BLASTX 7.6.2
Query= UN14115 /QuerySize=639
(638 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G56340.1 | Symbols: | 40S ribosomal protein S... 266 9e-072
TAIR9_protein||AT2G40590.1 | Symbols: | 40S ribosomal protein S... 263 8e-071
TAIR9_protein||AT2G40510.1 | Symbols: | 40S ribosomal protein S... 260 6e-070
>TAIR9_protein||AT3G56340.1 | Symbols: | 40S ribosomal protein S26 (RPS26C) |
chr3:20892309-20893343 REVERSE
Length = 131
Score = 266 bits (679), Expect = 9e-072
Identities = 124/131 (94%), Positives = 125/131 (95%)
Frame = +3
Query: 66 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 245
MTFKRRNGGRNKHNRGHV PIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 246 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFVRRKEDAPKPGQPGQAPRP 425
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRF RRKED PKP QPGQAPRP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPAQPGQAPRP 120
Query: 426 AGGAPAAPRT* 458
AGGAPAAPR *
Sbjct: 121 AGGAPAAPRA* 131
>TAIR9_protein||AT2G40590.1 | Symbols: | 40S ribosomal protein S26 (RPS26B) |
chr2:16945215-16946345 REVERSE
Length = 132
Score = 263 bits (671), Expect = 8e-071
Identities = 125/132 (94%), Positives = 126/132 (95%), Gaps = 1/132 (0%)
Frame = +3
Query: 66 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 245
MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 246 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFVRRKEDAPKPGQPGQAPRP 425
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRF RRKED PKPGQPGQAPRP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPGQAPRP 120
Query: 426 AG-GAPAAPRT* 458
AG GA AAPR *
Sbjct: 121 AGPGAAAAPRV* 132
>TAIR9_protein||AT2G40510.1 | Symbols: | 40S ribosomal protein S26 (RPS26A) |
chr2:16918506-16919623 FORWARD
Length = 134
Score = 260 bits (663), Expect = 6e-070
Identities = 124/134 (92%), Positives = 125/134 (93%), Gaps = 3/134 (2%)
Frame = +3
Query: 66 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 245
MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 246 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFVRRKEDAPKPGQPGQAPRP 425
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRF RRKED PKPGQPGQAPRP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQAPRP 120
Query: 426 AG---GAPAAPRT* 458
AG A AAPR *
Sbjct: 121 AGPGAAAAAAPRV* 134
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,430,683,274
Number of Sequences: 33410
Number of Extensions: 7430683274
Number of Successful Extensions: 253939996
Number of sequences better than 0.0: 0
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