Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN13985


BLASTX 7.6.2

Query= UN13985 /QuerySize=937
        (936 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P81760|TL17_ARATH Thylakoid lumenal 17.4 kDa protein, chlorop...    385   3e-106
sp|P73709|Y1819_SYNY3 Uncharacterized protein slr1819 OS=Synecho...     52   7e-006

>sp|P81760|TL17_ARATH Thylakoid lumenal 17.4 kDa protein, chloroplastic
        OS=Arabidopsis thaliana GN=At5g53490 PE=1 SV=2

          Length = 236

 Score =  385 bits (987), Expect = 3e-106
 Identities = 200/239 (83%), Positives = 215/239 (89%), Gaps = 6/239 (2%)
 Frame = +3

Query:  30 MASLPVHFSRNHLSSPNFSGRFRRSTETRSFVALVHCSA---RENDQGIKKTLFPVKELG 200
           MASLPV F+RN +SSP FS   RR  E RS V  VHCSA   REN +G+KK+LFP+KELG
Sbjct:   1 MASLPVQFTRNQISSPFFSVNLRR--EPRSLVT-VHCSAGENRENGEGVKKSLFPLKELG 57

Query: 201 CFACAALSAFTLTMASPVIAANQRLPPLSTDPTRCEQAFVGNTIGQANGVYDKPLDLRFC 380
             ACAAL A TLT+ASPVIAANQRLPPLST+P RCE+AFVGNTIGQANGVYDKPLDLRFC
Sbjct:  58 SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 117

Query: 381 DYTNDQSNLKGKTLSAALMSGAKFDGADMSEVVMSKAYAVGASFKGVNFSNAVIDRVNFG 560
           DYTNDQ+NLKGKTLSAALM GAKFDGADM+EVVMSKAYAV ASFKGVNF+NAVIDRVNFG
Sbjct: 118 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 177

Query: 561 KSDLKGAVFKNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNVTINEEGRLVLGCR 737
           KS+LKGAVF+NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN +INEEGRLVLGCR
Sbjct: 178 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

>sp|P73709|Y1819_SYNY3 Uncharacterized protein slr1819 OS=Synechocystis sp.
        (strain PCC 6803) GN=slr1819 PE=4 SV=1

          Length = 331

 Score =  52 bits (122), Expect = 7e-006
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = +3

Query: 357 KPLDLRFCDYTNDQSNLKGKTLSAALMSGAKFDGADMSEVVMSKAYAVGASFKGVNFSNA 536
           + +DLR  D +   +NLKG  L+ A +SGAK +GAD+    + +A    A    VN   A
Sbjct: 184 RDVDLRKADLS--YANLKGALLTDANLSGAKLNGADLQNANLMRAKISEAEMTAVNCQGA 241

Query: 537 VIDRVNFGKSDLKGAVFKNTVLSGSTFEEANL 632
           ++  VN  +++L G+    T ++ +    ANL
Sbjct: 242 IMTHVNLNRTNLTGSNLSFTRMNSADLSRANL 273

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,771,599,260
Number of Sequences: 518415
Number of Extensions: 58771599260
Number of Successful Extensions: 389091298
Number of sequences better than 0.0: 0