BLASTX 7.6.2
Query= UN14244 /QuerySize=696
(695 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b... 292 2e-079
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 206 1e-053
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin... 184 5e-047
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA... 133 1e-031
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI... 133 1e-031
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi... 116 1e-026
TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b... 114 9e-026
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 113 1e-025
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 113 1e-025
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin... 86 3e-017
TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 50 1e-006
TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 50 1e-006
TAIR9_protein||AT3G27700.1 | Symbols: | RNA recognition motif (... 47 8e-006
TAIR9_protein||AT3G27700.2 | Symbols: | RNA recognition motif (... 47 8e-006
>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
chr4:13554983-13557763 REVERSE
Length = 416
Score = 292 bits (745), Expect = 2e-079
Identities = 135/153 (88%), Positives = 141/153 (92%), Gaps = 1/153 (0%)
Frame = +1
Query: 1 ETTQGNPGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANR 180
+ TQGN GE DP+NTTIFVGA+D+SVTED LKSVFGQFGELVHVKIPAGKRCGFVQ+ANR
Sbjct: 264 QNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANR 323
Query: 181 ACAEQGLNALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGYA 360
ACAEQ L+ LNGTQLGGQSIRLSWGRS SNKQ QPDQ QYGGGGGYYGYPPQGYE YGYA
Sbjct: 324 ACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA 383
Query: 361 PPPQDPNAYYGGYPGGGYGNYQQPGGGYQQQQQ 459
PPPQDPNAYYGGY GGGYGNYQQP GGYQQQQQ
Sbjct: 384 PPPQDPNAYYGGYAGGGYGNYQQP-GGYQQQQQ 415
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 206 bits (523), Expect = 1e-053
Identities = 106/146 (72%), Positives = 118/146 (80%), Gaps = 9/146 (6%)
Frame = +1
Query: 1 ETTQG-NPGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFAN 177
+ TQG N G+ DP+NTTIFVG LD +VT+D LKS+FGQFGEL+HVKIP GKRCGFVQ+AN
Sbjct: 245 QNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYAN 304
Query: 178 RACAEQGLNALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGY 357
+A AE L+ LNGTQLGGQSIRLSWGRS NKQ+ DQ Q+ GGGYYGYPPQ GYGY
Sbjct: 305 KASAEHALSVLNGTQLGGQSIRLSWGRS-PNKQS--DQAQW-NGGGYYGYPPQPQGGYGY 360
Query: 358 A--PPPQDPNAYYGGYPGGGYGNYQQ 429
A PP QDPNAYYGGY GYGNYQQ
Sbjct: 361 AAQPPTQDPNAYYGGYT--GYGNYQQ 384
>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917941 FORWARD
Length = 406
Score = 184 bits (466), Expect = 5e-047
Identities = 95/148 (64%), Positives = 109/148 (73%), Gaps = 11/148 (7%)
Frame = +1
Query: 25 EGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQGLN 204
+ DP+NTT+FVG LD SVT+D LK+VF Q+GE+VHVKIPAGKRCGFVQF+ ++CAE+ L
Sbjct: 255 DNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALR 314
Query: 205 ALNGTQLGGQSIRLSWGRSTSNKQA-QPDQGQYGGGGGYYGYPPQGYEGYGYAPPPQDPN 381
LNG QLGG ++RLSWGRS SNKQ+ P Q YGG G QG E YGY PQDPN
Sbjct: 315 MLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYG-------QGQEQYGYT-MPQDPN 366
Query: 382 AYYGGYPGGGY-GNYQQ-PGGGYQQQQQ 459
AYYGGY GGGY G YQQ P G Q QQ
Sbjct: 367 AYYGGYSGGGYSGGYQQTPQAGQQPPQQ 394
>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD
Length = 435
Score = 133 bits (334), Expect = 1e-031
Identities = 72/135 (53%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Frame = +1
Query: 25 EGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQGLN 204
EGD NTTIFVG LD SVT++ LK F +FGE+V VKIP GK CGFVQF NR AE+ L
Sbjct: 300 EGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 359
Query: 205 ALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPPPQDPNA 384
LNGT +G Q++RLSWGR+ +NKQ + G YYG Q Y GYGY P DP
Sbjct: 360 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQ-WVDPYYG--GQFYNGYGYMVPQPDPRM 416
Query: 385 YYGGYPGGGYGNYQQ 429
Y YG +QQ
Sbjct: 417 YPAAPYYPMYGGHQQ 431
>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD
Length = 433
Score = 133 bits (333), Expect = 1e-031
Identities = 72/135 (53%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Frame = +1
Query: 25 EGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQGLN 204
EGD NTTIFVG LD SVT++ LK F +FGE+V VKIP GK CGFVQF NR AE+ L
Sbjct: 298 EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 357
Query: 205 ALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPPPQDPNA 384
LNGT +G Q++RLSWGR+ +NKQ + G YYG Q Y GYGY P DP
Sbjct: 358 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQ-WVDPYYG--GQFYNGYGYMVPQPDPRM 414
Query: 385 YYGGYPGGGYGNYQQ 429
Y YG +QQ
Sbjct: 415 YPAAPYYPMYGGHQQ 429
>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE
Length = 446
Score = 116 bits (290), Expect = 1e-026
Identities = 66/125 (52%), Positives = 79/125 (63%), Gaps = 7/125 (5%)
Frame = +1
Query: 13 GNPGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAE 192
G+ +G+ +N+TIFVG LD VTE+ L F FGE+V VKIP GK CGFVQFANR AE
Sbjct: 317 GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAE 376
Query: 193 QGLNALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPPPQ 372
+ + LNGT +G ++RLSWGRS NKQ + D G GG G QGY GYA Q
Sbjct: 377 EAIGNLNGTVIGKNTVRLSWGRS-PNKQWRSDSGNQWNGGYSRG---QGYNN-GYA--NQ 429
Query: 373 DPNAY 387
D N Y
Sbjct: 430 DSNMY 434
>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
47B); RNA binding | chr3:6611398-6613823 REVERSE
Length = 436
Score = 114 bits (283), Expect = 9e-026
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Frame = +1
Query: 13 GNPGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAE 192
G+ +G+ +N TIFVG +D V ++ L+ F QFGE+V VKIP GK CGFVQFA+R AE
Sbjct: 311 GSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAE 370
Query: 193 QGLNALNGTQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPPPQ 372
+ +LNGT +G ++RLSWGRS NKQ + D GQ GG G+ GY G
Sbjct: 371 DAIESLNGTVIGKNTVRLSWGRS-PNKQWRGDSGQQWNGGYSRGH---GYNNGGGYANHH 426
Query: 373 DPNAYY 390
D N Y+
Sbjct: 427 DSNNYH 432
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 113 bits (281), Expect = 1e-025
Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 15/148 (10%)
Frame = +1
Query: 19 PGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQG 198
P E D + TTI V LD++VTE+ LK F Q GE+++VKIPA K G+VQF R AE+
Sbjct: 229 PPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEA 288
Query: 199 LNALNGTQLGGQSIRLSWGRSTSN----KQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPP 366
+ + G +G Q++R+SW ++ QA P+Q GYYGY QGY+ Y Y
Sbjct: 289 VQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQ-----WNGYYGY-GQGYDAYAYG-A 341
Query: 367 PQDPNAY-YGGYPGGGYGNYQQPGGGYQ 447
QDP+ Y YGGY GY Y Q G G Q
Sbjct: 342 TQDPSVYAYGGY---GYPQYPQQGEGTQ 366
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 113 bits (281), Expect = 1e-025
Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 15/148 (10%)
Frame = +1
Query: 19 PGEGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQG 198
P E D + TTI V LD++VTE+ LK F Q GE+++VKIPA K G+VQF R AE+
Sbjct: 225 PPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEA 284
Query: 199 LNALNGTQLGGQSIRLSWGRSTSN----KQAQPDQGQYGGGGGYYGYPPQGYEGYGYAPP 366
+ + G +G Q++R+SW ++ QA P+Q GYYGY QGY+ Y Y
Sbjct: 285 VQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQ-----WNGYYGY-GQGYDAYAYG-A 337
Query: 367 PQDPNAY-YGGYPGGGYGNYQQPGGGYQ 447
QDP+ Y YGGY GY Y Q G G Q
Sbjct: 338 TQDPSVYAYGGY---GYPQYPQQGEGTQ 362
>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917301 FORWARD
Length = 307
Score = 86 bits (210), Expect = 3e-017
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +1
Query: 25 EGDPSNTTIFVGALDESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANR 180
+ DP+NTT+FVG LD SVT+D LK+VF Q+GE+VHVKIPAGKRCGFVQF+ +
Sbjct: 255 DNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
>TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334829 FORWARD
Length = 301
Score = 50 bits (118), Expect = 1e-006
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 46 TIFVGALDESVTEDVLKSVFGQFGELVHV--KIPAGKRC-GFVQFANRACAEQGLNALNG 216
+I+VG L + E ++ +F ++G +V + K+P C FV+F + AE + +G
Sbjct: 8 SIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDG 67
Query: 217 TQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYG 324
L G +R+ + + +G YGGGG YG
Sbjct: 68 YNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYG 103
>TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334617 FORWARD
Length = 298
Score = 50 bits (118), Expect = 1e-006
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 46 TIFVGALDESVTEDVLKSVFGQFGELVHV--KIPAGKRC-GFVQFANRACAEQGLNALNG 216
+I+VG L + E ++ +F ++G +V + K+P C FV+F + AE + +G
Sbjct: 8 SIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDG 67
Query: 217 TQLGGQSIRLSWGRSTSNKQAQPDQGQYGGGGGYYG 324
L G +R+ + + +G YGGGG YG
Sbjct: 68 YNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYG 103
>TAIR9_protein||AT3G27700.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:10257681-10261330 REVERSE
Length = 909
Score = 47 bits (111), Expect = 8e-006
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 46 TIFVGAL-DESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQGLNALNGTQ 222
T+FV + ES D++ + F +FG+++ + IP FVQF+ R AE L A +
Sbjct: 439 TLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAESALRAPDAV- 497
Query: 223 LGGQSIRLSWGRSTSNKQAQPDQGQYGGGG 312
+G + I+L W +N+ + PD G G G
Sbjct: 498 MGNRFIKLWW----ANRDSIPDNGLSTGSG 523
>TAIR9_protein||AT3G27700.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:10257681-10261330 REVERSE
Length = 909
Score = 47 bits (111), Expect = 8e-006
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 46 TIFVGAL-DESVTEDVLKSVFGQFGELVHVKIPAGKRCGFVQFANRACAEQGLNALNGTQ 222
T+FV + ES D++ + F +FG+++ + IP FVQF+ R AE L A +
Sbjct: 439 TLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAESALRAPDAV- 497
Query: 223 LGGQSIRLSWGRSTSNKQAQPDQGQYGGGG 312
+G + I+L W +N+ + PD G G G
Sbjct: 498 MGNRFIKLWW----ANRDSIPDNGLSTGSG 523
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,473,873,593
Number of Sequences: 33410
Number of Extensions: 7473873593
Number of Successful Extensions: 254010249
Number of sequences better than 0.0: 0
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