BLASTX 7.6.2
Query= UN13803 /QuerySize=1443
(1442 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 553 1e-157
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 553 1e-157
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 377 1e-104
TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CI... 363 2e-100
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 357 1e-098
TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RN... 346 3e-095
TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacti... 319 3e-087
TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interac... 318 8e-087
TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTI... 301 1e-081
TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTI... 290 2e-078
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 553 bits (1424), Expect = 1e-157
Identities = 283/352 (80%), Positives = 311/352 (88%), Gaps = 7/352 (1%)
Frame = -2
Query: 1381 MAVAENAGLKVDSSGQNLDNNNTSSSASDTTTN--PSDDQSPKSDSFLDSSDPPTPDSDD 1208
MAVAENAG+KVDSSGQNLDNNNT++SA++TT P DDQSPKSDS + TP++DD
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 1207 RTNETAGKSQTVNGF--NGGDGVKGEIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRN 1034
R NETA K QT+NGF NG GEIK+L+DAFSKLNPMA+EFVPPSLARSQS GV RN
Sbjct: 61 RINETAQKVQTLNGFSGNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQS-GVLRN 119
Query: 1033 GLGFTNGFTAAQPVVVADGNGQFARRRRSFGQGRRRVNKRTSLAQKEDVIKRTVYVSDID 854
GLGFTN F A P +ADGN F RRRRSFGQG+RR+NKRTSLAQK+DVI+RTVYVSDID
Sbjct: 120 GLGFTNNFAA--PPKLADGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDID 177
Query: 853 HQVTEENLAGVFVNCGQVVDCRVCGDTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPL 674
QVTEENLAGVF+NCGQVVDCRVCGD NS+LRFAF+EFTNEEGARAALSMSGTVLGFYPL
Sbjct: 178 QQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPL 237
Query: 673 KVLPSKTAIAPVNPTFLPRSEGEREMCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR 494
KVLPSKTAIAPVNPTFLPRSE EREMC+RTVYCTNIDKRI+Q++LKGFFEM+CGEV RLR
Sbjct: 238 KVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR 297
Query: 493 LGDYHNHTRIAFVEFAMADSAITALHCSGMVLGALPIRVSPSKTPVRPHLHR 338
LGDYH+ TRIAFVEFAMA+SAI ALHCSG+VLGALPIRVSPSKTPVRPH R
Sbjct: 298 LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 553 bits (1424), Expect = 1e-157
Identities = 283/352 (80%), Positives = 311/352 (88%), Gaps = 7/352 (1%)
Frame = -2
Query: 1381 MAVAENAGLKVDSSGQNLDNNNTSSSASDTTTN--PSDDQSPKSDSFLDSSDPPTPDSDD 1208
MAVAENAG+KVDSSGQNLDNNNT++SA++TT P DDQSPKSDS + TP++DD
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 1207 RTNETAGKSQTVNGF--NGGDGVKGEIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRN 1034
R NETA K QT+NGF NG GEIK+L+DAFSKLNPMA+EFVPPSLARSQS GV RN
Sbjct: 61 RINETAQKVQTLNGFSGNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQS-GVLRN 119
Query: 1033 GLGFTNGFTAAQPVVVADGNGQFARRRRSFGQGRRRVNKRTSLAQKEDVIKRTVYVSDID 854
GLGFTN F A P +ADGN F RRRRSFGQG+RR+NKRTSLAQK+DVI+RTVYVSDID
Sbjct: 120 GLGFTNNFAA--PPKLADGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDID 177
Query: 853 HQVTEENLAGVFVNCGQVVDCRVCGDTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPL 674
QVTEENLAGVF+NCGQVVDCRVCGD NS+LRFAF+EFTNEEGARAALSMSGTVLGFYPL
Sbjct: 178 QQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPL 237
Query: 673 KVLPSKTAIAPVNPTFLPRSEGEREMCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR 494
KVLPSKTAIAPVNPTFLPRSE EREMC+RTVYCTNIDKRI+Q++LKGFFEM+CGEV RLR
Sbjct: 238 KVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR 297
Query: 493 LGDYHNHTRIAFVEFAMADSAITALHCSGMVLGALPIRVSPSKTPVRPHLHR 338
LGDYH+ TRIAFVEFAMA+SAI ALHCSG+VLGALPIRVSPSKTPVRPH R
Sbjct: 298 LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 377 bits (966), Expect = 1e-104
Identities = 207/362 (57%), Positives = 256/362 (70%), Gaps = 22/362 (6%)
Frame = -2
Query: 1381 MAVAEN--AGLKVDSSG---QNLDNNNTSSSASDTTTNPSDDQSPKSDSFLDSSDPPTPD 1217
MAV E A D+ G Q ++ SS S + SDDQ+ S D
Sbjct: 1 MAVVETGAAATAADAGGVVIQPPPSSPPSSMTSQDSGVSSDDQNHHS-----RIDQVLRH 55
Query: 1216 SDDRTNETAGKSQTVNGFNGGDGVKGEIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSR 1037
++ +G +GG+ K +++ L + FSKLNPMA+EFVPPSL ++ GG
Sbjct: 56 DQGLYSKIGSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSL--NKQGGNGV 113
Query: 1036 NGLGFT--------NGFTAAQPVVVADGNGQFARRRRSFGQGRRRVNKRTSLAQKEDVIK 881
NG FT NGF + NG F RR++SFGQG+RR+N RTS+AQ+EDVI+
Sbjct: 114 NGGFFTSAGSFFRNNGFAGTGNGGYGNENGGF-RRKKSFGQGKRRMNARTSMAQREDVIR 172
Query: 880 RTVYVSDIDHQVTEENLAGVFVNCGQVVDCRVCGDTNSILRFAFVEFTNEEGARAALSMS 701
RTVYVSD+D QVTEE LAG+FV+CGQVVDCR+CGD NS+LRFAF+EFT+EEGA AL++S
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLS 232
Query: 700 GTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGEREMCLRTVYCTNIDKRISQVELKGFFEM 521
GT+LGFYP+KVLPSKTAIAPVNPTFLPR+E EREMC RT+YCTNIDK+++Q ++K FFE
Sbjct: 233 GTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFES 292
Query: 520 ICGEVFRLR-LGDYHNHTRIAFVEFAMADSAITALHCSGMVLGALPIRVSPSKTPVRPHL 344
CGEV+RLR LGDY + TRIAFVEF MA+SAI AL+CSG+VLG+LPIRVSPSKTPVRP
Sbjct: 293 FCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS 352
Query: 343 HR 338
R
Sbjct: 353 PR 354
Score = 72 bits (174), Expect = 1e-012
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -2
Query: 898 KEDVIKRTVYVSDIDHQVTEENLAGVFVN-CGQVVDCRVCGDTNSILRFAFVEFTNEEGA 722
+ ++ RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 264 EREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESA 323
Query: 721 RAALSMSGTVLGFYPLKVLPSKTAIAPVNP 632
AAL+ SG VLG P++V PSKT + P +P
Sbjct: 324 IAALNCSGVVLGSLPIRVSPSKTPVRPRSP 353
>TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CID12; RNA
binding | chr4:6557336-6559143 FORWARD
Length = 337
Score = 363 bits (931), Expect = 2e-100
Identities = 188/323 (58%), Positives = 240/323 (74%), Gaps = 6/323 (1%)
Frame = -2
Query: 1309 SSASDTTTNPSDDQSPKSDSFLDSSDPPTPDSDDRTNETAGKSQTVN--GFNGGDGVKGE 1136
S ++TT SP S + S + ++D V+ +GG+ K +
Sbjct: 6 SVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHGGNGIHDEIGVHVARSDGGESFKRD 65
Query: 1135 IKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRNGLGFTNGFTAAQPVVVADGNGQFARR 956
++ L + SKLNPMAKEF+PPSL + G + NGF AA V + +G F RR
Sbjct: 66 MRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNE-DGSF-RR 123
Query: 955 RRSFG-QGRRRVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVNCGQVVDCRVCG 779
++SFG QG+RR+N RTSLAQ+E++I+RTVYVSDID QVTEE LAG+F+ GQVVDCR+CG
Sbjct: 124 KKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICG 183
Query: 778 DTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGERE 599
D NS+LRFAF+EFT+E GAR AL++SGT+LGFYP+KV+PSKTAIAPVNPTFLPR+E ERE
Sbjct: 184 DPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDERE 243
Query: 598 MCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFVEFAMADSAITA 422
MC RT+YCTNIDK+++Q ++K FFE +CGEV+RLR LGDYH+ TRI FVEF MA+SAI A
Sbjct: 244 MCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAA 303
Query: 421 LHCSGMVLGALPIRVSPSKTPVR 353
L+CSG++LG+LPIRVSPSKTPVR
Sbjct: 304 LNCSGVLLGSLPIRVSPSKTPVR 326
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 357 bits (915), Expect = 1e-098
Identities = 197/350 (56%), Positives = 246/350 (70%), Gaps = 22/350 (6%)
Frame = -2
Query: 1381 MAVAEN--AGLKVDSSG---QNLDNNNTSSSASDTTTNPSDDQSPKSDSFLDSSDPPTPD 1217
MAV E A D+ G Q ++ SS S + SDDQ+ S D
Sbjct: 1 MAVVETGAAATAADAGGVVIQPPPSSPPSSMTSQDSGVSSDDQNHHS-----RIDQVLRH 55
Query: 1216 SDDRTNETAGKSQTVNGFNGGDGVKGEIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSR 1037
++ +G +GG+ K +++ L + FSKLNPMA+EFVPPSL ++ GG
Sbjct: 56 DQGLYSKIGSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSL--NKQGGNGV 113
Query: 1036 NGLGFT--------NGFTAAQPVVVADGNGQFARRRRSFGQGRRRVNKRTSLAQKEDVIK 881
NG FT NGF + NG F RR++SFGQG+RR+N RTS+AQ+EDVI+
Sbjct: 114 NGGFFTSAGSFFRNNGFAGTGNGGYGNENGGF-RRKKSFGQGKRRMNARTSMAQREDVIR 172
Query: 880 RTVYVSDIDHQVTEENLAGVFVNCGQVVDCRVCGDTNSILRFAFVEFTNEEGARAALSMS 701
RTVYVSD+D QVTEE LAG+FV+CGQVVDCR+CGD NS+LRFAF+EFT+EEGA AL++S
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLS 232
Query: 700 GTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGEREMCLRTVYCTNIDKRISQVELKGFFEM 521
GT+LGFYP+KVLPSKTAIAPVNPTFLPR+E EREMC RT+YCTNIDK+++Q ++K FFE
Sbjct: 233 GTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFES 292
Query: 520 ICGEVFRLR-LGDYHNHTRIAFVEFAMADSAITALHCSGMVLGALPIRVS 374
CGEV+RLR LGDY + TRIAFVEF MA+SAI AL+CSG+VLG+LPIR S
Sbjct: 293 FCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342
>TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RNA binding |
chr4:6557336-6559019 FORWARD
Length = 327
Score = 346 bits (886), Expect = 3e-095
Identities = 179/314 (57%), Positives = 231/314 (73%), Gaps = 6/314 (1%)
Frame = -2
Query: 1309 SSASDTTTNPSDDQSPKSDSFLDSSDPPTPDSDDRTNETAGKSQTVN--GFNGGDGVKGE 1136
S ++TT SP S + S + ++D V+ +GG+ K +
Sbjct: 6 SVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHGGNGIHDEIGVHVARSDGGESFKRD 65
Query: 1135 IKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRNGLGFTNGFTAAQPVVVADGNGQFARR 956
++ L + SKLNPMAKEF+PPSL + G + NGF AA V + +G F RR
Sbjct: 66 MRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNE-DGSF-RR 123
Query: 955 RRSFG-QGRRRVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVNCGQVVDCRVCG 779
++SFG QG+RR+N RTSLAQ+E++I+RTVYVSDID QVTEE LAG+F+ GQVVDCR+CG
Sbjct: 124 KKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICG 183
Query: 778 DTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGERE 599
D NS+LRFAF+EFT+E GAR AL++SGT+LGFYP+KV+PSKTAIAPVNPTFLPR+E ERE
Sbjct: 184 DPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDERE 243
Query: 598 MCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFVEFAMADSAITA 422
MC RT+YCTNIDK+++Q ++K FFE +CGEV+RLR LGDYH+ TRI FVEF MA+SAI A
Sbjct: 244 MCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAA 303
Query: 421 LHCSGMVLGALPIR 380
L+CSG++LG+LPIR
Sbjct: 304 LNCSGVLLGSLPIR 317
>TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacting Domain 9);
RNA binding / protein binding | chr3:4849788-4851601 FORWARD
Length = 328
Score = 319 bits (817), Expect = 3e-087
Identities = 165/280 (58%), Positives = 204/280 (72%), Gaps = 17/280 (6%)
Frame = -2
Query: 1138 EIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRNGLGFTNGFTAAQ--PVVVADGNGQF 965
++ L F KLNP+AKEF P ++ V++ N F A +F
Sbjct: 49 DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAK-----ANQFLPADDFETTKKQSGEEF 103
Query: 964 ---------ARRRRSFGQGRRRVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVN 812
R+RR++ QGRRR+ R S AQ+ED I+RTVYVSDID VTEE LAG+F N
Sbjct: 104 DLDAKKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSN 163
Query: 811 CGQVVDCRVCGDTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNP 632
CGQVVDCR+CGD +S+LRFAFVEF +++GA ALS+ GT+LGFYP++VLPSKTAI PVNP
Sbjct: 164 CGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNP 223
Query: 631 TFLPRSEGEREMCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFV 455
TFLPRSE EREMC RT+YCTNIDK++SQ +++ FFE CGEV RLR LGD + TRIAFV
Sbjct: 224 TFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFV 283
Query: 454 EFAMADSAITALHCSGMVLGALPIRVSPSKTPVRPHLHRP 335
EFA+ADSA++AL+CSGMV+G+ PIRVSPSKTPVRP + RP
Sbjct: 284 EFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITRP 323
>TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interacting Domain
13); RNA binding / nucleic acid binding / nucleotide binding |
chr5:8345402-8347776 REVERSE
Length = 321
Score = 318 bits (813), Expect = 8e-087
Identities = 161/262 (61%), Positives = 202/262 (77%), Gaps = 5/262 (1%)
Frame = -2
Query: 1129 NLSDAFSKLNPMAKEFVPPSLARSQSGGVSRNGLGFTNGFTAAQPVVVADGNGQFARRRR 950
NL S LNPMAKEFVP LA++ N FTN F ++ GQFA RR
Sbjct: 58 NLKSEISHLNPMAKEFVPSFLAQTHHSEFWGNRFWFTNHFPKQTIFLI----GQFATMRR 113
Query: 949 SFGQGRRRVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVNCGQVVDCRVCGDTN 770
+FG+GR + K+T+L Q ED+IKRTVYVSDID+QVTEE LA +F++CGQVVDCR+CGD
Sbjct: 114 NFGKGRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYK 173
Query: 769 SILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGEREMCL 590
SILRFAF+EFT+ EGAR+AL SGT+ G +P++V SKTAIAPVNP+FLP+S+ E E C
Sbjct: 174 SILRFAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEKCG 233
Query: 589 RTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFVEFAMADSAITALHC 413
+TVYCTNIDK ++++EL+ FF+ +CGEV LR LGD+++ TRIAFVEF +A+SAI+AL+C
Sbjct: 234 KTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNC 293
Query: 412 SGMVLGALPIRVSPSKTPVRPH 347
SG+VLG LPIRVSPSKTPVR H
Sbjct: 294 SGVVLGELPIRVSPSKTPVRLH 315
>TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 315
Score = 301 bits (769), Expect = 1e-081
Identities = 160/272 (58%), Positives = 200/272 (73%), Gaps = 16/272 (5%)
Frame = -2
Query: 1138 EIKNLSDAFSKLNPMAKEFVPPSLARSQSGGVSRNGLGFTNGFTAAQPVVVADGNGQFA- 962
++K L F KLNP AKEF P RN + A +P + N + A
Sbjct: 49 QMKKLVAMFKKLNPEAKEFFP---------SYKRNTNQSDDFVIAIKP--SGEDNKKVAI 97
Query: 961 --RRRRSFGQGRR-RVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVNCGQVVDC 791
RRR ++ QGRR R+ R S AQ+ED I+RTVYVSDID VTEE LAG+F +CGQVVDC
Sbjct: 98 NRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDC 157
Query: 790 RVCGDTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSE 611
R+CGD NS+LRFAFVEF++++GAR+ALS+ GT++G+YP++VLPSKTAI PVNPTFLPRSE
Sbjct: 158 RICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSE 217
Query: 610 GEREMCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFVEFAMADS 434
EREMC RT+YCTN+DK ++ ++ FF+ CGEV RLR LGD + TRIAFVEFAMA+S
Sbjct: 218 DEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAES 277
Query: 433 AITALHCSGMVLGALPIRVSPSKTPVRPHLHR 338
A+ AL+CSG+VLG+ PIRVSPSKTPVR + R
Sbjct: 278 AVAALNCSGIVLGSQPIRVSPSKTPVRSRITR 309
Score = 67 bits (163), Expect = 2e-011
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = -2
Query: 913 TSLAQKED---VIKRTVYVSDIDHQVTEENLAGVFVN-CGQVVDCRVCGDTNSILRFAFV 746
T L + ED + RT+Y +++D TE+++ F + CG+V R+ GD R AFV
Sbjct: 211 TFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFV 270
Query: 745 EFTNEEGARAALSMSGTVLGFYPLKVLPSKTAI 647
EF E A AAL+ SG VLG P++V PSKT +
Sbjct: 271 EFAMAESAVAALNCSGIVLGSQPIRVSPSKTPV 303
>TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 309
Score = 290 bits (740), Expect = 2e-078
Identities = 141/210 (67%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
Frame = -2
Query: 961 RRRRSFGQGRR-RVNKRTSLAQKEDVIKRTVYVSDIDHQVTEENLAGVFVNCGQVVDCRV 785
+RR ++ QGRR R+ R S AQ+ED I+RTVYVSDID VTEE LAG+F +CGQVVDCR+
Sbjct: 94 KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 153
Query: 784 CGDTNSILRFAFVEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEGE 605
CGD NS+LRFAFVEF++++GAR+ALS+ GT++G+YP++VLPSKTAI PVNPTFLPRSE E
Sbjct: 154 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 213
Query: 604 REMCLRTVYCTNIDKRISQVELKGFFEMICGEVFRLR-LGDYHNHTRIAFVEFAMADSAI 428
REMC RT+YCTN+DK ++ ++ FF+ CGEV RLR LGD + TRIAFVEFAMA+SA+
Sbjct: 214 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 273
Query: 427 TALHCSGMVLGALPIRVSPSKTPVRPHLHR 338
AL+CSG+VLG+ PIRVSPSKTPVR + R
Sbjct: 274 AALNCSGIVLGSQPIRVSPSKTPVRSRITR 303
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,253,900,872
Number of Sequences: 33410
Number of Extensions: 7253900872
Number of Successful Extensions: 248611356
Number of sequences better than 0.0: 0
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