BLASTX 7.6.2
Query= UN14201 /QuerySize=749
(748 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2... 183 1e-046
TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2... 181 6e-046
TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 71 7e-013
TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 71 7e-013
TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 71 7e-013
TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 71 7e-013
>TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 144
Score = 183 bits (463), Expect = 1e-046
Identities = 96/144 (66%), Positives = 110/144 (76%), Gaps = 9/144 (6%)
Frame = +2
Query: 80 MSTVVDRSVSTLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSEYE---- 247
M+ +DR +STLNPNAPVFDPV FREVEDFSPKWW+LVTTSKWFRDFWLSANSE E
Sbjct: 1 MTATIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGG 60
Query: 248 --FSDMEDEFEELTMTEAEMGGSTVTGNESDVGRYLKVLLSMAESRKGKLYRSNV-SYST 418
FS ME+EFEE+ + ++ G T E+DV YLK+LL++AES K K+YRS V S S
Sbjct: 61 DDFSVMEEEFEEM-IASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSP 119
Query: 419 KYNQKK-MNPNLYCRRNHLIYQPR 487
KYNQKK MNPN CRRNH IYQPR
Sbjct: 120 KYNQKKYMNPNFNCRRNHHIYQPR 143
>TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 142
Score = 181 bits (457), Expect = 6e-046
Identities = 95/144 (65%), Positives = 108/144 (75%), Gaps = 11/144 (7%)
Frame = +2
Query: 80 MSTVVDRSVSTLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSEYE---- 247
M+ +DR +STLNPNAPVFDPV FREVEDFSPKWW+LVTTSKWFRDFWLSANSE E
Sbjct: 1 MTATIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGG 60
Query: 248 --FSDMEDEFEELTMTEAEMGGSTVTGNESDVGRYLKVLLSMAESRKGKLYRSNV-SYST 418
FS ME+EFEE+ A G ++ +DV YLK+LL++AES K K+YRS V S S
Sbjct: 61 DDFSVMEEEFEEMI---ASSDGGSMADTVTDVASYLKMLLNIAESTKEKIYRSKVSSCSP 117
Query: 419 KYNQKK-MNPNLYCRRNHLIYQPR 487
KYNQKK MNPN CRRNH IYQPR
Sbjct: 118 KYNQKKYMNPNFNCRRNHHIYQPR 141
>TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270098
FORWARD
Length = 121
Score = 71 bits (172), Expect = 7e-013
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 107 STLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSE 241
STLNP+AP+F P R+VEDFSP+WW+LVTTS W+ D+W+S +
Sbjct: 9 STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQ 53
>TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 71 bits (172), Expect = 7e-013
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 107 STLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSE 241
STLNP+AP+F P R+VEDFSP+WW+LVTTS W+ D+W+S +
Sbjct: 9 STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQ 53
>TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 71 bits (172), Expect = 7e-013
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 107 STLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSE 241
STLNP+AP+F P R+VEDFSP+WW+LVTTS W+ D+W+S +
Sbjct: 9 STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQ 53
>TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 71 bits (172), Expect = 7e-013
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 107 STLNPNAPVFDPVGFREVEDFSPKWWELVTTSKWFRDFWLSANSE 241
STLNP+AP+F P R+VEDFSP+WW+LVTTS W+ D+W+S +
Sbjct: 9 STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQ 53
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,473,873,593
Number of Sequences: 33410
Number of Extensions: 7473873593
Number of Successful Extensions: 254010249
Number of sequences better than 0.0: 0
|