BLASTX 7.6.2
Query= UN14173 /QuerySize=1832
(1831 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G42470.1 | Symbols: | patched family protein ... 824 5e-239
TAIR9_protein||AT4G38350.1 | Symbols: | hedgehog receptor | chr... 783 1e-226
>TAIR9_protein||AT1G42470.1 | Symbols: | patched family protein |
chr1:15926987-15935128 FORWARD
Length = 1273
Score = 824 bits (2127), Expect = 5e-239
Identities = 404/440 (91%), Positives = 418/440 (95%)
Frame = +2
Query: 53 IKMPAVRVFSLFAALAVLLDFILQITAFVALIVFDFRRTEDKRVDCFPCIKRPQSSDGDN 232
IKMPAVRVFS+FAALAVLLDF+LQITAFVALIVFDFRRTEDKRVDCFPCIK +SS
Sbjct: 726 IKMPAVRVFSMFAALAVLLDFLLQITAFVALIVFDFRRTEDKRVDCFPCIKTSKSSISAE 785
Query: 233 KGVGQKKPGPLTRYMKEVHAPILSHWAVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVL 412
KGVGQ+K G LTRYMKEVHAP+LSHW VKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVL
Sbjct: 786 KGVGQRKAGLLTRYMKEVHAPVLSHWIVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVL 845
Query: 413 PQDSYLHDYFNNIETYLRIGPPLYFVLKNYNYSSESSQTNQLCSINKCDSNSLMNEIAKA 592
PQDSYL YFNNI TYLRIGPPLYFVLKNYNYSSES TNQLCSINKC+ NSL+NEIA+A
Sbjct: 846 PQDSYLQGYFNNISTYLRIGPPLYFVLKNYNYSSESRHTNQLCSINKCNPNSLLNEIARA 905
Query: 593 SLTPELSYIAKPAASWVDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPADQGSCGLS 772
SLTPELSYIAKPAASW+DDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCP Q SCGLS
Sbjct: 906 SLTPELSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPPGQTSCGLS 965
Query: 773 EVCKDCTTCFRHADLSSDRPSTVQFREKLPWFLSALPSADCAKGGHGAYSTSVDLQGYKN 952
EVCKDCTTCFRHADLSSDRPST QF+EKLPWFL+ALPSADCAKGGHGAYS+SVDLQGY N
Sbjct: 966 EVCKDCTTCFRHADLSSDRPSTTQFKEKLPWFLNALPSADCAKGGHGAYSSSVDLQGYAN 1025
Query: 953 GIIQASSFRTYHTPLNKQADFVNSMRAAQEFSSKVSRSLKMEIYPYSVFYMFFEQYLDIW 1132
GIIQASSFRTYHTPLNKQ DFVNSMRAAQEFS+KVSRSLKMEIYPYSVFYMFFEQYLDIW
Sbjct: 1026 GIIQASSFRTYHTPLNKQVDFVNSMRAAQEFSAKVSRSLKMEIYPYSVFYMFFEQYLDIW 1085
Query: 1133 KTALINLSIAIAAVFAVCLIITCSFWSSAIILLVIAMLIIDLLGVMAVFHIQLNALSVVN 1312
KTALINLSIAIAAVF VCLIITCSFWSSAIILLVIAM+IIDLLGVMAVFHIQLNALSVVN
Sbjct: 1086 KTALINLSIAIAAVFVVCLIITCSFWSSAIILLVIAMIIIDLLGVMAVFHIQLNALSVVN 1145
Query: 1313 LIMSVGIAVEFCVHITHAFS 1372
LIMSVGIAVEFCVHITHAFS
Sbjct: 1146 LIMSVGIAVEFCVHITHAFS 1165
Score = 156 bits (392), Expect = 7e-038
Identities = 75/106 (70%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Frame = +1
Query: 1348 CTHNTCFLDKLWEQEPKDERGAWWDGSFSFQWNYIDKASWSDCAWLLKIGSVCGLLLQDV 1527
C H T W Q+P DERG WDGSFSFQWNYID+ SW DCA LKI S+CG+LLQDV
Sbjct: 1157 CVHITHAFSH-WGQKPSDERGVGWDGSFSFQWNYIDETSWGDCARFLKIRSLCGVLLQDV 1215
Query: 1528 FGTSPPRFLARPCILTGVLEHVWPSSKTCSRG**ARSSTFGFIAAV 1665
FGTSP RFL RPCI TGVLEHVW SSKTC RG ARSSTFGFI+ +
Sbjct: 1216 FGTSPSRFLTRPCIFTGVLEHVWSSSKTCRRG-KARSSTFGFISTL 1260
>TAIR9_protein||AT4G38350.1 | Symbols: | hedgehog receptor |
chr4:17958324-17966417 REVERSE
Length = 1235
Score = 783 bits (2020), Expect = 1e-226
Identities = 371/536 (69%), Positives = 454/536 (84%), Gaps = 2/536 (0%)
Frame = +2
Query: 53 IKMPAVRVFSLFAALAVLLDFILQITAFVALIVFDFRRTEDKRVDCFPCIKRPQSSDGDN 232
+ MPA R+FS+FAALA++LDF LQITAFVALIVFD +R+ D R+DCFPCIK P SS
Sbjct: 700 VPMPACRIFSMFAALAIMLDFFLQITAFVALIVFDCKRSADNRIDCFPCIKVPSSSRESV 759
Query: 233 KGVGQKKPGPLTRYMKEVHAPILSHWAVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVL 412
+ G ++PG L RYMKEVHAP+L W VK+VV+A FF A+A IA+S R+E GLEQ+IVL
Sbjct: 760 E--GGREPGFLERYMKEVHAPVLGLWGVKMVVVAVFFAFALASIAISPRLETGLEQKIVL 817
Query: 413 PQDSYLHDYFNNIETYLRIGPPLYFVLKNYNYSSESSQTNQLCSINKCDSNSLMNEIAKA 592
P+DSYL DYF+++ YLR+GPPLYFV+KNYNYSSES TNQLCSI++C+SNSL+NEI++A
Sbjct: 818 PRDSYLQDYFDSLSEYLRVGPPLYFVVKNYNYSSESRHTNQLCSISQCNSNSLLNEISRA 877
Query: 593 SLTPELSYIAKPAASWVDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPADQGSCGLS 772
S + SYIAKPAASW+DDFLVWLSPEAFGCCRKFTNG++CPPDDQPPCC A++ C L
Sbjct: 878 SQASDTSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCTAEEDICSLD 937
Query: 773 EVCKDCTTCFRHADLSSDRPSTVQFREKLPWFLSALPSADCAKGGHGAYSTSVDLQGYKN 952
+CKDCTTCFRH+DL DRPST QFREKLPWFL+ALPSADCAKGGHGAY+ SVDL+GY++
Sbjct: 938 GICKDCTTCFRHSDLVQDRPSTAQFREKLPWFLNALPSADCAKGGHGAYTNSVDLKGYES 997
Query: 953 GIIQASSFRTYHTPLNKQADFVNSMRAAQEFSSKVSRSLKMEIYPYSVFYMFFEQYLDIW 1132
G+IQAS FRTYHTPLN Q D+VN++RAA+EFSS++S SLK++I+PYSVFY+FFEQYL+IW
Sbjct: 998 GVIQASEFRTYHTPLNTQGDYVNALRAAREFSSRISNSLKIDIFPYSVFYIFFEQYLNIW 1057
Query: 1133 KTALINLSIAIAAVFAVCLIITCSFWSSAIILLVIAMLIIDLLGVMAVFHIQLNALSVVN 1312
AL NL+IAI A+F VC +IT S WSSAII+LV+ M+++DL+G+M + IQLNA+SVVN
Sbjct: 1058 TVALTNLAIAIGAIFIVCWLITSSAWSSAIIVLVLVMILVDLMGMMVILGIQLNAVSVVN 1117
Query: 1313 LIMSVGIAVEFCVHITHAFSTSSGNRNQRMKEALGGMGASVFSGITLTKLVGVIVLGFSK 1492
LIMS+GIAVEFCVHI+HAF SSG+R R +EAL MGASVFSGITLTKLVGVIVL F++
Sbjct: 1118 LIMSIGIAVEFCVHISHAFLMSSGDREHRAREALETMGASVFSGITLTKLVGVIVLCFAR 1177
Query: 1493 SEVFVVYYFKMYLALVLLGFLHGLVFLPVFLSMFGPAPRHVAGDNKQDPQPSVSSL 1660
SE+FVVYYF+MYLALV++GFLHGLVFLPV LS+ GP ++ + +Q + S S L
Sbjct: 1178 SEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLAGPPQLNLDIEQQQTDEASSSLL 1233
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,473,873,593
Number of Sequences: 33410
Number of Extensions: 7473873593
Number of Successful Extensions: 254010249
Number of sequences better than 0.0: 0
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