BLASTX 7.6.2
Query= UN14049 /QuerySize=1605
(1604 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G35850.1 | Symbols: | pentatricopeptide (PPR)... 792 2e-229
TAIR9_protein||AT1G63230.1 | Symbols: | pentatricopeptide (PPR)... 74 3e-013
TAIR9_protein||AT2G37230.1 | Symbols: | pentatricopeptide (PPR)... 69 1e-011
TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)... 67 2e-011
TAIR9_protein||AT4G19440.1 | Symbols: | pentatricopeptide (PPR)... 67 2e-011
TAIR9_protein||AT1G63630.1 | Symbols: | pentatricopeptide (PPR)... 66 6e-011
TAIR9_protein||AT1G74580.1 | Symbols: | pentatricopeptide (PPR)... 65 8e-011
TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)... 64 2e-010
TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)... 64 3e-010
TAIR9_protein||AT5G02830.1 | Symbols: | pentatricopeptide (PPR)... 62 9e-010
TAIR9_protein||AT5G12100.1 | Symbols: | pentatricopeptide (PPR)... 62 1e-009
TAIR9_protein||AT2G39230.1 | Symbols: | pentatricopeptide (PPR)... 60 3e-009
TAIR9_protein||AT3G06920.1 | Symbols: | pentatricopeptide (PPR)... 60 3e-009
TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)... 60 5e-009
TAIR9_protein||AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular... 59 6e-009
TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)... 59 6e-009
TAIR9_protein||AT2G31400.1 | Symbols: | pentatricopeptide (PPR)... 59 8e-009
TAIR9_protein||AT2G02150.1 | Symbols: | pentatricopeptide (PPR)... 57 2e-008
>TAIR9_protein||AT4G35850.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:16983638-16986681 FORWARD
Length = 445
Score = 792 bits (2044), Expect = 2e-229
Identities = 389/445 (87%), Positives = 424/445 (95%), Gaps = 3/445 (0%)
Frame = +3
Query: 81 LIQSIAGRNRSLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLL 260
L+QSI+GRNRSLVRALVSRR+FA SSPEE+AKRNYANDLSEYN+ VNSVTAQRRHYLL
Sbjct: 4 LMQSISGRNRSLVRALVSRRYFA---SSPEEIAKRNYANDLSEYNTAVNSVTAQRRHYLL 60
Query: 261 RDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLIST 440
RDVYDDMKLDGVQPTADIFHSFVVG MKGARLSDAFFFREEMK+MGI+PDVNLYNFLIST
Sbjct: 61 RDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLIST 120
Query: 441 CGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN 620
CGKCKNGKEAIRV++EMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN
Sbjct: 121 CGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLN 180
Query: 621 QFCYAGLITAHLNKEPRPENLSTKILELVEQSKGWSSIDSSRKSAEDMMFNISEEELYNV 800
QFCYAGLITAHLNK+PRP+NLSTKILE VEQSKGWS+IDSSRKSAED+MF+ISEEELYN+
Sbjct: 181 QFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEELYNI 240
Query: 801 PTAEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQIMRC 980
PTA+YSHR+RFLQRNLTVYHVAFSALAD+KDV+ATEALLEMLKKDGK+TDTYC++QIMRC
Sbjct: 241 PTADYSHRTRFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCMLQIMRC 300
Query: 981 YLHSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEGAMTDYTEEGMKIAQETLVSMNDRNF 1160
YLHS+DF+NGLK F DYM++DK PAMELYTTLIEGAMT YT+ GMKIAQ+TL+ MN+RNF
Sbjct: 301 YLHSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQMNERNF 360
Query: 1161 FLDARTGSNLLLKAAGEKTGGYTVANMTWDLMQARNIPQTLASVEAYYKGLKEREIPEDD 1340
FLD RTGSNLLLKAAGEKTGGYTVANM WDLM ARNI TLA+VEAYYKGLKEREIPEDD
Sbjct: 361 FLDPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDD 420
Query: 1341 PRLMLVTRTFNTLKRQQGTFPNRR* 1415
PRLMLVTRT+N L+ ++GT PNRR*
Sbjct: 421 PRLMLVTRTYNNLRLREGTLPNRR* 445
>TAIR9_protein||AT1G63230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23451144-23452201 FORWARD
Length = 324
Score = 74 bits (179), Expect = 3e-013
Identities = 46/184 (25%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Frame = +3
Query: 171 ELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGA 350
++ +R D+ +++++N++ + + ++Y DM G+ PT ++S + G K
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 351 RLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFV 530
RL+DA + M S SPDV ++ LI+ K K + +F EM R + N T+
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 531 CLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKEPRPENLSTKILELVE 710
L++ G LD ++ M ++GV N + ++ + +K+ + + ILE ++
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA--ILEDLQ 313
Query: 711 QSKG 722
+S+G
Sbjct: 314 KSEG 317
>TAIR9_protein||AT2G37230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:15637177-15639450 REVERSE
Length = 758
Score = 69 bits (166), Expect = 1e-011
Identities = 39/148 (26%), Positives = 75/148 (50%)
Frame = +3
Query: 201 LSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFRE 380
+ YNS+ + + R+ + + ++ M +GV+PT ++ + G RL A F E
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 381 EMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSG 560
+MK+ GISPD +N +I+ + K EA ++F EMK + P+ ++ ++
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 561 QLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
++D I +M ++G+ N Y+ L+
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLL 367
>TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:4227975-4229630 REVERSE
Length = 552
Score = 67 bits (163), Expect = 2e-011
Identities = 42/153 (27%), Positives = 74/153 (48%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
++++AL + S EEL K + DL +N+++ + ++D MK
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
+ P ++S V G+ + + +DA + MK+ GISPDV+ YN LI+ N +E
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLD 569
++ + EMK + P+ T+ L+ G LD
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLD 350
>TAIR9_protein||AT4G19440.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10602006-10604483 REVERSE
Length = 826
Score = 67 bits (163), Expect = 2e-011
Identities = 41/149 (27%), Positives = 72/149 (48%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFR 377
D+ Y+ +++ R ++ +D+M VQP +++ + + RLS A R
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
E+MK GISP+ Y LI +EA +FEEM+ ++PN + L++
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
GQ+ V ++R+M + V N+ Y +I
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMI 757
>TAIR9_protein||AT1G63630.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23587298-23588220 FORWARD
Length = 258
Score = 66 bits (159), Expect = 6e-011
Identities = 38/156 (24%), Positives = 75/156 (48%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFR 377
D+ +++++N+ +R+ ++Y +M + PT ++S + G K R+ DA
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
+ M S G SPDV ++ LI+ K K + +F EM R + N T+ L++
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKE 665
G LD ++ +M + GV + + ++ +K+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
>TAIR9_protein||AT1G74580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:28020777-28023068 FORWARD
Length = 764
Score = 65 bits (158), Expect = 8e-011
Identities = 39/164 (23%), Positives = 76/164 (46%)
Frame = +3
Query: 114 LVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDG 293
LV L + + + + + Y D+ +N +++ + Q + ++ D M +G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 294 VQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAI 473
V P ++S + G+ K ++ D + M G +P++ +N L+ + + + EA+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 474 RVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAA 605
+ EEMK V P+ TF L++ +G LD Y + R M A
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
>TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23177294-23179198 REVERSE
Length = 635
Score = 64 bits (155), Expect = 2e-010
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 5/296 (1%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
SL+ L S ++ +S ++ ++ +L +N+++++ + + +YDDM
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
+ P ++S V G RL A E M S PDV YN LI K K ++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITA 650
+F EM + + T+ L+ G D + + M + GV + Y+ L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 651 HLNKEPRPENLSTKILELVEQSKGWSSIDSSRKSAEDMMFNISEEELYNVPTAEYSHRSR 830
N + L ++ + +++S+ I E M ++ +++ S +
Sbjct: 480 LCNNGKLEKAL--EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL---FCSLSLK 534
Query: 831 FLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQIMRCYLHSKD 998
++ N+ Y+ S L + +Q ALL+ +K+DG ++ ++R +L D
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
>TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:654102-656561 FORWARD
Length = 820
Score = 64 bits (153), Expect = 3e-010
Identities = 39/130 (30%), Positives = 62/130 (47%)
Frame = +3
Query: 258 LRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLIS 437
+ + + MK DG+ P A +++ + +G+ +A EEMK+ G S D YN L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 438 TCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGL 617
GK KEA++V EM P+ T+ L++A A G LD + M G
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 618 NQFCYAGLIT 647
+ F Y L++
Sbjct: 383 DVFTYTTLLS 392
Score = 58 bits (139), Expect = 1e-008
Identities = 35/148 (23%), Positives = 65/148 (43%)
Frame = +3
Query: 168 EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKG 347
EE+ ++ D YN++++ R V ++M L+G P+ ++S + +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 348 ARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTF 527
L +A + +M G PDV Y L+S + + A+ +FEEM+ KPN TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 528 VCLLNACAVSGQLDLVYAIVRDMTAAGV 611
+ G+ + I ++ G+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGL 450
>TAIR9_protein||AT5G02830.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:644458-648421 REVERSE
Length = 853
Score = 62 bits (149), Expect = 9e-010
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDD---MKLDGVQPTADIFHSFVVGVMKGARL-SDA 365
D++ YN ++ + R L +D+Y + M+ G+ + ++ V A++ A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 366 FFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNA 545
+++MKS+G++P+ + ++ LIS C ++A +FEEM +PN Q F LL+A
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 546 CAVSGQLDLVYAIVRDMTAAGVGLNQFCYA 635
C + Q D + + + G +N+ YA
Sbjct: 454 CVEACQYDRAFRLFQSW--KGSSVNESLYA 481
>TAIR9_protein||AT5G12100.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:3911388-3913838 FORWARD
Length = 817
Score = 62 bits (148), Expect = 1e-009
Identities = 41/165 (24%), Positives = 72/165 (43%)
Frame = +3
Query: 168 EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKG 347
+E+ R L YN++++ V + MK D ++P+ F++ + G+ K
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 348 ARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTF 527
+ DA +EMK +G PD ++ L + + A+ V+E VK N T
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 528 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNK 662
LLNA G+++ I+ A G+ N+ Y +I + K
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
>TAIR9_protein||AT2G39230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:16381647-16384250 FORWARD
Length = 868
Score = 60 bits (145), Expect = 3e-009
Identities = 38/157 (24%), Positives = 67/157 (42%)
Frame = +3
Query: 174 LAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGAR 353
+ ++ Y+ + YNS+++ + Y +M +G P F S + G K R
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 354 LSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVC 533
+ A EMKSM + D+ Y LI K + K A +F E+ + PN +
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 534 LLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLI 644
L++ G++D + + M G+ + F Y +I
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
>TAIR9_protein||AT3G06920.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:2181717-2184449 FORWARD
Length = 872
Score = 60 bits (145), Expect = 3e-009
Identities = 32/132 (24%), Positives = 63/132 (47%)
Frame = +3
Query: 174 LAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGAR 353
+ K + S Y +++ + +A ++ ++ M+ G +PT +F + + G K R
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 354 LSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVC 533
+ A +EMKS + D+ LYN I + GK A + F E++ +KP+ T+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 534 LLNACAVSGQLD 569
++ + +LD
Sbjct: 279 MIGVLCKANRLD 290
Score = 58 bits (139), Expect = 1e-008
Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 7/265 (2%)
Frame = +3
Query: 168 EELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKG 347
EE+ R + D Y+ +++ + +++ MK G ++ + G K
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 348 ARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTF 527
+++ A+ EEMK+ G P V Y +I K EA +FEE K ++ N +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 528 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKEPRPENLSTKILELV 707
L++ G++D Y I+ ++ G+ N + + L+ A + E E L +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL------VC 714
Query: 708 EQSKGWSSIDSSRKSAEDMMFNISEEELYNVPTAEYSHRSRFLQRNLTV-YHVAFSALAD 884
QS ++ + ++ + + +N + + + T+ Y S LA
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 885 IKDVQATEALLEMLKKDGKNTDTYC 959
++ AL + K +G D+ C
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSAC 799
>TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:16915860-16918238 FORWARD
Length = 710
Score = 60 bits (143), Expect = 5e-009
Identities = 38/151 (25%), Positives = 67/151 (44%)
Frame = +3
Query: 111 SLVRALVSRRFFASSSSSPEELAKRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLD 290
+L++ V + S E+ KR + D Y+ ++++ R R V +M+
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 291 GVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEA 470
VQP + +F + G F +EMKS+G+ PD YN +I T GK A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 471 IRVFEEMKRYDVKPNGQTFVCLLNACAVSGQ 563
+ F+ M ++P+ T+ L++ G+
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
>TAIR9_protein||AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6; Metazoa - 114; Fungi
- 126; Plants - 12736; Viruses - 0; Other Eukaryotes - 363 (source:
NCBI BLink). | chr3:9180348-9181487 FORWARD
Length = 380
Score = 59 bits (142), Expect = 6e-009
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +3
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
++MKS G+ PD + N +I KC EAIRVF+EM Y +PN T+ L+
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKEPRPENLSTKILELVEQS 716
G++ ++M G+ N CY LI + L+ E R + + +++ S
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICS-LSMERRLDEAVEVVYDMLANS 323
>TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:1390049-1393760 FORWARD
Length = 953
Score = 59 bits (142), Expect = 6e-009
Identities = 35/155 (22%), Positives = 72/155 (46%)
Frame = +3
Query: 198 DLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFR 377
D+ Y +++ + R V +M + + +++ + G + + +A
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 378 EEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVS 557
++MK G+ PD++ Y IS C K + A + EEM+ VKPN +T+ L+ A +
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 558 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNK 662
+ + +M A G+ ++ Y L+T+ L++
Sbjct: 813 SLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
>TAIR9_protein||AT2G31400.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:13387201-13390550 REVERSE
Length = 919
Score = 59 bits (141), Expect = 8e-009
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +3
Query: 180 KRNYANDLSEYNSVVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGVMKGARLS 359
KR N +S Y++V++ R +++ +M+ G+ +++ + K R
Sbjct: 403 KRIMPNVVS-YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 360 DAFFFREEMKSMGISPDVNLYNFLISTCGKCKNGKEAIRVFEEMKRYDVKPNGQTFVCLL 539
+A EM S+GI DV YN L+ GK E +VF EMKR V PN T+ L+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 540 NACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITA 650
+ + G I R+ +AG+ + Y+ LI A
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
>TAIR9_protein||AT2G02150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:547389-552229 REVERSE
Length = 1142
Score = 57 bits (137), Expect = 2e-008
Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 17/295 (5%)
Frame = +3
Query: 270 YDDMKLDGVQPTADIFHSFVVGVMKGARLSDAFFFREEMKSMGISPDVNLYNFLISTCGK 449
+ DM G +PT ++ + + K + A EEMK G+ PD YN +I GK
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 450 CKNGKEAIRVFEEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFC 629
+ + FEEMK +P+ T+ L+N G+L + R+M G+ N
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 630 YAGLITAHLNKEPRPENLSTKI----LELVEQSKGWSS-IDSSRKSAE-DMMFNISEEEL 791
Y+ L+ A + + + + + LV ++S ID++ K F + E L
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297
Query: 792 YNVPTAEYSHRSRFLQRNLTVYHVAFSALADIKDVQATEALLEMLKKDGKNTDTYCVIQI 971
++ N+ Y L D + ++ E L + G + +
Sbjct: 298 -----------QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346
Query: 972 MRCYLHSKDFKNGLKWFGDYMNSDKTPAMELYTTLIEGAMTDYTEEGMKIAQETL 1136
+ ++ +K+ L+ + P + LY T I G + E K+ +
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,338,858,454
Number of Sequences: 33410
Number of Extensions: 7338858454
Number of Successful Extensions: 248633092
Number of sequences better than 0.0: 0
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