 389
GFATMKSVEDANAV+EKLNG T+EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDS
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDS 175
Query: 388 PYKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAI 209
PYKVYVGNLAK+VTKEMLE+LF EKGKV+SAKVSRVPGTSK TGFGFVTFSS+EDVEAAI
Sbjct: 176 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAI 235
Query: 208 LAFNNSLLEGQKIRVNKA* 152
+A NNSLLEGQKIRVNKA*
Sbjct: 236 VALNNSLLEGQKIRVNKA* 254
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 386 bits (991), Expect = 1e-107
Identities = 206/259 (79%), Positives = 229/259 (88%), Gaps = 9/259 (3%)
Frame = -1
Query: 925 FLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATM 746
FLT VVSIKPT+FSF SES T L ++ N F+ +K FPS+ S R+SRTR IP A
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNVFS--SKPFPSLAGTFS--RSSRTRFIPYAVT 59
Query: 745 ETEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRF 569
ETEEKP ALDP++E++RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRF
Sbjct: 60 ETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119
Query: 568 GFATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDS 389
GFATMKSVEDANAV+EKLNG T+EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDS
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDS 175
Query: 388 PYKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAI 209
PYKVYVGNLAK+VTKEMLE+LF EKGKV+SAKVSRVPGTSK TGFGFVTFSS+EDVEAAI
Sbjct: 176 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAI 235
Query: 208 LAFNNSLLEGQKIRVNKA* 152
+A NNSLLEGQKIRVNKA*
Sbjct: 236 VALNNSLLEGQKIRVNKA* 254
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 142 bits (356), Expect = 5e-034
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Frame = -1
Query: 745 ETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFG 566
E EE+ + R+Y+GN+P T+T+ +L+++ E G V VQ++YDK + RSR FG
Sbjct: 101 EVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFG 160
Query: 565 FATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAAFVDSP 386
F TM S+E+A ++ N + I GR VKVN E P + + ++ + ++VDSP
Sbjct: 161 FVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVP--RGGENEVMRTKIRDNNRSYVDSP 218
Query: 385 YKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAIL 206
+KVY GNL ++T + L+ F ++ VL AKV T + GFGF++F S E+V++A+
Sbjct: 219 HKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALA 278
Query: 205 AFNNSLLEGQKIRVNKA 155
N +EG+ +R+N A
Sbjct: 279 TMNGVEVEGRALRLNLA 295
Score = 61 bits (146), Expect = 1e-009
Identities = 30/103 (29%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = -1
Query: 709 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 530
+S +VY GN+ +T++ L + V +V+Y++ +GRSR FGF + +S E+ +
Sbjct: 216 DSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQS 275
Query: 529 VIEKLNGTTIEGREVKVNITEKPIESSSSSSPDLSLLQSEDAA 401
+ +NG +EGR +++N+ + E + S P + ++E+A+
Sbjct: 276 ALATMNGVEVEGRALRLNLASER-EKPTVSPPSVEEGETEEAS 317
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 84 bits (207), Expect = 1e-016
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -1
Query: 709 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 530
E + RVY+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 529 VIEKLNGTTIEGREVKVNITEK 464
I L+G +EGR ++VN+ E+
Sbjct: 301 AISALDGQNLEGRAIRVNVAEE 322
Score = 64 bits (154), Expect = 1e-010
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = -1
Query: 385 YKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAIL 206
++VYVGNL V LE LF E GKV+ A+V T + GFGFVT S +++ AI
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 205 AFNNSLLEGQKIRVNKA 155
A + LEG+ IRVN A
Sbjct: 304 ALDGQNLEGRAIRVNVA 320
Score = 61 bits (147), Expect = 9e-010
Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = -1
Query: 499 EGREVKVNITEKPIESSSSSSPDLSL-LQSEDAAFVD--SPYKVYVGNLAKSVTKEMLES 329
EG E + + +E + S D+S SE A F + K++VGNLA V + L
Sbjct: 109 EGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAM 168
Query: 328 LFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILAFNNSLLEGQKIRVNKA 155
LF + G V A+V T + GFGFVT SS ++ E A+ FN L G+ + VNKA
Sbjct: 169 LFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKA 226
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 78 bits (191), Expect = 7e-015
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -1
Query: 730 PALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMK 551
P + + + ++++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM
Sbjct: 81 PPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMS 140
Query: 550 SVEDANAVIEKLNGTTIEGREVKVNITEKP 461
SV + A ++ NG ++GR ++VN P
Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPP 170
Score = 66 bits (160), Expect = 3e-011
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = -1
Query: 712 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 533
A S RVY+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T S ++
Sbjct: 200 AGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQ 259
Query: 532 AVIEKLNGTTIEGREVKVNITE 467
I+ L+G ++GR+++V+ E
Sbjct: 260 NAIKSLDGADLDGRQIRVSEAE 281
Score = 66 bits (159), Expect = 4e-011
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = -1
Query: 382 KVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILA 203
+VYVGNL+ V LESLF E+GKV+ A+V + + GFGFVT+ S ++V+ AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 202 FNNSLLEGQKIRVNKA 155
+ + L+G++IRV++A
Sbjct: 265 LDGADLDGRQIRVSEA 280
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 75 bits (184), Expect = 4e-014
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = -1
Query: 784 RTSRTRLIPRATMETEEKPALDPNA-ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQ 608
R + R PR + +P P +++ R+Y+GN+P V + +L +L EHG V +
Sbjct: 183 RLTVNRAAPRGS-----RPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDAR 237
Query: 607 VMYDKYSGRSRRFGFATMKSVEDANAVIEKLNGTTIEGREVKVNITEK 464
V+ D+ +GRSR FGF M + + N I L+G +EGR +KVN+ E+
Sbjct: 238 VVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEE 285
Score = 66 bits (159), Expect = 4e-011
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = -1
Query: 394 DSPYKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEA 215
D+ +++YVGNL V LE LF E GKV+ A+V T + GFGFV S++ +V
Sbjct: 204 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 263
Query: 214 AILAFNNSLLEGQKIRVNKA 155
AI A + LEG+ I+VN A
Sbjct: 264 AIAALDGQNLEGRAIKVNVA 283
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 72 bits (176), Expect = 4e-013
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1
Query: 697 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 518
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 517 LNGTTIEGREVKVNITEKPIESSSSSS 437
NG EGR ++VN P + S S
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFS 186
Score = 68 bits (164), Expect = 9e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 706 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 527
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 526 IEKLNGTTIEGREVKVNITE 467
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
Score = 65 bits (158), Expect = 5e-011
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = -1
Query: 382 KVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILA 203
++YVGNL+ V LE+LF E+GKV+ A+V + + GFGFVT SS ++V+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 202 FNNSLLEGQKIRVNKA 155
N + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 72 bits (176), Expect = 4e-013
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1
Query: 697 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 518
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 517 LNGTTIEGREVKVNITEKPIESSSSSS 437
NG EGR ++VN P + S S
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFS 186
Score = 68 bits (164), Expect = 9e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 706 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 527
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 526 IEKLNGTTIEGREVKVNITE 467
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
Score = 65 bits (158), Expect = 5e-011
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = -1
Query: 382 KVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFSSDEDVEAAILA 203
++YVGNL+ V LE+LF E+GKV+ A+V + + GFGFVT SS ++V+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 202 FNNSLLEGQKIRVNKA 155
N + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 62 bits (148), Expect = 7e-010
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -1
Query: 733 KPALDP-NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFAT 557
KP +P E+ ++++GN+ TVT+E L E G V +V++D +GRSR +GF
Sbjct: 165 KPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVC 224
Query: 556 MKSVEDANAVIEKLNGTTIEGREVKVNITE 467
S + +E L+G +EGR ++VN+ +
Sbjct: 225 YSSKAEMETALESLDGFELEGRAIRVNLAQ 254
Score = 60 bits (145), Expect = 1e-009
Identities = 32/87 (36%), Positives = 54/87 (62%)
Frame = -1
Query: 415 SEDAAFVDSPYKVYVGNLAKSVTKEMLESLFFEKGKVLSAKVSRVPGTSKFTGFGFVTFS 236
+++ + ++ +K++VGNL+ +VT E L F E G V+ A+V T + G+GFV +S
Sbjct: 167 NKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYS 226
Query: 235 SDEDVEAAILAFNNSLLEGQKIRVNKA 155
S ++E A+ + + LEG+ IRVN A
Sbjct: 227 SKAEMETALESLDGFELEGRAIRVNLA 253
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,253,900,872
Number of Sequences: 33410
Number of Extensions: 7253900872
Number of Successful Extensions: 248611356
Number of sequences better than 0.0: 0
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