BLASTX 7.6.2
Query= UN13762 /QuerySize=1077
(1076 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing p... 414 8e-116
TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing p... 315 3e-086
TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing p... 309 2e-084
TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing p... 263 2e-070
TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing p... 258 7e-069
TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing p... 258 7e-069
TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing p... 258 7e-069
TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing p... 258 7e-069
TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing p... 258 7e-069
TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing p... 235 5e-062
TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcripti... 213 2e-055
TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing p... 173 2e-043
>TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing protein |
chr1:282919-284082 FORWARD
Length = 206
Score = 414 bits (1062), Expect = 8e-116
Identities = 190/206 (92%), Positives = 197/206 (95%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT DKCN CDKTVYV+DMLSIEGMPYHKSCF+CTHCKGTL MSNYSSMDGVLYCKT
Sbjct: 1 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60
Query: 479 HFEQLFKESGNFSKNFQPGKTEKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEKVQME 658
HFEQLFKESGNFSKNFQPGKTEKPE +TPSKISSIFCGTQDKCAACEKTVYPLEK+QME
Sbjct: 61 HFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQME 120
Query: 659 GECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHRRTAS 838
GECFHKTCF+CAHGGCTLTHSSYASLD VLYCRHHFNQLF+EKGNYAHVLQAANHRRTAS
Sbjct: 121 GECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180
Query: 839 GNTLPPETTEEVAVEAKEENDVSES* 916
GNTLPPE TE+VAVEAKEEN VSES*
Sbjct: 181 GNTLPPEPTEDVAVEAKEENGVSES* 206
>TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing protein |
chr2:18858153-18859007 REVERSE
Length = 227
Score = 315 bits (807), Expect = 3e-086
Identities = 153/214 (71%), Positives = 173/214 (80%), Gaps = 9/214 (4%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT DKC ACDKTVYVMD+L++EG YHKSCF+CTHCKGTLV+SNYSSMDGVLYCK
Sbjct: 1 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQPGKTEKPEQN--KTPSKISSIFCGTQDKCAACEKTVYPLEKVQ 652
HFEQLFKESGN+SKNFQ GKTEKP + +TPSK+SS F GTQDKCA C+KTVYPLEKV
Sbjct: 61 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120
Query: 653 MEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQ-AANHRR 829
MEGE +HKTCF+C H GC LTHSSYASL+GVLYC+ HFNQLFLEKG+Y HV Q AANHRR
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180
Query: 830 TA-SGNTLPPETTEE-----VAVEAKEENDVSES 913
+A SG PP + EAKE++ E+
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPEA 214
>TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing protein |
chr3:22664601-22665503 REVERSE
Length = 214
Score = 309 bits (791), Expect = 2e-084
Identities = 150/218 (68%), Positives = 175/218 (80%), Gaps = 18/218 (8%)
Frame = +2
Query: 302 SFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKTH 481
+FTGTTDKC ACDKTVYVMD++++EGMPYHKSCF+C+HC GTLV+ NYSSMDGVLYCKTH
Sbjct: 3 AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62
Query: 482 FEQLFKESGNFSKNFQ-PGKTEKP-EQNKTPSKISSIFCGTQDKCAACEKTVYPLEKVQM 655
FEQLFKESGNFSKNFQ GKTEK + K P+++SS F GTQDKCAAC+KTVYPLEK+ M
Sbjct: 63 FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122
Query: 656 EGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQ-AANHRRT 832
EGE +HKTCF+CAH GC LTHSSYA+LDGVLYC+ HF+QLFLEKGNY HVLQ AANHRR+
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182
Query: 833 ASGNTLPPETTEEVAVEAKE------ENDVSES*KQKH 928
T EE E KE E + S++ ++H
Sbjct: 183 ---------TAEEDKTEPKEDEANPTEEETSDAAAEEH 211
Score = 99 bits (245), Expect = 4e-021
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = +2
Query: 251 QTKKPQKRKRERKQKRMSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTL 430
+T+K + + F+GT DKC AC KTVY ++ +++EG YHK+CF+C H L
Sbjct: 82 KTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPL 141
Query: 431 VMSNYSSMDGVLYCKTHFEQLFKESGNFSKNFQPGKTEK---PEQNKTPSK 574
S+Y+++DGVLYCK HF QLF E GN++ Q + E++KT K
Sbjct: 142 THSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRSTAEEDKTEPK 192
>TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing protein |
chr2:16659136-16660267 FORWARD
Length = 201
Score = 263 bits (671), Expect = 2e-070
Identities = 115/188 (61%), Positives = 155/188 (82%), Gaps = 5/188 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHK+CFKC+HCK L +SNYSSM+GV+YC+
Sbjct: 1 MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGK--TEK--PEQNKTPSKISSIFCGTQDKCAACEKTVYPLE 643
HFEQLFKESG+FSKNFQ P K T+K PE N+TPS+++ +F GTQDKCA C KTVYP+E
Sbjct: 61 HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120
Query: 644 KVQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANH 823
KV +E +C+HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180
Query: 824 RRTASGNT 847
+R + T
Sbjct: 181 KRATAAAT 188
>TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 258 bits (657), Expect = 7e-069
Identities = 112/184 (60%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 VQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHR 826
V +E + +HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+ +
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180
Query: 827 RTAS 838
R+A+
Sbjct: 181 RSAA 184
>TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 258 bits (657), Expect = 7e-069
Identities = 112/184 (60%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 VQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHR 826
V +E + +HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+ +
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180
Query: 827 RTAS 838
R+A+
Sbjct: 181 RSAA 184
>TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 258 bits (657), Expect = 7e-069
Identities = 112/184 (60%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 VQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHR 826
V +E + +HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+ +
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180
Query: 827 RTAS 838
R+A+
Sbjct: 181 RSAA 184
>TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 258 bits (657), Expect = 7e-069
Identities = 112/184 (60%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 VQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHR 826
V +E + +HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+ +
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180
Query: 827 RTAS 838
R+A+
Sbjct: 181 RSAA 184
>TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 258 bits (657), Expect = 7e-069
Identities = 112/184 (60%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 VQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHVLQAANHR 826
V +E + +HK+CFKC+HGGC ++ S+YA+L+G+LYC+HHF QLF EKG+Y H++++A+ +
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180
Query: 827 RTAS 838
R+A+
Sbjct: 181 RSAA 184
>TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing protein |
chr2:18858153-18858823 REVERSE
Length = 196
Score = 235 bits (598), Expect = 5e-062
Identities = 121/181 (66%), Positives = 137/181 (75%), Gaps = 10/181 (5%)
Frame = +2
Query: 398 CFKCTHCKGTLVMSNYSSMDGVLYCKTHFEQLFKESGNFSKNFQPGKTEKPEQN--KTPS 571
CFK H T + SNYSSMDGVLYCK HFEQLFKESGN+SKNFQ GKTEKP + +TPS
Sbjct: 4 CFKRPHLFLTQI-SNYSSMDGVLYCKPHFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPS 62
Query: 572 KISSIFCGTQDKCAACEKTVYPLEKVQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLY 751
K+SS F GTQDKCA C+KTVYPLEKV MEGE +HKTCF+C H GC LTHSSYASL+GVLY
Sbjct: 63 KLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLY 122
Query: 752 CRHHFNQLFLEKGNYAHVLQ-AANHRRTA-SGNTLPPETTEE-----VAVEAKEENDVSE 910
C+ HFNQLFLEKG+Y HV Q AANHRR+A SG PP + EAKE++ E
Sbjct: 123 CKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 182
Query: 911 S 913
+
Sbjct: 183 A 183
>TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc
ion binding | chr1:3346677-3347763 REVERSE
Length = 191
Score = 213 bits (541), Expect = 2e-055
Identities = 91/175 (52%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
M+F GTT KC ACDKTVY++D L+ + YHK+CF+C HCKGTL +SNY+S +GVLYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 479 HFEQLFKESGNFSKNFQP----GKTEKPEQNKTP--SKISSIFCGTQDKCAACEKTVYPL 640
HF+Q FK +G+ K+F+ GK ++P + + P +K+S++F GT++KC C+KTVYP+
Sbjct: 61 HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120
Query: 641 EKVQMEGECFHKTCFKCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAHV 805
EKV + G +HK+CFKC HGGCT++ S+Y + +G LYC+HH QL EKGN + +
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
>TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing protein |
chr3:20703799-20704614 FORWARD
Length = 128
Score = 173 bits (438), Expect = 2e-043
Identities = 79/121 (65%), Positives = 97/121 (80%), Gaps = 4/121 (3%)
Frame = +2
Query: 299 MSFTGTTDKCNACDKTVYVMDMLSIEGMPYHKSCFKCTHCKGTLVMSNYSSMDGVLYCKT 478
MSFTGT KC AC+KTVY +++LS +G+ YHKSCFKCTHCK L +S+YSSM+GVLYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60
Query: 479 HFEQLFKESGNFSKNFQ-PGKT---EKPEQNKTPSKISSIFCGTQDKCAACEKTVYPLEK 646
HFEQLFKESG+F+KNFQ P K+ PE +TPS+++ F GTQ+KCA C KTVYP+EK
Sbjct: 61 HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120
Query: 647 V 649
V
Sbjct: 121 V 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,253,900,872
Number of Sequences: 33410
Number of Extensions: 7253900872
Number of Successful Extensions: 248611356
Number of sequences better than 0.0: 0
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