BLASTX 7.6.2
Query= UN14049 /QuerySize=1605
(1604 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8VYR5|PP351_ARATH Pentatricopeptide repeat-containing protei... 792 3e-228
sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protei... 69 1e-010
sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat-containing protei... 67 3e-010
sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protei... 67 3e-010
sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containi... 65 1e-009
sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protei... 64 2e-009
sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protei... 64 4e-009
sp|Q8GYL7|PP361_ARATH Pentatricopeptide repeat-containing protei... 62 1e-008
sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protei... 62 1e-008
sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protei... 60 3e-008
sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protei... 60 3e-008
sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protei... 60 5e-008
sp|Q9LSF5|PP254_ARATH Pentatricopeptide repeat-containing protei... 59 7e-008
sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protei... 59 7e-008
sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protei... 59 9e-008
sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protei... 58 2e-007
sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containi... 57 3e-007
>sp|Q8VYR5|PP351_ARATH Pentatricopeptide repeat-containing protein At4g35850,
mitochondrial OS=Arabidopsis thaliana GN=At4g35850 PE=1 SV=1
Length = 444
Score = 792 bits (2043), Expect = 3e-228
Identities = 389/444 (87%), Positives = 424/444 (95%), Gaps = 3/444 (0%)
Frame = +3
Query: 81 LIQSIAGRNRSLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLL 260
L+QSI+GRNRSLVRALVSRR+FA SSPEE+AKRNYANDLSEYN+ VNSVTAQRRHYLL
Sbjct: 4 LMQSISGRNRSLVRALVSRRYFA---SSPEEIAKRNYANDLSEYNTAVNSVTAQRRHYLL 60
Query: 261 RDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLIST 440
RDVYDDMKLDGVQPTADIFHSFVVG MKGARLSDAFFFREEMK+MGI+PDVNLYNFLIST
Sbjct: 61 RDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLIST 120
Query: 441 CGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN 620
CGKCKNGKEAIRV++EMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN
Sbjct: 121 CGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN 180
Query: 621 QFCYAGLITAHLNKEPRPENLSTKILELVEQSKGWSSIDSSRKSAEDMMFNISEEELYNV 800
QFCYAGLITAHLNK+PRP+NLSTKILE VEQSKGWS+IDSSRKSAED+MF+ISEEELYN+
Sbjct: 181 QFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEELYNI 240
Query: 801 PTAEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQIMRC 980
PTA+YSHR+RFLQRNLTVYHVAFSALAD+KDV+ATEALLEMLKKDGK+TDTYC++QIMRC
Sbjct: 241 PTADYSHRTRFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCMLQIMRC 300
Query: 981 YLHSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEGAMTDYTEEGMKIAQETLVSMNDRNF 1160
YLHS+DF+NGLK F DYM++DK PAMELYTTLIEGAMT YT+ GMKIAQ+TL+ MN+RNF
Sbjct: 301 YLHSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQMNERNF 360
Query: 1161 FLDARTGSNLLLKAAGEKTGGYTVANMTWDLMQARNIPQTLASVEAYYKGLKEREIPEDD 1340
FLD RTGSNLLLKAAGEKTGGYTVANM WDLM ARNI TLA+VEAYYKGLKEREIPEDD
Sbjct: 361 FLDPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDD 420
Query: 1341 PRLMLVTRTFNTLKRQQGTFPNRR 1412
PRLMLVTRT+N L+ ++GT PNRR
Sbjct: 421 PRLMLVTRTYNNLRLREGTLPNRR 444
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 69 bits (166), Expect = 1e-010
Identities = 39/148 (26%), Positives = 75/148 (50%)
Frame = +3
Query: 201 LSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFRE 380
+ YNS+ + + R+ + + ++ M +GV+PT ++ + G RL A F E
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 381 EMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSG 560
+MK+ GISPD +N +I+ + K EA ++F EMK + P+ ++ ++
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 561 QLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
++D I +M ++G+ N Y+ L+
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLL 367
>sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat-containing protein At3g13150
OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1
Length = 551
Score = 67 bits (163), Expect = 3e-010
Identities = 42/153 (27%), Positives = 74/153 (48%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
++++AL + S EEL K + DL +N+++ + ++D MK
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
+ P ++S V G+ + + +DA + MK+ GISPDV+ YN LI+ N +E
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLD 569
++ + EMK + P+ T+ L+ G LD
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLD 350
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2
Length = 838
Score = 67 bits (163), Expect = 3e-010
Identities = 41/149 (27%), Positives = 72/149 (48%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFR 377
D+ Y+ +++ R ++ +D+M VQP +++ + + RLS A R
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
E+MK GISP+ Y LI +EA +FEEM+ ++PN + L++
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
GQ+ V ++R+M + V N+ Y +I
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMI 770
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein
At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 65 bits (158), Expect = 1e-009
Identities = 39/164 (23%), Positives = 76/164 (46%)
Frame = +3
Query: 114 LVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDG 293
LV L + + + + + Y D+ +N +++ + Q + ++ D M +G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 294 VQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAI 473
V P ++S + G+ K ++ D + M G +P++ +N L+ + + + EA+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 474 RVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAA 605
+ EEMK V P+ TF L++ +G LD Y + R M A
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 64 bits (155), Expect = 2e-009
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 5/296 (1%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
SL+ L S ++ +S ++ ++ +L +N+++++ + + +YDDM
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
+ P ++S V G RL A E M S PDV YN LI K K ++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITA 650
+F EM + + T+ L+ G D + + M + GV + Y+ L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 651 HLNKEPRPENLSTKILELVEQSKGWSSIDSSRKSAEDMMFNISEEELYNVPTAEYSHRSR 830
N + L ++ + +++S+ I E M ++ +++ S +
Sbjct: 480 LCNNGKLEKAL--EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL---FCSLSLK 534
Query: 831 FLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQIMRCYLHSKD 998
++ N+ Y+ S L + +Q ALL+ +K+DG ++ ++R +L D
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 64 bits (153), Expect = 4e-009
Identities = 39/130 (30%), Positives = 62/130 (47%)
Frame = +3
Query: 258 LRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLIS 437
+ + + MK DG+ P A +++ + +G+ +A EEMK+ G S D YN L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 438 TCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGL 617
GK KEA++V EM P+ T+ L++A A G LD + M G
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 618 NQFCYAGLIT 647
+ F Y L++
Sbjct: 383 DVFTYTTLLS 392
Score = 58 bits (139), Expect = 2e-007
Identities = 35/148 (23%), Positives = 65/148 (43%)
Frame = +3
Query: 168 EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKG 347
EE+ ++ D YN++++ R V ++M L+G P+ ++S + +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 348 ARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTF 527
L +A + +M G PDV Y L+S + + A+ +FEEM+ KPN TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 528 VCLLNACAVSGQLDLVYAIVRDMTAAGV 611
+ G+ + I ++ G+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGL 450
>sp|Q8GYL7|PP361_ARATH Pentatricopeptide repeat-containing protein At5g02830,
chloroplastic OS=Arabidopsis thaliana GN=At5g02830 PE=2 SV=2
Length = 852
Score = 62 bits (149), Expect = 1e-008
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDD---MKLDGVQPTADIFHSFVVGVMKGARL-SDA 365
D++ YN ++ + R L +D+Y + M+ G+ + ++ V A++ A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 366 FFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNA 545
+++MKS+G++P+ + ++ LIS C ++A +FEEM +PN Q F LL+A
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 546 CAVSGQLDLVYAIVRDMTAAGVGLNQFCYA 635
C + Q D + + + G +N+ YA
Sbjct: 454 CVEACQYDRAFRLFQSW--KGSSVNESLYA 481
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1
Length = 816
Score = 62 bits (148), Expect = 1e-008
Identities = 41/165 (24%), Positives = 72/165 (43%)
Frame = +3
Query: 168 EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKG 347
+E+ R L YN++++ V + MK D ++P+ F++ + G+ K
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 348 ARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTF 527
+ DA +EMK +G PD ++ L + + A+ V+E VK N T
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 528 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNK 662
LLNA G+++ I+ A G+ N+ Y +I + K
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 60 bits (145), Expect = 3e-008
Identities = 38/157 (24%), Positives = 67/157 (42%)
Frame = +3
Query: 174 LAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGAR 353
+ ++ Y+ + YNS+++ + Y +M +G P F S + G K R
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 354 LSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVC 533
+ A EMKSM + D+ Y LI K + K A +F E+ + PN +
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 534 LLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
L++ G++D + + M G+ + F Y +I
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 60 bits (145), Expect = 3e-008
Identities = 63/333 (18%), Positives = 126/333 (37%), Gaps = 10/333 (3%)
Frame = +3
Query: 102 RNRSLVRALVSRRFFASSSSSP-----EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRD 266
R S+V + + FF +++ +N + DL N+ ++ + R
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 267 VYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCG 446
+++++K P A + + G++K ++ + MK G D YN +I
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 447 KCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQF 626
KC +A ++ EEMK +P T+ +++ A +LD Y + + + + LN
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 627 CYAGLITAHLNKEPRPENLSTKILELVEQSKGWSSIDSSRKSAEDMMFNISEEELYNVPT 806
Y+ LI K R + + EL++ KG + + S D + + EE+
Sbjct: 659 IYSSLIDG-FGKVGRIDEAYLILEELMQ--KGLTPNLYTWNSLLDAL--VKAEEINEALV 713
Query: 807 AEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQIMRCYL 986
S + N Y + + L ++ + ++K G T ++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 987 HSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEG 1085
+ + F + + P Y +IEG
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Score = 60 bits (145), Expect = 3e-008
Identities = 32/132 (24%), Positives = 63/132 (47%)
Frame = +3
Query: 174 LAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGAR 353
+ K + S Y +++ + +A ++ ++ M+ G +PT +F + + G K R
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 354 LSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVC 533
+ A +EMKS + D+ LYN I + GK A + F E++ +KP+ T+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 534 LLNACAVSGQLD 569
++ + +LD
Sbjct: 279 MIGVLCKANRLD 290
Score = 59 bits (141), Expect = 9e-008
Identities = 65/308 (21%), Positives = 116/308 (37%), Gaps = 7/308 (2%)
Frame = +3
Query: 210 YNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMK 389
YN ++ + + V+++MK D P ++ + + + +L AF R+ M+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 390 SMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLD 569
G+ P+V N ++ K + EA +FEEM P+ TF L++ G++D
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 570 LVYAIVRDMTAAGVGLNQFCYAGLITAHLNKEPRPENLSTKILELVEQSKGWSSIDSSRK 749
Y + M + N Y LI N R E+ +++ Q+ S
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFN-HGRKEDGHKIYKDMINQN--CSPDLQLLN 521
Query: 750 SAEDMMFNISEEELYNVPTAEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLK 929
+ D MF E E E R RF+ + Y + L T L +K
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKAR-RFVP-DARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 930 KDGKNTDTYCVIQIMRCYLHSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEG-AMTDYTE 1106
+ G DT ++ + + + P + Y ++I+G A D +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 1107 EGMKIAQE 1130
E + +E
Sbjct: 640 EAYMLFEE 647
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1
Length = 709
Score = 60 bits (143), Expect = 5e-008
Identities = 38/151 (25%), Positives = 67/151 (44%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
+L++ V + S E+ KR + D Y+ ++++ R R V +M+
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
VQP + +F + G F +EMKS+G+ PD YN +I T GK A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQ 563
+ F+ M ++P+ T+ L++ G+
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
>sp|Q9LSF5|PP254_ARATH Pentatricopeptide repeat-containing protein At3g25210,
mitochondrial OS=Arabidopsis thaliana GN=At3g25210 PE=2 SV=1
Length = 379
Score = 59 bits (142), Expect = 7e-008
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +3
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
++MKS G+ PD + N +I KC EAIRVF+EM Y +PN T+ L+
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKEPRPENLSTKILELVEQS 716
G++ ++M G+ N CY LI + L+ E R + + +++ S
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICS-LSMERRLDEAVEVVYDMLANS 323
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 59 bits (142), Expect = 7e-008
Identities = 35/155 (22%), Positives = 72/155 (46%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFR 377
D+ Y +++ + R V +M + + +++ + G + + +A
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
++MK G+ PD++ Y IS C K + A + EEM+ VKPN +T+ L+ A +
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNK 662
+ + +M A G+ ++ Y L+T+ L++
Sbjct: 813 SLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1
Length = 918
Score = 59 bits (141), Expect = 9e-008
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +3
Query: 180 KRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLS 359
KR N +S Y++V++ R +++ +M+ G+ +++ + K R
Sbjct: 403 KRIMPNVVS-YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 360 DAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLL 539
+A EM S+GI DV YN L+ GK E +VF EMKR V PN T+ L+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 540 NACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITA 650
+ + G I R+ +AG+ + Y+ LI A
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 58 bits (138), Expect = 2e-007
Identities = 38/157 (24%), Positives = 72/157 (45%)
Frame = +3
Query: 174 LAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGAR 353
+ + Y D+ YNSV++ + +V D M P +++ + + K +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 354 LSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVC 533
+ +A + S GI PDV +N LI +N + A+ +FEEM+ +P+ T+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 534 LLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
L+++ G+LD +++ M +G + Y LI
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein
At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 57 bits (137), Expect = 3e-007
Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 17/295 (5%)
Frame = +3
Query: 270 YDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGK 449
+ DM G +PT ++ + + K + A EEMK G+ PD YN +I GK
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 450 CKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFC 629
+ + FEEMK +P+ T+ L+N G+L + R+M G+ N
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 630 YAGLITAHLNKEPRPENLSTKI----LELVEQSKGWSS-IDSSRKSAE-DMMFNISEEEL 791
Y+ L+ A + + + + + LV ++S ID++ K F + E L
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 792 YNVPTAEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQI 971
++ N+ Y L D + ++ E L + G + +
Sbjct: 430 -----------QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 972 MRCYLHSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEGAMTDYTEEGMKIAQETL 1136
+ ++ +K+ L+ + P + LY T I G + E K+ +
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,771,599,260
Number of Sequences: 518415
Number of Extensions: 58771599260
Number of Successful Extensions: 389091298
Number of sequences better than 0.0: 0
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